RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 ANKMY2Q8IV38 441 aa19.22■□□□□ 0.67
TSPAN4-204ENST00000397404 HCAR2Q8TDS4 363 aa19.22■□□□□ 0.67
TSPAN4-204ENST00000397404 CSGALNACT1Q8TDX6 532 aa19.22■□□□□ 0.67
TSPAN4-204ENST00000397404 ZNF641Q96N77 438 aaPredicted RBP19.22■□□□□ 0.67
TSPAN4-204ENST00000397404 PHF7Q9BWX1 381 aaPredicted RBP19.22■□□□□ 0.67
TSPAN4-204ENST00000397404 TRABDQ9H4I3 376 aa19.22■□□□□ 0.67
TSPAN4-204ENST00000397404 BRD9Q9H8M2 597 aa19.22■□□□□ 0.67
TSPAN4-204ENST00000397404 ELOVL2Q9NXB9 296 aa19.22■□□□□ 0.67
TSPAN4-204ENST00000397404 NSMCE4AQ9NXX6 385 aa19.22■□□□□ 0.67
TSPAN4-204ENST00000397404 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.22■□□□□ 0.67
TSPAN4-204ENST00000397404 WASH3PC4AMC7 463 aa19.21■□□□□ 0.67
TSPAN4-204ENST00000397404 AGPSO00116 658 aa19.21■□□□□ 0.67
TSPAN4-204ENST00000397404 SOX1O00570 391 aaPredicted RBP19.21■□□□□ 0.67
TSPAN4-204ENST00000397404 MBTPS2O43462 519 aa19.21■□□□□ 0.67
TSPAN4-204ENST00000397404 AGTP01019 485 aa19.21■□□□□ 0.67
TSPAN4-204ENST00000397404 GLULP15104 373 aa19.21■□□□□ 0.67
TSPAN4-204ENST00000397404 GJA4P35212 333 aa19.21■□□□□ 0.67
TSPAN4-204ENST00000397404 GRIA2P42262 883 aa19.21■□□□□ 0.67
TSPAN4-204ENST00000397404 GRIA4P48058 902 aa19.21■□□□□ 0.67
TSPAN4-204ENST00000397404 GPX6P59796 221 aa19.21■□□□□ 0.67
TSPAN4-204ENST00000397404 BCL2L1Q07817 233 aa19.21■□□□□ 0.67
TSPAN4-204ENST00000397404 ZNF844Q08AG5 666 aa19.21■□□□□ 0.67
TSPAN4-204ENST00000397404 SPARCL1Q14515 664 aa19.21■□□□□ 0.67
TSPAN4-204ENST00000397404 KRT71Q3SY84 523 aa19.21■□□□□ 0.67
TSPAN4-204ENST00000397404 ASTLQ6HA08 431 aaPredicted RBP19.21■□□□□ 0.67
TSPAN4-204ENST00000397404 LEKR1Q6ZMV7 388 aa19.21■□□□□ 0.67
TSPAN4-204ENST00000397404 TERB1Q8NA31 727 aa19.21■□□□□ 0.67
TSPAN4-204ENST00000397404 DNASE1L2Q92874 299 aa19.21■□□□□ 0.67
TSPAN4-204ENST00000397404 HLA-CQ95604 372 aa19.21■□□□□ 0.67
TSPAN4-204ENST00000397404 TRIB3Q96RU7 358 aa19.21■□□□□ 0.67
TSPAN4-204ENST00000397404 OSBPL1AQ9BXW6 950 aa19.21■□□□□ 0.67
TSPAN4-204ENST00000397404 FAM53CQ9NYF3 392 aa19.21■□□□□ 0.67
TSPAN4-204ENST00000397404 CDH22Q9UJ99 828 aa19.21■□□□□ 0.67
TSPAN4-204ENST00000397404 FCF1Q9Y324 198 aaKnown RBP19.21■□□□□ 0.67
TSPAN4-204ENST00000397404 RAI2Q9Y5P3 530 aa19.21■□□□□ 0.67
TSPAN4-204ENST00000397404 IKBKGQ9Y6K9 419 aa19.21■□□□□ 0.67
TSPAN4-204ENST00000397404 NUMBLQ9Y6R0 609 aa19.21■□□□□ 0.67
TSPAN4-204ENST00000397404 TCRBV9S1A1TA0A576 114 aa19.2■□□□□ 0.66
TSPAN4-204ENST00000397404 HMGB1P1B2RPK0 211 aaPredicted RBP19.2■□□□□ 0.66
TSPAN4-204ENST00000397404 F5H423 210 aaPredicted RBP19.2■□□□□ 0.66
TSPAN4-204ENST00000397404 ARNTLO00327 626 aa19.2■□□□□ 0.66
TSPAN4-204ENST00000397404 MT-CO1P00395 513 aa19.2■□□□□ 0.66
TSPAN4-204ENST00000397404 CRYMQ14894 314 aa19.2■□□□□ 0.66
TSPAN4-204ENST00000397404 PCSK7Q16549 785 aa19.2■□□□□ 0.66
TSPAN4-204ENST00000397404 GAB4Q2WGN9 574 aa19.2■□□□□ 0.66
TSPAN4-204ENST00000397404 CARD16Q5EG05 197 aa19.2■□□□□ 0.66
TSPAN4-204ENST00000397404 ARMC12Q5T9G4 340 aa19.2■□□□□ 0.66
TSPAN4-204ENST00000397404 AGBL2Q5U5Z8 902 aa19.2■□□□□ 0.66
TSPAN4-204ENST00000397404 PKN3Q6P5Z2 889 aa19.2■□□□□ 0.66
TSPAN4-204ENST00000397404 UNC5AQ6ZN44 842 aa19.2■□□□□ 0.66
TSPAN4-204ENST00000397404 LMNTD2Q8IXW0 634 aa19.2■□□□□ 0.66
TSPAN4-204ENST00000397404 NAT16Q8N8M0 369 aa19.2■□□□□ 0.66
TSPAN4-204ENST00000397404 BRSK1Q8TDC3 778 aa19.2■□□□□ 0.66
TSPAN4-204ENST00000397404 KCNV2Q8TDN2 545 aa19.2■□□□□ 0.66
TSPAN4-204ENST00000397404 KXD1Q9BQD3 176 aa19.2■□□□□ 0.66
TSPAN4-204ENST00000397404 WDR83Q9BRX9 315 aaKnown RBP19.2■□□□□ 0.66
TSPAN4-204ENST00000397404 SYBUQ9NX95 663 aa19.2■□□□□ 0.66
TSPAN4-204ENST00000397404 MOCS1Q9NZB8 636 aa19.2■□□□□ 0.66
TSPAN4-204ENST00000397404 TCAF1Q9Y4C2 921 aa19.2■□□□□ 0.66
TSPAN4-204ENST00000397404 RPS6KL1Q9Y6S9 549 aa19.2■□□□□ 0.66
TSPAN4-204ENST00000397404 FAM169AQ9Y6X4 670 aa19.2■□□□□ 0.66
TSPAN4-204ENST00000397404 MIA3Q5JRA6 1907 aa19.2■□□□□ 0.66
TSPAN4-204ENST00000397404 MYOFQ9NZM1 2061 aa19.2■□□□□ 0.66
TSPAN4-204ENST00000397404 HTRA2O43464 458 aaPredicted RBP19.19■□□□□ 0.66
TSPAN4-204ENST00000397404 USP12O75317 370 aa19.19■□□□□ 0.66
TSPAN4-204ENST00000397404 CRTAMO95727 393 aa19.19■□□□□ 0.66
TSPAN4-204ENST00000397404 ATXN1LP0C7T5 689 aaKnown RBP19.19■□□□□ 0.66
TSPAN4-204ENST00000397404 FOSL2P15408 326 aa19.19■□□□□ 0.66
TSPAN4-204ENST00000397404 KCNA5P22460 613 aa19.19■□□□□ 0.66
TSPAN4-204ENST00000397404 POLR2LP62875 67 aaKnown RBP19.19■□□□□ 0.66
TSPAN4-204ENST00000397404 PFKPQ01813 784 aa19.19■□□□□ 0.66
TSPAN4-204ENST00000397404 DLG2Q15700 870 aa19.19■□□□□ 0.66
TSPAN4-204ENST00000397404 GEN1Q17RS7 908 aa19.19■□□□□ 0.66
TSPAN4-204ENST00000397404 SIRPB2Q5JXA9 342 aa19.19■□□□□ 0.66
TSPAN4-204ENST00000397404 LGSNQ5TDP6 509 aa19.19■□□□□ 0.66
TSPAN4-204ENST00000397404 LRRC6Q86X45 466 aa19.19■□□□□ 0.66
TSPAN4-204ENST00000397404 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.19■□□□□ 0.66
TSPAN4-204ENST00000397404 SCG3Q8WXD2 468 aaKnown RBP19.19■□□□□ 0.66
TSPAN4-204ENST00000397404 LRCH3Q96II8 777 aa19.19■□□□□ 0.66
TSPAN4-204ENST00000397404 ZFYVE19Q96K21 471 aa19.19■□□□□ 0.66
TSPAN4-204ENST00000397404 CDX2Q99626 313 aaPredicted RBP19.19■□□□□ 0.66
TSPAN4-204ENST00000397404 C8orf33Q9H7E9 229 aaPredicted RBP19.19■□□□□ 0.66
TSPAN4-204ENST00000397404 OGFRQ9NZT2 677 aa19.19■□□□□ 0.66
TSPAN4-204ENST00000397404 VPS18Q9P253 973 aa19.19■□□□□ 0.66
TSPAN4-204ENST00000397404 RABGEF1Q9UJ41 708 aa19.19■□□□□ 0.66
TSPAN4-204ENST00000397404 STARD13Q9Y3M8 1113 aa19.19■□□□□ 0.66
TSPAN4-204ENST00000397404 KIAA1549LQ6ZVL6 1849 aa19.19■□□□□ 0.66
TSPAN4-204ENST00000397404 BRWD1Q9NSI6 2320 aa19.18■□□□□ 0.66
TSPAN4-204ENST00000397404 ANKRD66B4E2M5 251 aa19.18■□□□□ 0.66
TSPAN4-204ENST00000397404 FZD6O60353 706 aa19.18■□□□□ 0.66
TSPAN4-204ENST00000397404 APODP05090 189 aa19.18■□□□□ 0.66
TSPAN4-204ENST00000397404 CNTFP26441 200 aa19.18■□□□□ 0.66
TSPAN4-204ENST00000397404 SSTR1P30872 391 aa19.18■□□□□ 0.66
TSPAN4-204ENST00000397404 RGRP47804 291 aa19.18■□□□□ 0.66
TSPAN4-204ENST00000397404 SMAD2Q15796 467 aaKnown RBP19.18■□□□□ 0.66
TSPAN4-204ENST00000397404 MYLK3Q32MK0 819 aa19.18■□□□□ 0.66
TSPAN4-204ENST00000397404 LEXMQ3ZCV2 418 aa19.18■□□□□ 0.66
TSPAN4-204ENST00000397404 ANKRD20A4Q4UJ75 823 aa19.18■□□□□ 0.66
TSPAN4-204ENST00000397404 PDPK2PQ6A1A2 396 aa19.18■□□□□ 0.66
TSPAN4-204ENST00000397404 TAOK1Q7L7X3 1001 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms