RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 OMDQ99983 421 aa29.64■■■□□ 2.34
USP42-202ENST00000404008 HDAC8Q9BY41 377 aa29.64■■■□□ 2.34
USP42-202ENST00000404008 DYRK4Q9NR20 520 aa29.64■■■□□ 2.34
USP42-202ENST00000404008 FZD4Q9ULV1 537 aa29.64■■■□□ 2.34
USP42-202ENST00000404008 PLK4O00444 970 aa29.64■■■□□ 2.33
USP42-202ENST00000404008 TRAFD1O14545 582 aaPredicted RBP29.64■■■□□ 2.33
USP42-202ENST00000404008 OPHN1O60890 802 aa29.64■■■□□ 2.33
USP42-202ENST00000404008 SOCS5O75159 536 aa29.64■■■□□ 2.33
USP42-202ENST00000404008 GCATO75600 419 aa29.64■■■□□ 2.33
USP42-202ENST00000404008 SERPINF2P08697 491 aa29.64■■■□□ 2.33
USP42-202ENST00000404008 CD86P42081 329 aa29.64■■■□□ 2.33
USP42-202ENST00000404008 PARS2Q7L3T8 475 aaKnown RBP29.64■■■□□ 2.33
USP42-202ENST00000404008 HCAR2Q8TDS4 363 aa29.64■■■□□ 2.33
USP42-202ENST00000404008 GANCQ8TET4 914 aa29.64■■■□□ 2.33
USP42-202ENST00000404008 ZNF592Q92610 1267 aa29.64■■■□□ 2.33
USP42-202ENST00000404008 GBA3Q9H227 469 aa29.64■■■□□ 2.33
USP42-202ENST00000404008 DKK3Q9UBP4 350 aa29.64■■■□□ 2.33
USP42-202ENST00000404008 NCKAP1Q9Y2A7 1128 aa29.64■■■□□ 2.33
USP42-202ENST00000404008 PCDHGC4Q9Y5F7 938 aa29.64■■■□□ 2.33
USP42-202ENST00000404008 VPS13AQ96RL7 3174 aa29.63■■■□□ 2.33
USP42-202ENST00000404008 TSPAN11A1L157 253 aa29.63■■■□□ 2.33
USP42-202ENST00000404008 C16orf96A6NNT2 1141 aa29.63■■■□□ 2.33
USP42-202ENST00000404008 PDE2AO00408 941 aaPredicted RBP29.63■■■□□ 2.33
USP42-202ENST00000404008 PAFAH1B1P43034 410 aa29.63■■■□□ 2.33
USP42-202ENST00000404008 KCNJ1P48048 391 aa29.63■■■□□ 2.33
USP42-202ENST00000404008 SKOR1P84550 965 aa29.63■■■□□ 2.33
USP42-202ENST00000404008 TCF15Q12870 199 aa29.63■■■□□ 2.33
USP42-202ENST00000404008 TRAF2Q12933 501 aa29.63■■■□□ 2.33
USP42-202ENST00000404008 ITPRIPL1Q6GPH6 555 aa29.63■■■□□ 2.33
USP42-202ENST00000404008 TTC27Q6P3X3 843 aa29.63■■■□□ 2.33
USP42-202ENST00000404008 PRPF39Q86UA1 669 aaKnown RBP29.63■■■□□ 2.33
USP42-202ENST00000404008 FAM160A2Q8N612 972 aaPredicted RBP29.63■■■□□ 2.33
USP42-202ENST00000404008 FRMD1Q8N878 549 aa29.63■■■□□ 2.33
USP42-202ENST00000404008 MAGOHBQ96A72 148 aaKnown RBP29.63■■■□□ 2.33
USP42-202ENST00000404008 TADA1Q96BN2 335 aa29.63■■■□□ 2.33
USP42-202ENST00000404008 ECHDC3Q96DC8 303 aa29.63■■■□□ 2.33
USP42-202ENST00000404008 SPACA7Q96KW9 195 aa29.63■■■□□ 2.33
USP42-202ENST00000404008 RBM15Q96T37 977 aaKnown RBP eCLIP29.63■■■□□ 2.33
USP42-202ENST00000404008 NEUROG2Q9H2A3 272 aa29.63■■■□□ 2.33
USP42-202ENST00000404008 RSPH14Q9UHP6 348 aa29.63■■■□□ 2.33
USP42-202ENST00000404008 PCDHGA2Q9Y5H1 932 aa29.63■■■□□ 2.33
USP42-202ENST00000404008 IGHV1OR15-9A0A0B4J2B8 117 aa29.62■■■□□ 2.33
USP42-202ENST00000404008 HTRA2O43464 458 aaPredicted RBP29.62■■■□□ 2.33
USP42-202ENST00000404008 PHF2O75151 1096 aa29.62■■■□□ 2.33
USP42-202ENST00000404008 OXTRP30559 389 aa29.62■■■□□ 2.33
USP42-202ENST00000404008 PIP5KL1Q5T9C9 394 aa29.62■■■□□ 2.33
USP42-202ENST00000404008 AGBL4Q5VU57 503 aa29.62■■■□□ 2.33
USP42-202ENST00000404008 ERN2Q76MJ5 926 aaKnown RBP29.62■■■□□ 2.33
USP42-202ENST00000404008 FAM124AQ86V42 546 aa29.62■■■□□ 2.33
USP42-202ENST00000404008 FCRL5Q96RD9 977 aa29.62■■■□□ 2.33
USP42-202ENST00000404008 INVSQ9Y283 1065 aa29.62■■■□□ 2.33
USP42-202ENST00000404008 RAI2Q9Y5P3 530 aa29.62■■■□□ 2.33
USP42-202ENST00000404008 DMDP11532 3685 aa29.61■■■□□ 2.33
USP42-202ENST00000404008 H0Y858 1186 aa29.61■■■□□ 2.33
USP42-202ENST00000404008 NEK3P51956 506 aa29.61■■■□□ 2.33
USP42-202ENST00000404008 SLC14A2Q15849 920 aa29.61■■■□□ 2.33
USP42-202ENST00000404008 P3H1Q32P28 736 aa29.61■■■□□ 2.33
USP42-202ENST00000404008 BRAT1Q6PJG6 821 aa29.61■■■□□ 2.33
USP42-202ENST00000404008 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP29.61■■■□□ 2.33
USP42-202ENST00000404008 SPATA22Q8NHS9 363 aa29.61■■■□□ 2.33
USP42-202ENST00000404008 GAB3Q8WWW8 586 aa29.61■■■□□ 2.33
USP42-202ENST00000404008 SLC7A4O43246 635 aa29.6■■■□□ 2.33
USP42-202ENST00000404008 ADRB3P13945 408 aa29.6■■■□□ 2.33
USP42-202ENST00000404008 CD6P30203 668 aa29.6■■■□□ 2.33
USP42-202ENST00000404008 COILP38432 576 aaPredicted RBP29.6■■■□□ 2.33
USP42-202ENST00000404008 CFAP58Q5T655 872 aa29.6■■■□□ 2.33
USP42-202ENST00000404008 ARHGEF18Q6ZSZ5 1173 aa29.6■■■□□ 2.33
USP42-202ENST00000404008 ZSWIM9Q86XI8 627 aa29.6■■■□□ 2.33
USP42-202ENST00000404008 SPOCK2Q92563 424 aa29.6■■■□□ 2.33
USP42-202ENST00000404008 TOE1Q96GM8 510 aaKnown RBP29.6■■■□□ 2.33
USP42-202ENST00000404008 GORASP1Q9BQQ3 440 aa29.6■■■□□ 2.33
USP42-202ENST00000404008 TDRD1Q9BXT4 1180 aaKnown RBP29.6■■■□□ 2.33
USP42-202ENST00000404008 KCNH6Q9H252 994 aa29.6■■■□□ 2.33
USP42-202ENST00000404008 MBD1Q9UIS9 605 aaPredicted RBP29.6■■■□□ 2.33
USP42-202ENST00000404008 CEP192Q8TEP8 1941 aa29.6■■■□□ 2.33
USP42-202ENST00000404008 USP34Q70CQ2 3546 aa29.59■■■□□ 2.33
USP42-202ENST00000404008 F5H423 210 aaPredicted RBP29.59■■■□□ 2.33
USP42-202ENST00000404008 LILRB5O75023 590 aa29.59■■■□□ 2.33
USP42-202ENST00000404008 RPP40O75818 363 aaKnown RBP29.59■■■□□ 2.33
USP42-202ENST00000404008 MT-CYBP00156 380 aaPredicted RBP29.59■■■□□ 2.33
USP42-202ENST00000404008 IFNB1P01574 187 aa29.59■■■□□ 2.33
USP42-202ENST00000404008 CNR2P34972 360 aa29.59■■■□□ 2.33
USP42-202ENST00000404008 CCDC15Q0P6D6 951 aa29.59■■■□□ 2.33
USP42-202ENST00000404008 SRSF5Q13243 272 aaKnown RBP29.59■■■□□ 2.33
USP42-202ENST00000404008 FBXL19Q6PCT2 694 aa29.59■■■□□ 2.33
USP42-202ENST00000404008 CCDC137Q6PK04 289 aaKnown RBP29.59■■■□□ 2.33
USP42-202ENST00000404008 CCDC89Q8N998 374 aa29.59■■■□□ 2.33
USP42-202ENST00000404008 ATL2Q8NHH9 583 aa29.59■■■□□ 2.33
USP42-202ENST00000404008 PDCD6IPQ8WUM4 868 aaKnown RBP29.59■■■□□ 2.33
USP42-202ENST00000404008 OXNAD1Q96HP4 312 aaPredicted RBP29.59■■■□□ 2.33
USP42-202ENST00000404008 BTBD1Q9H0C5 482 aa29.59■■■□□ 2.33
USP42-202ENST00000404008 SGK2Q9HBY8 427 aa29.59■■■□□ 2.33
USP42-202ENST00000404008 WSB2Q9NYS7 404 aaPredicted RBP29.59■■■□□ 2.33
USP42-202ENST00000404008 MYO15AQ9UKN7 3530 aa29.59■■■□□ 2.33
USP42-202ENST00000404008 NUMA1Q14980 2115 aa29.58■■■□□ 2.33
USP42-202ENST00000404008 A0A1W2PQ67 120 aa29.58■■■□□ 2.33
USP42-202ENST00000404008 HRO43593 1189 aa29.58■■■□□ 2.33
USP42-202ENST00000404008 FZD6O60353 706 aa29.58■■■□□ 2.33
USP42-202ENST00000404008 URI1O94763 535 aaPredicted RBP29.58■■■□□ 2.33
USP42-202ENST00000404008 PGLSO95336 258 aa29.58■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms