RNA–Protein interactions for RNA: ENST00000397013.2

NUP98-206, Transcript of nucleoporin 98, humanhuman

TSL 5

Gene NUP98, Length 939 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-206ENST00000397013 CNTN6Q9UQ52 1028 aa8.18□□□□□ -1.1
NUP98-206ENST00000397013 ITM2BQ9Y287 266 aa8.18□□□□□ -1.1
NUP98-206ENST00000397013 TBC1D30Q9Y2I9 924 aa8.18□□□□□ -1.1
NUP98-206ENST00000397013 SPTY2D1-AS1A0A0U1RR47 76 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 A0A1W2PQ27 194 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 A0A1W2PQ64 194 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 EME2A4GXA9 379 aaPredicted RBP8.17□□□□□ -1.1
NUP98-206ENST00000397013 BECN2A8MW95 431 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 ALOX15BO15296 676 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 AQP9O43315 295 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 THAP12O43422 761 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 CD160O95971 181 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 ERBB2P04626 1255 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 GP1BAP07359 652 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 HSP90AA1P07900 732 aaKnown RBP8.17□□□□□ -1.1
NUP98-206ENST00000397013 THBS1P07996 1170 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 ALPPL2P10696 532 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 ITGB6P18564 788 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 WT1P19544 449 aaPredicted RBP8.17□□□□□ -1.1
NUP98-206ENST00000397013 BMP6P22004 513 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 CCR1P32246 355 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 NUDT1P36639 197 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 ACADSBP45954 432 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 DNA2P51530 1060 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 UCNP55089 124 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 STX17P56962 302 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 CYP4F2P78329 520 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 KRT85P78386 507 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 CDK17Q00537 523 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 SRSF1Q07955 248 aaKnown RBP eCLIP8.17□□□□□ -1.12e-9■■□□□ 12.6
NUP98-206ENST00000397013 PDCLQ13371 301 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 PDE1CQ14123 709 aaPredicted RBP8.17□□□□□ -1.1
NUP98-206ENST00000397013 STILQ15468 1287 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 C5orf22Q49AR2 442 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 CCDC40Q4G0X9 1142 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 RAB6CQ53S08 254 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 LRRC73Q5JTD7 316 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 COLEC12Q5KU26 742 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 KCTD16Q68DU8 428 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 KLHL10Q6JEL2 608 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 LEKR1Q6ZMV7 388 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 FAM183BPQ6ZVS7 135 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 SFTPA2Q8IWL1 248 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 SLC35F3Q8IY50 421 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 FMR1NBQ8N0W7 255 aaPredicted RBP8.17□□□□□ -1.1
NUP98-206ENST00000397013 OR6K2Q8NGY2 324 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 EXTL1Q92935 676 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 FUBP1Q96AE4 644 aaKnown RBP8.17□□□□□ -1.1
NUP98-206ENST00000397013 MED15Q96RN5 788 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 CRACR2AQ9BSW2 395 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 SPON2Q9BUD6 331 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 HDAC8Q9BY41 377 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 FOXP3Q9BZS1 431 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 CLPBQ9H078 707 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 INTS2Q9H0H0 1204 aaKnown RBP8.17□□□□□ -1.1
NUP98-206ENST00000397013 RAB6CQ9H0N0 254 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 SYNDIG1Q9H7V2 258 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 PLCB1Q9NQ66 1216 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 PIGVQ9NUD9 493 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 IL36AQ9UHA7 158 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 IL17BQ9UHF5 180 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 AJAP1Q9UKB5 411 aaPredicted RBP8.17□□□□□ -1.1
NUP98-206ENST00000397013 ATXN7L1Q9ULK2 861 aaPredicted RBP8.17□□□□□ -1.1
NUP98-206ENST00000397013 HS3ST2Q9Y278 367 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 FADS3Q9Y5Q0 445 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 HS3ST3A1Q9Y663 406 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 KCNMB2Q9Y691 235 aa8.17□□□□□ -1.1
NUP98-206ENST00000397013 NEMP2A6NFY4 417 aa8.16□□□□□ -1.1
NUP98-206ENST00000397013 CAPN8A6NHC0 703 aa8.16□□□□□ -1.1
NUP98-206ENST00000397013 A6NNZ2 444 aa8.16□□□□□ -1.1
NUP98-206ENST00000397013 M0QYT0 321 aa8.16□□□□□ -1.1
NUP98-206ENST00000397013 PMM2O15305 246 aa8.16□□□□□ -1.1
NUP98-206ENST00000397013 YY2O15391 372 aa8.16□□□□□ -1.1
NUP98-206ENST00000397013 SART1O43290 800 aaKnown RBP8.16□□□□□ -1.1
NUP98-206ENST00000397013 CLDN11O75508 207 aa8.16□□□□□ -1.1
NUP98-206ENST00000397013 ZMPSTE24O75844 475 aa8.16□□□□□ -1.1
NUP98-206ENST00000397013 RHOCP08134 193 aa8.16□□□□□ -1.1
NUP98-206ENST00000397013 FAM87AP0C7U9 286 aa8.16□□□□□ -1.1
NUP98-206ENST00000397013 PNMA6AP0CW24 399 aaPredicted RBP8.16□□□□□ -1.1
NUP98-206ENST00000397013 ADRB3P13945 408 aa8.16□□□□□ -1.1
NUP98-206ENST00000397013 NME1P15531 152 aaKnown RBP8.16□□□□□ -1.1
NUP98-206ENST00000397013 SLC9A1P19634 815 aa8.16□□□□□ -1.1
NUP98-206ENST00000397013 ACVRL1P37023 503 aa8.16□□□□□ -1.1
NUP98-206ENST00000397013 USP8P40818 1118 aa8.16□□□□□ -1.1
NUP98-206ENST00000397013 DUSP3P51452 185 aaPredicted RBP8.16□□□□□ -1.1
NUP98-206ENST00000397013 CDH4P55283 916 aa8.16□□□□□ -1.1
NUP98-206ENST00000397013 RNASE9P60153 205 aaKnown RBP8.16□□□□□ -1.1
NUP98-206ENST00000397013 HNRNPKP61978 463 aaKnown RBP eCLIP8.16□□□□□ -1.1
NUP98-206ENST00000397013 GCNT1Q02742 428 aa8.16□□□□□ -1.1
NUP98-206ENST00000397013 ARHGAP44Q17R89 818 aa8.16□□□□□ -1.1
NUP98-206ENST00000397013 PRRT3Q5FWE3 981 aa8.16□□□□□ -1.1
NUP98-206ENST00000397013 TTI2Q6NXR4 508 aa8.16□□□□□ -1.1
NUP98-206ENST00000397013 ZCCHC8Q6NZY4 707 aaKnown RBP8.16□□□□□ -1.1
NUP98-206ENST00000397013 NEK5Q6P3R8 708 aa8.16□□□□□ -1.1
NUP98-206ENST00000397013 C22orf39Q6P5X5 142 aa8.16□□□□□ -1.1
NUP98-206ENST00000397013 OLFML1Q6UWY5 402 aa8.16□□□□□ -1.1
NUP98-206ENST00000397013 KYAT3Q6YP21 454 aaKnown RBP8.16□□□□□ -1.1
NUP98-206ENST00000397013 RBM44Q6ZP01 1051 aaKnown RBP8.16□□□□□ -1.1
NUP98-206ENST00000397013 PARS2Q7L3T8 475 aaKnown RBP8.16□□□□□ -1.1
NUP98-206ENST00000397013 LURAP1LQ8IV03 231 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms