RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 CSF2P04141 144 aa16.37■□□□□ 0.21
CXCL12-206ENST00000395795 MYF5P13349 255 aa16.37■□□□□ 0.21
CXCL12-206ENST00000395795 NME1P15531 152 aaKnown RBP16.37■□□□□ 0.21
CXCL12-206ENST00000395795 PAPOLAP51003 745 aaKnown RBP16.37■□□□□ 0.21
CXCL12-206ENST00000395795 NDST2P52849 883 aa16.37■□□□□ 0.21
CXCL12-206ENST00000395795 TPI1P60174 286 aa16.37■□□□□ 0.21
CXCL12-206ENST00000395795 RHOAP61586 193 aa16.37■□□□□ 0.21
CXCL12-206ENST00000395795 CYP4F3Q08477 520 aa16.37■□□□□ 0.21
CXCL12-206ENST00000395795 DPYSQ14117 519 aa16.37■□□□□ 0.21
CXCL12-206ENST00000395795 ERMARDQ5T6L9 678 aa16.37■□□□□ 0.21
CXCL12-206ENST00000395795 HES3Q5TGS1 186 aa16.37■□□□□ 0.21
CXCL12-206ENST00000395795 RFX8Q6ZV50 586 aa16.37■□□□□ 0.21
CXCL12-206ENST00000395795 PTAR1Q7Z6K3 402 aaPredicted RBP16.37■□□□□ 0.21
CXCL12-206ENST00000395795 LUZP1Q86V48 1076 aa16.37■□□□□ 0.21
CXCL12-206ENST00000395795 ZSCAN30Q86W11 494 aa16.37■□□□□ 0.21
CXCL12-206ENST00000395795 TP53I13Q8NBR0 393 aaPredicted RBP16.37■□□□□ 0.21
CXCL12-206ENST00000395795 DENND6BQ8NEG7 585 aa16.37■□□□□ 0.21
CXCL12-206ENST00000395795 FAM174AQ8TBP5 190 aa16.37■□□□□ 0.21
CXCL12-206ENST00000395795 DHX35Q9H5Z1 703 aaKnown RBP16.37■□□□□ 0.21
CXCL12-206ENST00000395795 CWC15Q9P013 229 aaKnown RBP16.37■□□□□ 0.21
CXCL12-206ENST00000395795 CNOT8Q9UFF9 292 aaKnown RBP16.37■□□□□ 0.21
CXCL12-206ENST00000395795 NENFQ9UMX5 172 aa16.37■□□□□ 0.21
CXCL12-206ENST00000395795 COL27A1Q8IZC6 1860 aaPredicted RBP16.37■□□□□ 0.21
CXCL12-206ENST00000395795 MYLKQ15746 1914 aa16.37■□□□□ 0.21
CXCL12-206ENST00000395795 URB1O60287 2271 aaKnown RBP16.36■□□□□ 0.21
CXCL12-206ENST00000395795 SYCE3A1L190 88 aa16.36■□□□□ 0.21
CXCL12-206ENST00000395795 EIF3CLB5ME19 914 aaKnown RBP16.36■□□□□ 0.21
CXCL12-206ENST00000395795 MUSKO15146 869 aa16.36■□□□□ 0.21
CXCL12-206ENST00000395795 MMP20O60882 483 aa16.36■□□□□ 0.21
CXCL12-206ENST00000395795 NEBLO76041 1014 aa16.36■□□□□ 0.21
CXCL12-206ENST00000395795 IGSF6O95976 241 aa16.36■□□□□ 0.21
CXCL12-206ENST00000395795 ERCC2P18074 760 aa16.36■□□□□ 0.21
CXCL12-206ENST00000395795 INSM1Q01101 510 aaPredicted RBP16.36■□□□□ 0.21
CXCL12-206ENST00000395795 KLHL30Q0D2K2 578 aa16.36■□□□□ 0.21
CXCL12-206ENST00000395795 ILKQ13418 452 aa16.36■□□□□ 0.21
CXCL12-206ENST00000395795 TMEM52BQ4KMG9 183 aa16.36■□□□□ 0.21
CXCL12-206ENST00000395795 TXNRD3NBQ6F5E7 133 aa16.36■□□□□ 0.21
CXCL12-206ENST00000395795 PPP1R2P3Q6NXS1 205 aa16.36■□□□□ 0.21
CXCL12-206ENST00000395795 NYAP1Q6ZVC0 841 aa16.36■□□□□ 0.21
CXCL12-206ENST00000395795 TTC7BQ86TV6 843 aa16.36■□□□□ 0.21
CXCL12-206ENST00000395795 DCP2Q8IU60 420 aaKnown RBP16.36■□□□□ 0.21
CXCL12-206ENST00000395795 CACTIN-AS1Q8N1I8 211 aa16.36■□□□□ 0.21
CXCL12-206ENST00000395795 PDCD7Q8N8D1 485 aaKnown RBP16.36■□□□□ 0.21
CXCL12-206ENST00000395795 FUBP1Q96AE4 644 aaKnown RBP16.36■□□□□ 0.21
CXCL12-206ENST00000395795 EIF3CQ99613 913 aaKnown RBP16.36■□□□□ 0.21
CXCL12-206ENST00000395795 TCEAL2Q9H3H9 227 aaPredicted RBP16.36■□□□□ 0.21
CXCL12-206ENST00000395795 UBA2Q9UBT2 640 aaPredicted RBP16.36■□□□□ 0.21
CXCL12-206ENST00000395795 LRRK1Q38SD2 2015 aa16.36■□□□□ 0.21
CXCL12-206ENST00000395795 ADAMTS20P59510 1910 aa16.35■□□□□ 0.21
CXCL12-206ENST00000395795 CACNA1GO43497 2377 aa16.35■□□□□ 0.21
CXCL12-206ENST00000395795 A0A1W2PQJ5 194 aa16.35■□□□□ 0.21
CXCL12-206ENST00000395795 K7ESM1 405 aa16.35■□□□□ 0.21
CXCL12-206ENST00000395795 EEF2KO00418 725 aaKnown RBP16.35■□□□□ 0.21
CXCL12-206ENST00000395795 SCAMP1O15126 338 aa16.35■□□□□ 0.21
CXCL12-206ENST00000395795 FFAR2O15552 330 aa16.35■□□□□ 0.21
CXCL12-206ENST00000395795 PEX11BO96011 259 aa16.35■□□□□ 0.21
CXCL12-206ENST00000395795 CDK4P11802 303 aa16.35■□□□□ 0.21
CXCL12-206ENST00000395795 CKMT1AP12532 417 aa16.35■□□□□ 0.21
CXCL12-206ENST00000395795 HOXB3P14651 431 aaPredicted RBP16.35■□□□□ 0.21
CXCL12-206ENST00000395795 RABIFP47224 123 aa16.35■□□□□ 0.21
CXCL12-206ENST00000395795 HCAR3P49019 387 aa16.35■□□□□ 0.21
CXCL12-206ENST00000395795 FANCCQ00597 558 aa16.35■□□□□ 0.21
CXCL12-206ENST00000395795 TARDBPQ13148 414 aaKnown RBP eCLIP16.35■□□□□ 0.21
CXCL12-206ENST00000395795 KLHL40Q2TBA0 621 aa16.35■□□□□ 0.21
CXCL12-206ENST00000395795 FILIP1LQ4L180 1135 aa16.35■□□□□ 0.21
CXCL12-206ENST00000395795 PARGQ86W56 976 aa16.35■□□□□ 0.21
CXCL12-206ENST00000395795 PSTKQ8IV42 348 aaKnown RBP16.35■□□□□ 0.21
CXCL12-206ENST00000395795 FAM181AQ8N9Y4 354 aa16.35■□□□□ 0.21
CXCL12-206ENST00000395795 TSEN2Q8NCE0 465 aaKnown RBP16.35■□□□□ 0.21
CXCL12-206ENST00000395795 ZNF548Q8NEK5 533 aaPredicted RBP16.35■□□□□ 0.21
CXCL12-206ENST00000395795 HCAR2Q8TDS4 363 aa16.35■□□□□ 0.21
CXCL12-206ENST00000395795 ZNF653Q96CK0 615 aa16.35■□□□□ 0.21
CXCL12-206ENST00000395795 APOLD1Q96LR9 279 aa16.35■□□□□ 0.21
CXCL12-206ENST00000395795 ETNK2Q9NVF9 386 aa16.35■□□□□ 0.21
CXCL12-206ENST00000395795 DNAJC28Q9NX36 388 aa16.35■□□□□ 0.21
CXCL12-206ENST00000395795 NLGN3Q9NZ94 848 aa16.35■□□□□ 0.21
CXCL12-206ENST00000395795 ASXL3Q9C0F0 2248 aa16.35■□□□□ 0.21
CXCL12-206ENST00000395795 DSPP15924 2871 aaKnown RBP16.34■□□□□ 0.21
CXCL12-206ENST00000395795 GM2AP17900 193 aa16.34■□□□□ 0.21
CXCL12-206ENST00000395795 CSNK1DP48730 415 aa16.34■□□□□ 0.21
CXCL12-206ENST00000395795 SGCGQ13326 291 aa16.34■□□□□ 0.21
CXCL12-206ENST00000395795 PDE1CQ14123 709 aaPredicted RBP16.34■□□□□ 0.21
CXCL12-206ENST00000395795 CDCP2Q5VXM1 449 aa16.34■□□□□ 0.21
CXCL12-206ENST00000395795 KCTD16Q68DU8 428 aa16.34■□□□□ 0.21
CXCL12-206ENST00000395795 ZNF354CQ86Y25 554 aa16.34■□□□□ 0.21
CXCL12-206ENST00000395795 CAMK1DQ8IU85 385 aa16.34■□□□□ 0.21
CXCL12-206ENST00000395795 RBFAQ8N0V3 343 aa16.34■□□□□ 0.21
CXCL12-206ENST00000395795 DCBLD1Q8N8Z6 715 aa16.34■□□□□ 0.21
CXCL12-206ENST00000395795 SYN2Q92777 582 aaPredicted RBP16.34■□□□□ 0.21
CXCL12-206ENST00000395795 ECHDC3Q96DC8 303 aa16.34■□□□□ 0.21
CXCL12-206ENST00000395795 SUV39H2Q9H5I1 410 aa16.34■□□□□ 0.21
CXCL12-206ENST00000395795 TRAFD1O14545 582 aaPredicted RBP16.33■□□□□ 0.2
CXCL12-206ENST00000395795 RIOK3O14730 519 aaKnown RBP16.33■□□□□ 0.2
CXCL12-206ENST00000395795 FPGTO14772 594 aa16.33■□□□□ 0.2
CXCL12-206ENST00000395795 CASC3O15234 703 aaKnown RBP16.33■□□□□ 0.2
CXCL12-206ENST00000395795 GCATO75600 419 aa16.33■□□□□ 0.2
CXCL12-206ENST00000395795 PRKCGP05129 697 aa16.33■□□□□ 0.2
CXCL12-206ENST00000395795 JUPP14923 745 aa16.33■□□□□ 0.2
CXCL12-206ENST00000395795 PCK1P35558 622 aa16.33■□□□□ 0.2
CXCL12-206ENST00000395795 MMP12P39900 470 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms