RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 KAT6BQ8WYB5 2073 aa5.33□□□□□ -1.56
HMGB3P19-201ENST00000403971 CACNA1FO60840 1977 aa5.33□□□□□ -1.56
HMGB3P19-201ENST00000403971 COL5A2P05997 1499 aaPredicted RBP5.32□□□□□ -1.56
HMGB3P19-201ENST00000403971 SCN11AQ9UI33 1791 aa5.32□□□□□ -1.56
HMGB3P19-201ENST00000403971 KIR2DS5A0A0G2JLQ3 304 aa5.32□□□□□ -1.56
HMGB3P19-201ENST00000403971 CCDC196A0A1B0GTZ2 297 aa5.32□□□□□ -1.56
HMGB3P19-201ENST00000403971 OR6C68A6NDL8 312 aa5.32□□□□□ -1.56
HMGB3P19-201ENST00000403971 FOXO6A8MYZ6 492 aa5.32□□□□□ -1.56
HMGB3P19-201ENST00000403971 F8W810 466 aa5.32□□□□□ -1.56
HMGB3P19-201ENST00000403971 KIR2DS3K7RE56 304 aa5.32□□□□□ -1.56
HMGB3P19-201ENST00000403971 TNPO2O14787 897 aaKnown RBP5.32□□□□□ -1.56
HMGB3P19-201ENST00000403971 EPB41L2O43491 1005 aaKnown RBP5.32□□□□□ -1.56
HMGB3P19-201ENST00000403971 PPFIA2O75334 1257 aa5.32□□□□□ -1.56
HMGB3P19-201ENST00000403971 TULP3O75386 442 aa5.32□□□□□ -1.56
HMGB3P19-201ENST00000403971 CD4P01730 458 aa5.32□□□□□ -1.56
HMGB3P19-201ENST00000403971 CCT4P50991 539 aaKnown RBP5.32□□□□□ -1.56
HMGB3P19-201ENST00000403971 SMTNL2Q2TAL5 461 aa5.32□□□□□ -1.56
HMGB3P19-201ENST00000403971 MTX3Q5HYI7 312 aa5.32□□□□□ -1.56
HMGB3P19-201ENST00000403971 VWA5B1Q5TIE3 1220 aa5.32□□□□□ -1.56
HMGB3P19-201ENST00000403971 ACAD10Q6JQN1 1059 aa5.32□□□□□ -1.56
HMGB3P19-201ENST00000403971 HMBOX1Q6NT76 420 aa5.32□□□□□ -1.56
HMGB3P19-201ENST00000403971 SYCE2Q6PIF2 218 aa5.32□□□□□ -1.56
HMGB3P19-201ENST00000403971 SRRM1Q8IYB3 904 aaKnown RBP5.32□□□□□ -1.56
HMGB3P19-201ENST00000403971 GHDCQ8N2G8 530 aa5.32□□□□□ -1.56
HMGB3P19-201ENST00000403971 PCYOX1LQ8NBM8 494 aa5.32□□□□□ -1.56
HMGB3P19-201ENST00000403971 CMASQ8NFW8 434 aaPredicted RBP5.32□□□□□ -1.56
HMGB3P19-201ENST00000403971 CUL5Q93034 780 aa5.32□□□□□ -1.56
HMGB3P19-201ENST00000403971 PLEKHF1Q96S99 279 aa5.32□□□□□ -1.56
HMGB3P19-201ENST00000403971 IFT27Q9BW83 186 aa5.32□□□□□ -1.56
HMGB3P19-201ENST00000403971 INTS2Q9H0H0 1204 aaKnown RBP5.32□□□□□ -1.56
HMGB3P19-201ENST00000403971 SPAG4Q9NPE6 437 aa5.32□□□□□ -1.56
HMGB3P19-201ENST00000403971 THSD1Q9NS62 852 aa5.32□□□□□ -1.56
HMGB3P19-201ENST00000403971 ZNF69Q9UC07 566 aa5.32□□□□□ -1.56
HMGB3P19-201ENST00000403971 PLEKHB1Q9UF11 243 aaPredicted RBP5.32□□□□□ -1.56
HMGB3P19-201ENST00000403971 ANAPC4Q9UJX5 808 aa5.32□□□□□ -1.56
HMGB3P19-201ENST00000403971 AGO2Q9UKV8 859 aaKnown RBP5.32□□□□□ -1.56
HMGB3P19-201ENST00000403971 DHDHQ9UQ10 334 aa5.32□□□□□ -1.56
HMGB3P19-201ENST00000403971 SLIT2O94813 1529 aa5.32□□□□□ -1.56
HMGB3P19-201ENST00000403971 ADAMTS7Q9UKP4 1686 aa5.31□□□□□ -1.56
HMGB3P19-201ENST00000403971 MAPK8IP3Q9UPT6 1336 aa5.31□□□□□ -1.56
HMGB3P19-201ENST00000403971 A0A0G2JK05 382 aa5.31□□□□□ -1.56
HMGB3P19-201ENST00000403971 A6NNC1 897 aa5.31□□□□□ -1.56
HMGB3P19-201ENST00000403971 TLR2O60603 784 aa5.31□□□□□ -1.56
HMGB3P19-201ENST00000403971 URODP06132 367 aa5.31□□□□□ -1.56
HMGB3P19-201ENST00000403971 CHRM4P08173 479 aa5.31□□□□□ -1.56
HMGB3P19-201ENST00000403971 PRKAR2BP31323 418 aa5.31□□□□□ -1.56
HMGB3P19-201ENST00000403971 ELF1P32519 619 aa5.31□□□□□ -1.56
HMGB3P19-201ENST00000403971 HSPA1LP34931 641 aa5.31□□□□□ -1.56
HMGB3P19-201ENST00000403971 SKIV2L2P42285 1042 aaKnown RBP5.31□□□□□ -1.56
HMGB3P19-201ENST00000403971 CDH15P55291 814 aa5.31□□□□□ -1.56
HMGB3P19-201ENST00000403971 C21orf58P58505 322 aa5.31□□□□□ -1.56
HMGB3P19-201ENST00000403971 BAK1Q16611 211 aa5.31□□□□□ -1.56
HMGB3P19-201ENST00000403971 SYTL3Q4VX76 610 aa5.31□□□□□ -1.56
HMGB3P19-201ENST00000403971 ZNF667Q5HYK9 610 aa5.31□□□□□ -1.56
HMGB3P19-201ENST00000403971 TTLL5Q6EMB2 1281 aa5.31□□□□□ -1.56
HMGB3P19-201ENST00000403971 ISM2Q6H9L7 571 aa5.31□□□□□ -1.56
HMGB3P19-201ENST00000403971 H1FNTQ75WM6 255 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P19-201ENST00000403971 TRIM74Q86UV6 250 aa5.31□□□□□ -1.56
HMGB3P19-201ENST00000403971 TRIM73Q86UV7 250 aa5.31□□□□□ -1.56
HMGB3P19-201ENST00000403971 PLD5Q8N7P1 536 aa5.31□□□□□ -1.56
HMGB3P19-201ENST00000403971 FAR1Q8WVX9 515 aa5.31□□□□□ -1.56
HMGB3P19-201ENST00000403971 HSPH1Q92598 858 aa5.31□□□□□ -1.56
HMGB3P19-201ENST00000403971 SH3KBP1Q96B97 665 aa5.31□□□□□ -1.56
HMGB3P19-201ENST00000403971 FRG2BQ96QU4 278 aa5.31□□□□□ -1.56
HMGB3P19-201ENST00000403971 TUBB6Q9BUF5 446 aa5.31□□□□□ -1.56
HMGB3P19-201ENST00000403971 MAF1Q9H063 256 aa5.31□□□□□ -1.56
HMGB3P19-201ENST00000403971 ACTR5Q9H9F9 607 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P19-201ENST00000403971 PREBQ9HCU5 417 aa5.31□□□□□ -1.56
HMGB3P19-201ENST00000403971 SEMA4BQ9NPR2 832 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P19-201ENST00000403971 NRIP3Q9NQ35 241 aa5.31□□□□□ -1.56
HMGB3P19-201ENST00000403971 MSRB1Q9NZV6 116 aa5.31□□□□□ -1.56
HMGB3P19-201ENST00000403971 CDH22Q9UJ99 828 aa5.31□□□□□ -1.56
HMGB3P19-201ENST00000403971 OSGIN2Q9Y236 505 aa5.31□□□□□ -1.56
HMGB3P19-201ENST00000403971 TMEM98Q9Y2Y6 226 aa5.31□□□□□ -1.56
HMGB3P19-201ENST00000403971 SHANK3Q9BYB0 1731 aa5.31□□□□□ -1.56
HMGB3P19-201ENST00000403971 ZNF521Q96K83 1311 aa5.3□□□□□ -1.56
HMGB3P19-201ENST00000403971 SIPA1L3O60292 1781 aaPredicted RBP5.3□□□□□ -1.56
HMGB3P19-201ENST00000403971 TRBV5-7A0A0A0MS05 114 aa5.3□□□□□ -1.56
HMGB3P19-201ENST00000403971 SPTLC2O15270 562 aa5.3□□□□□ -1.56
HMGB3P19-201ENST00000403971 CEP104O60308 925 aa5.3□□□□□ -1.56
HMGB3P19-201ENST00000403971 GUCY1B2O75343 617 aa5.3□□□□□ -1.56
HMGB3P19-201ENST00000403971 MBD4O95243 580 aa5.3□□□□□ -1.56
HMGB3P19-201ENST00000403971 TBX18O95935 607 aa5.3□□□□□ -1.56
HMGB3P19-201ENST00000403971 ADAP00813 363 aa5.3□□□□□ -1.56
HMGB3P19-201ENST00000403971 HMOX1P09601 288 aa5.3□□□□□ -1.56
HMGB3P19-201ENST00000403971 CHRNB1P11230 501 aa5.3□□□□□ -1.56
HMGB3P19-201ENST00000403971 KRT9P35527 623 aa5.3□□□□□ -1.56
HMGB3P19-201ENST00000403971 ABCG1P45844 678 aa5.3□□□□□ -1.56
HMGB3P19-201ENST00000403971 CASP6P55212 293 aa5.3□□□□□ -1.56
HMGB3P19-201ENST00000403971 PKP1Q13835 747 aa5.3□□□□□ -1.56
HMGB3P19-201ENST00000403971 EZH2Q15910 746 aaKnown RBP5.3□□□□□ -1.56
HMGB3P19-201ENST00000403971 RPE65Q16518 533 aa5.3□□□□□ -1.56
HMGB3P19-201ENST00000403971 ALG10Q5BKT4 473 aa5.3□□□□□ -1.56
HMGB3P19-201ENST00000403971 ZNF766Q5HY98 468 aa5.3□□□□□ -1.56
HMGB3P19-201ENST00000403971 ALG10BQ5I7T1 473 aa5.3□□□□□ -1.56
HMGB3P19-201ENST00000403971 FAM69AQ5T7M9 428 aa5.3□□□□□ -1.56
HMGB3P19-201ENST00000403971 ASPHD1Q5U4P2 390 aa5.3□□□□□ -1.56
HMGB3P19-201ENST00000403971 TMEM268Q5VZI3 342 aa5.3□□□□□ -1.56
HMGB3P19-201ENST00000403971 DPY19L2P1Q6NXN4 242 aa5.3□□□□□ -1.56
HMGB3P19-201ENST00000403971 AAGABQ6PD74 315 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms