RNA–Protein interactions for RNA: ENST00000394083.6

GAPVD1-204, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 4,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-204ENST00000394083 PLVAPQ9BX97 442 aa8.54□□□□□ -1.04
GAPVD1-204ENST00000394083 PPARGC1AQ9UBK2 798 aaKnown RBP8.54□□□□□ -1.04
GAPVD1-204ENST00000394083 ATP9BO43861 1147 aa8.54□□□□□ -1.04
GAPVD1-204ENST00000394083 CSF2RAP15509 400 aa8.54□□□□□ -1.04
GAPVD1-204ENST00000394083 MAGEA11P43364 429 aa8.54□□□□□ -1.04
GAPVD1-204ENST00000394083 ZNF140P52738 457 aaPredicted RBP8.54□□□□□ -1.04
GAPVD1-204ENST00000394083 HERC6Q8IVU3 1022 aa8.54□□□□□ -1.04
GAPVD1-204ENST00000394083 APCDD1Q8J025 514 aa8.54□□□□□ -1.04
GAPVD1-204ENST00000394083 SIX6OS1Q8N1H7 587 aa8.54□□□□□ -1.04
GAPVD1-204ENST00000394083 TTC39CQ8N584 583 aa8.54□□□□□ -1.04
GAPVD1-204ENST00000394083 SPATA17Q96L03 361 aa8.54□□□□□ -1.04
GAPVD1-204ENST00000394083 RPL10LQ96L21 214 aaKnown RBP8.54□□□□□ -1.04
GAPVD1-204ENST00000394083 ZSWIM3Q96MP5 696 aa8.54□□□□□ -1.04
GAPVD1-204ENST00000394083 LHX3Q9UBR4 397 aa8.54□□□□□ -1.04
GAPVD1-204ENST00000394083 GSC2O15499 205 aa8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 SGTAO43765 313 aa8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 TBX10O75333 385 aa8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 HMBSP08397 361 aa8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 MYOGP15173 224 aa8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 EPORP19235 508 aa8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 SLC8A1P32418 973 aa8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 EFEMP1Q12805 493 aa8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 CTSL3PQ5NE16 218 aa8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 PSAPL1Q6NUJ1 521 aa8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 LINGO4Q6UY18 593 aa8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 BBOF1Q8ND07 529 aa8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 ZNF669Q96BR6 464 aaPredicted RBP8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 TRIM8Q9BZR9 551 aa8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 GSTO2Q9H4Y5 243 aa8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 ELAC1Q9H777 363 aaKnown RBP8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 LRRC4Q9HBW1 653 aa8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 MAD1L1Q9Y6D9 718 aa8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 ARHGAP42A6NI28 874 aa8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 SLC38A8A6NNN8 435 aa8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 STX16-NPEPL1H3BU86 382 aa8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 TGDSO95455 350 aa8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 GNAT1P11488 350 aa8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 GRIK1P39086 918 aa8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 AIF1P55008 147 aa8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 GALNT3Q14435 633 aa8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 CILP2Q8IUL8 1156 aa8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 WDR75Q8IWA0 830 aaKnown RBP8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 SUGP1Q8IWZ8 645 aaKnown RBP8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 POU5F2Q8N7G0 328 aa8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 IGSF21Q96ID5 467 aa8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 PPP1R12CQ9BZL4 782 aa8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 SHCBP1LQ9BZQ2 653 aa8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 RASSF4Q9H2L5 321 aa8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 STARD7Q9NQZ5 370 aa8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 ABCC13Q9NSE7 274 aa8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 OXSMQ9NWU1 459 aa8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 DFFAO00273 331 aa8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 FBXO21O94952 628 aa8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 STX2P32856 288 aa8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 CD86P42081 329 aa8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 GLRBP48167 497 aa8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 WNT3AP56704 352 aa8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 DEFB128Q7Z7B8 93 aa8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 STRA8Q7Z7C7 330 aa8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 CDKL3Q8IVW4 592 aaPredicted RBP8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 FATE1Q969F0 183 aa8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 MARK4Q96L34 752 aa8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 MGME1Q9BQP7 344 aa8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 IARS2Q9NSE4 1012 aaKnown RBP8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 SLC7A8Q9UHI5 535 aa8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 SMG5Q9UPR3 1016 aaKnown RBP8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 TCAF1Q9Y4C2 921 aa8.53□□□□□ -1.04
GAPVD1-204ENST00000394083 VAPBO95292 243 aa8.52□□□□□ -1.04
GAPVD1-204ENST00000394083 B4GALNT1Q00973 533 aa8.52□□□□□ -1.04
GAPVD1-204ENST00000394083 MS4A2Q01362 244 aa8.52□□□□□ -1.04
GAPVD1-204ENST00000394083 TLE2Q04725 743 aa8.52□□□□□ -1.04
GAPVD1-204ENST00000394083 SLC44A4Q53GD3 710 aa8.52□□□□□ -1.04
GAPVD1-204ENST00000394083 EPGNQ6UW88 154 aa8.52□□□□□ -1.04
GAPVD1-204ENST00000394083 ARID3BQ8IVW6 561 aaPredicted RBP8.52□□□□□ -1.04
GAPVD1-204ENST00000394083 HEXDCQ8WVB3 486 aa8.52□□□□□ -1.04
GAPVD1-204ENST00000394083 TCEAL4Q96EI5 215 aa8.52□□□□□ -1.04
GAPVD1-204ENST00000394083 PAIP2Q9BPZ3 127 aaKnown RBP8.52□□□□□ -1.04
GAPVD1-204ENST00000394083 ZFP37Q9Y6Q3 630 aaPredicted RBP8.52□□□□□ -1.04
GAPVD1-204ENST00000394083 MSH2P43246 934 aa8.52□□□□□ -1.05
GAPVD1-204ENST00000394083 ERVFC1P60507 584 aa8.52□□□□□ -1.05
GAPVD1-204ENST00000394083 CDK16Q00536 496 aa8.52□□□□□ -1.05
GAPVD1-204ENST00000394083 TRAF2Q12933 501 aa8.52□□□□□ -1.05
GAPVD1-204ENST00000394083 TECRLQ5HYJ1 363 aa8.52□□□□□ -1.05
GAPVD1-204ENST00000394083 IL31Q6EBC2 164 aa8.52□□□□□ -1.05
GAPVD1-204ENST00000394083 VN1R2Q8NFZ6 395 aa8.52□□□□□ -1.05
GAPVD1-204ENST00000394083 ZNF333Q96JL9 665 aa8.52□□□□□ -1.05
GAPVD1-204ENST00000394083 FBRSL1Q9HCM7 1045 aaKnown RBP8.52□□□□□ -1.05
GAPVD1-204ENST00000394083 PPM1HQ9ULR3 514 aa8.52□□□□□ -1.05
GAPVD1-204ENST00000394083 IQCF5A8MTL0 148 aa8.52□□□□□ -1.05
GAPVD1-204ENST00000394083 FCHO1O14526 889 aa8.52□□□□□ -1.05
GAPVD1-204ENST00000394083 GSTA1P08263 222 aa8.52□□□□□ -1.05
GAPVD1-204ENST00000394083 SNRPAP09012 282 aaKnown RBP8.52□□□□□ -1.05
GAPVD1-204ENST00000394083 SUOXP51687 545 aa8.52□□□□□ -1.05
GAPVD1-204ENST00000394083 ITGA9Q13797 1035 aa8.52□□□□□ -1.05
GAPVD1-204ENST00000394083 CCNIQ14094 377 aa8.52□□□□□ -1.05
GAPVD1-204ENST00000394083 PYCR3Q53H96 274 aa8.52□□□□□ -1.05
GAPVD1-204ENST00000394083 PKN3Q6P5Z2 889 aa8.52□□□□□ -1.05
GAPVD1-204ENST00000394083 C4orf50Q6ZRC1 276 aa8.52□□□□□ -1.05
GAPVD1-204ENST00000394083 MON1AQ86VX9 555 aa8.52□□□□□ -1.05
GAPVD1-204ENST00000394083 KCNMB4Q86W47 210 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms