RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 CXCL11O14625 94 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 POU1F1P28069 291 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 HPCAL1P37235 193 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 RAB25P57735 213 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 NFE2Q16621 373 aaPredicted RBP8.5□□□□□ -1.05
NDE1-202ENST00000396355 FAM83AQ86UY5 434 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 CPNE8Q86YQ8 564 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 CBR4Q8N4T8 237 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 GALNT11Q8NCW6 608 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 AZIN2Q96A70 460 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 SLX1AQ9BQ83 275 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 EPB41L4BQ9H329 900 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 CATSPERZQ9NTU4 200 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.5□□□□□ -1.05
NDE1-202ENST00000396355 WHRNQ9P202 907 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 MTRRQ9UBK8 725 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 PLCL2Q9UPR0 1127 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 GINS2Q9Y248 185 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 PCDHGA11Q9Y5H2 935 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 SESN1Q9Y6P5 492 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 TTC28Q96AY4 2481 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 WDR81Q562E7 1941 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 TMEM150BA6NC51 233 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 HAT1O14929 419 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 NPM3O75607 178 aaKnown RBP8.5□□□□□ -1.05
NDE1-202ENST00000396355 IFNA14P01570 189 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 UGT2B4P06133 528 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 CLEC2LP0C7M8 214 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 ERCC2P18074 760 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 GARSP41250 739 aaKnown RBP8.5□□□□□ -1.05
NDE1-202ENST00000396355 NFIL3Q16649 462 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 TNFAIP8L3Q5GJ75 292 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 ARMCX4Q5H9R4 360 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 C1orf220Q5T0J3 134 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 LZTR1Q8N653 840 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 C3orf58Q8NDZ4 430 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 POF1BQ8WVV4 589 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 RASSF5Q8WWW0 418 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 RCN3Q96D15 328 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 ZNF285Q96NJ3 590 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 KCTD14Q9BQ13 255 aaPredicted RBP8.5□□□□□ -1.05
NDE1-202ENST00000396355 LXNQ9BS40 222 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 UNKQ9C0B0 810 aaKnown RBP8.5□□□□□ -1.05
NDE1-202ENST00000396355 EFCAB1Q9HAE3 211 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 SCPEP1Q9HB40 452 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 KCNK4Q9NYG8 393 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 COL20A1Q9P218 1284 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 APEX2Q9UBZ4 518 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 SFMBT1Q9UHJ3 866 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 TRAV20A0A0B4J274 112 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 FAM172BPA6NC97 362 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 K7ENM7 598 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 INPP4BO15327 924 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 SGPL1O95470 568 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 ITGB5P18084 799 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 PRIM2P49643 509 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 KPNA2P52292 529 aaKnown RBP8.49□□□□□ -1.05
NDE1-202ENST00000396355 DSG2Q14126 1118 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 FAM102BQ5T8I3 360 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 TMEM236Q5W0B7 351 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 FAM205BPQ63HN1 556 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 LSMEM1Q8N8F7 131 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 ADCY4Q8NFM4 1077 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 IL31RAQ8NI17 732 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 SLC5A11Q8WWX8 675 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 KAT5Q92993 513 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 ZHX1-C8orf76Q96EF9 292 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 GLT1D1Q96MS3 346 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 CTRCQ99895 268 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 INTS2Q9H0H0 1204 aaKnown RBP8.49□□□□□ -1.05
NDE1-202ENST00000396355 PTPRHQ9HD43 1115 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 TMEM5Q9Y2B1 443 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 SNCAIPQ9Y6H5 919 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 SH3D21A4FU49 640 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 B8ZZF3 427 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 TBC1D4O60343 1298 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 CLASP2O75122 1294 aaKnown RBP8.49□□□□□ -1.05
NDE1-202ENST00000396355 GAP43P17677 238 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 ALAS2P22557 587 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 CCNA1P78396 465 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 IL5RAQ01344 420 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 TAP1Q03518 808 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 PPP3CAQ08209 521 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 GALNT1Q10472 559 aaPredicted RBP8.49□□□□□ -1.05
NDE1-202ENST00000396355 PLD1Q13393 1074 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 HERC3Q15034 1050 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 TBRG1Q3YBR2 411 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 ALG1LQ6GMV1 187 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 ABRAXAS1Q6UWZ7 409 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 SFRP1Q8N474 314 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 CAMKK1Q8N5S9 505 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 TDRD5Q8NAT2 981 aaKnown RBP8.49□□□□□ -1.05
NDE1-202ENST00000396355 ZNF398Q8TD17 642 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 EXT2Q93063 718 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 ART4Q93070 314 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 FAM96AQ9H5X1 160 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 WDR41Q9HAD4 459 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 MAP10Q9P2G4 905 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 KCNN3Q9UGI6 736 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 XPO7Q9UIA9 1087 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms