RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 NLRP9Q7RTR0 991 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 SUGP1Q8IWZ8 645 aaKnown RBP13.74□□□□□ -0.21
MCF2L-209ENST00000397036 MPP5Q8N3R9 675 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 RIBC1Q8N443 379 aaPredicted RBP13.74□□□□□ -0.21
MCF2L-209ENST00000397036 IFT43Q96FT9 208 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 PGM2Q96G03 612 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 MRGPRX3Q96LB0 322 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 CYTH2Q99418 400 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 KXD1Q9BQD3 176 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 TDRD1Q9BXT4 1180 aaKnown RBP13.74□□□□□ -0.21
MCF2L-209ENST00000397036 VPS37BQ9H9H4 285 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 ELOVL2Q9NXB9 296 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 PRKAG3Q9UGI9 489 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 SLC24A2Q9UI40 661 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 RABGEF1Q9UJ41 708 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 SLC8A2Q9UPR5 921 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 ERVW-1Q9UQF0 538 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 MAD1L1Q9Y6D9 718 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 FAM169AQ9Y6X4 670 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 DENND4AQ7Z401 1863 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 A0A1W2PQ67 120 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 TCRBV9S1A1TA0A576 114 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 H3BQ06 376 aaPredicted RBP13.74□□□□□ -0.21
MCF2L-209ENST00000397036 RASGRF2O14827 1237 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 PAPSS2O95340 614 aaPredicted RBP13.74□□□□□ -0.21
MCF2L-209ENST00000397036 POP4O95707 220 aaKnown RBP13.74□□□□□ -0.21
MCF2L-209ENST00000397036 SYF2O95926 243 aaKnown RBP13.74□□□□□ -0.21
MCF2L-209ENST00000397036 C1QAP02745 245 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 OPRD1P41143 372 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 CTSOP43234 321 aaPredicted RBP13.74□□□□□ -0.21
MCF2L-209ENST00000397036 OLIG2Q13516 323 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 DLG2Q15700 870 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 KLHL38Q2WGJ6 581 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 HSP90B2PQ58FF3 399 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 CARD16Q5EG05 197 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 HP1BP3Q5SSJ5 553 aaPredicted RBP13.74□□□□□ -0.21
MCF2L-209ENST00000397036 CEP85LQ5SZL2 805 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 CERCAMQ5T4B2 595 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 UBAP2Q5T6F2 1119 aaKnown RBP13.74□□□□□ -0.21
MCF2L-209ENST00000397036 C22orf39Q6P5X5 142 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 PKN3Q6P5Z2 889 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 NUDT18Q6ZVK8 323 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 C12orf40Q86WS4 652 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 FRS2Q8WU20 508 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 NSMCE3Q96MG7 304 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 FAM161BQ96MY7 647 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 C19orf43Q9BQ61 176 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 RPP25Q9BUL9 199 aaKnown RBP13.74□□□□□ -0.21
MCF2L-209ENST00000397036 PHF7Q9BWX1 381 aaPredicted RBP13.74□□□□□ -0.21
MCF2L-209ENST00000397036 ADGRE3Q9BY15 652 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 TMBIM4Q9HC24 238 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 SYBUQ9NX95 663 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 RAI2Q9Y5P3 530 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 NUMBLQ9Y6R0 609 aa13.74□□□□□ -0.21
MCF2L-209ENST00000397036 HEATR9A2RTY3 570 aa13.73□□□□□ -0.21
MCF2L-209ENST00000397036 GOLGA6L10A6NI86 522 aa13.73□□□□□ -0.21
MCF2L-209ENST00000397036 CDH16O75309 829 aa13.73□□□□□ -0.21
MCF2L-209ENST00000397036 MYZAPP0CAP1 466 aa13.73□□□□□ -0.21
MCF2L-209ENST00000397036 KCNA5P22460 613 aa13.73□□□□□ -0.21
MCF2L-209ENST00000397036 PSMA3P25788 255 aa13.73□□□□□ -0.21
MCF2L-209ENST00000397036 RAD51Q06609 339 aa13.73□□□□□ -0.21
MCF2L-209ENST00000397036 GRM2Q14416 872 aa13.73□□□□□ -0.21
MCF2L-209ENST00000397036 PCSK7Q16549 785 aa13.73□□□□□ -0.21
MCF2L-209ENST00000397036 MYLK3Q32MK0 819 aa13.73□□□□□ -0.21
MCF2L-209ENST00000397036 ANKRD20A4Q4UJ75 823 aa13.73□□□□□ -0.21
MCF2L-209ENST00000397036 TNFAIP8L3Q5GJ75 292 aa13.73□□□□□ -0.21
MCF2L-209ENST00000397036 SIRPB2Q5JXA9 342 aa13.73□□□□□ -0.21
MCF2L-209ENST00000397036 CASC4Q6P4E1 433 aa13.73□□□□□ -0.21
MCF2L-209ENST00000397036 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.73□□□□□ -0.21
MCF2L-209ENST00000397036 GOLGA6L1Q8N7Z2 621 aa13.73□□□□□ -0.21
MCF2L-209ENST00000397036 TERB1Q8NA31 727 aa13.73□□□□□ -0.21
MCF2L-209ENST00000397036 OR2W6PQ8NHA6 318 aa13.73□□□□□ -0.21
MCF2L-209ENST00000397036 FBF1Q8TES7 1133 aa13.73□□□□□ -0.21
MCF2L-209ENST00000397036 MYO19Q96H55 970 aa13.73□□□□□ -0.21
MCF2L-209ENST00000397036 LRIG1Q96JA1 1093 aa13.73□□□□□ -0.21
MCF2L-209ENST00000397036 RPL10LQ96L21 214 aaKnown RBP13.73□□□□□ -0.21
MCF2L-209ENST00000397036 SRPK1Q96SB4 655 aaKnown RBP13.73□□□□□ -0.21
MCF2L-209ENST00000397036 APOL2Q9BQE5 337 aa13.73□□□□□ -0.21
MCF2L-209ENST00000397036 DHRS4Q9BTZ2 278 aa13.73□□□□□ -0.21
MCF2L-209ENST00000397036 VPS18Q9P253 973 aa13.73□□□□□ -0.21
MCF2L-209ENST00000397036 SLCO3A1Q9UIG8 710 aa13.73□□□□□ -0.21
MCF2L-209ENST00000397036 TCAF1Q9Y4C2 921 aa13.73□□□□□ -0.21
MCF2L-209ENST00000397036 TTC24A2A3L6 582 aaPredicted RBP13.72□□□□□ -0.21
MCF2L-209ENST00000397036 FAM159BA6NKW6 160 aa13.72□□□□□ -0.21
MCF2L-209ENST00000397036 ANKRD66B4E2M5 251 aa13.72□□□□□ -0.21
MCF2L-209ENST00000397036 GOLGA8KD6RF30 607 aa13.72□□□□□ -0.21
MCF2L-209ENST00000397036 TRAFD1O14545 582 aaPredicted RBP13.72□□□□□ -0.21
MCF2L-209ENST00000397036 TRIM24O15164 1050 aa13.72□□□□□ -0.21
MCF2L-209ENST00000397036 TPH1P17752 444 aa13.72□□□□□ -0.21
MCF2L-209ENST00000397036 GRIA2P42262 883 aa13.72□□□□□ -0.21
MCF2L-209ENST00000397036 CHRNA4P43681 627 aa13.72□□□□□ -0.21
MCF2L-209ENST00000397036 SLC6A11P48066 632 aa13.72□□□□□ -0.21
MCF2L-209ENST00000397036 STK19P49842 368 aaPredicted RBP13.72□□□□□ -0.21
MCF2L-209ENST00000397036 MTM1Q13496 603 aa13.72□□□□□ -0.21
MCF2L-209ENST00000397036 NAB1Q13506 487 aa13.72□□□□□ -0.21
MCF2L-209ENST00000397036 CRYMQ14894 314 aa13.72□□□□□ -0.21
MCF2L-209ENST00000397036 SMAD2Q15796 467 aaKnown RBP13.72□□□□□ -0.21
MCF2L-209ENST00000397036 PTPRNQ16849 979 aa13.72□□□□□ -0.21
MCF2L-209ENST00000397036 PUS10Q3MIT2 529 aaKnown RBP13.72□□□□□ -0.21
MCF2L-209ENST00000397036 LEXMQ3ZCV2 418 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms