RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 LPIN3Q9BQK8 851 aa13.99□□□□□ -0.17
SDC1-202ENST00000381150 DGCR6LQ9BY27 220 aa13.99□□□□□ -0.17
SDC1-202ENST00000381150 CCDC90BQ9GZT6 254 aa13.99□□□□□ -0.17
SDC1-202ENST00000381150 SPATA7Q9P0W8 599 aa13.99□□□□□ -0.17
SDC1-202ENST00000381150 CNOT6Q9ULM6 557 aaKnown RBP13.99□□□□□ -0.17
SDC1-202ENST00000381150 GINS2Q9Y248 185 aa13.99□□□□□ -0.17
SDC1-202ENST00000381150 CORINQ9Y5Q5 1042 aa13.99□□□□□ -0.17
SDC1-202ENST00000381150 SNX9Q9Y5X1 595 aa13.99□□□□□ -0.17
SDC1-202ENST00000381150 PRORSD1PA6NEY8 169 aa13.99□□□□□ -0.17
SDC1-202ENST00000381150 RPL26P61254 145 aaKnown RBP13.99□□□□□ -0.17
SDC1-202ENST00000381150 LSM3P62310 102 aaKnown RBP13.99□□□□□ -0.17
SDC1-202ENST00000381150 CCNA1P78396 465 aa13.99□□□□□ -0.17
SDC1-202ENST00000381150 PPP1R3AQ16821 1122 aa13.99□□□□□ -0.17
SDC1-202ENST00000381150 PGS1Q32NB8 556 aa13.99□□□□□ -0.17
SDC1-202ENST00000381150 CCDC153Q494R4 210 aa13.99□□□□□ -0.17
SDC1-202ENST00000381150 DUSP28Q4G0W2 176 aa13.99□□□□□ -0.17
SDC1-202ENST00000381150 BOLA3Q53S33 107 aa13.99□□□□□ -0.17
SDC1-202ENST00000381150 PMF1Q6P1K2 205 aa13.99□□□□□ -0.17
SDC1-202ENST00000381150 KCTD8Q6ZWB6 473 aa13.99□□□□□ -0.17
SDC1-202ENST00000381150 TMEM110Q86TL2 294 aa13.99□□□□□ -0.17
SDC1-202ENST00000381150 DHFR2Q86XF0 187 aa13.99□□□□□ -0.17
SDC1-202ENST00000381150 IRGQQ8WZA9 623 aa13.99□□□□□ -0.17
SDC1-202ENST00000381150 PPP1R14BQ96C90 147 aa13.99□□□□□ -0.17
SDC1-202ENST00000381150 ING2Q9H160 280 aa13.99□□□□□ -0.17
SDC1-202ENST00000381150 SMOXQ9NWM0 555 aa13.99□□□□□ -0.17
SDC1-202ENST00000381150 GJD2Q9UKL4 321 aa13.99□□□□□ -0.17
SDC1-202ENST00000381150 SLC45A1Q9Y2W3 748 aa13.99□□□□□ -0.17
SDC1-202ENST00000381150 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.98□□□□□ -0.17
SDC1-202ENST00000381150 H3BMQ9 156 aa13.98□□□□□ -0.17
SDC1-202ENST00000381150 NDUFB5O43674 189 aa13.98□□□□□ -0.17
SDC1-202ENST00000381150 OXSR1O95747 527 aaPredicted RBP13.98□□□□□ -0.17
SDC1-202ENST00000381150 PRKCGP05129 697 aa13.98□□□□□ -0.17
SDC1-202ENST00000381150 MMP3P08254 477 aa13.98□□□□□ -0.17
SDC1-202ENST00000381150 CDK18Q07002 472 aa13.98□□□□□ -0.17
SDC1-202ENST00000381150 FASTKQ14296 549 aaKnown RBP13.98□□□□□ -0.17
SDC1-202ENST00000381150 CCDC14Q49A88 953 aa13.98□□□□□ -0.17
SDC1-202ENST00000381150 PPP1R26Q5T8A7 1209 aaPredicted RBP13.98□□□□□ -0.17
SDC1-202ENST00000381150 TTC30AQ86WT1 665 aa13.98□□□□□ -0.17
SDC1-202ENST00000381150 TP53INP2Q8IXH6 220 aa13.98□□□□□ -0.17
SDC1-202ENST00000381150 SLC15A3Q8IY34 581 aa13.98□□□□□ -0.17
SDC1-202ENST00000381150 ACMSDQ8TDX5 336 aa13.98□□□□□ -0.17
SDC1-202ENST00000381150 APBB2Q92870 758 aa13.98□□□□□ -0.17
SDC1-202ENST00000381150 TAMM41Q96BW9 452 aa13.98□□□□□ -0.17
SDC1-202ENST00000381150 PHF21BQ96EK2 531 aa13.98□□□□□ -0.17
SDC1-202ENST00000381150 COG8Q96MW5 612 aa13.98□□□□□ -0.17
SDC1-202ENST00000381150 MRPL45Q9BRJ2 306 aaKnown RBP13.98□□□□□ -0.17
SDC1-202ENST00000381150 NT5C1AQ9BXI3 368 aa13.98□□□□□ -0.17
SDC1-202ENST00000381150 CDHR5Q9HBB8 845 aa13.98□□□□□ -0.17
SDC1-202ENST00000381150 SPON1Q9HCB6 807 aa13.98□□□□□ -0.17
SDC1-202ENST00000381150 TBCCD1Q9NVR7 557 aa13.98□□□□□ -0.17
SDC1-202ENST00000381150 LAMA3Q16787 3333 aa13.98□□□□□ -0.17
SDC1-202ENST00000381150 BCL10O95999 233 aa13.98□□□□□ -0.17
SDC1-202ENST00000381150 PGAM1P18669 254 aa13.98□□□□□ -0.17
SDC1-202ENST00000381150 GLDCP23378 1020 aa13.98□□□□□ -0.17
SDC1-202ENST00000381150 PRKCQQ04759 706 aa13.98□□□□□ -0.17
SDC1-202ENST00000381150 RAB39AQ14964 217 aa13.98□□□□□ -0.17
SDC1-202ENST00000381150 FUT11Q495W5 492 aa13.98□□□□□ -0.17
SDC1-202ENST00000381150 ZBED5Q49AG3 693 aa13.98□□□□□ -0.17
SDC1-202ENST00000381150 CERCAMQ5T4B2 595 aa13.98□□□□□ -0.17
SDC1-202ENST00000381150 BORAQ6PGQ7 559 aa13.98□□□□□ -0.17
SDC1-202ENST00000381150 ALKAL1Q6UXT8 129 aa13.98□□□□□ -0.17
SDC1-202ENST00000381150 PNPLA1Q8N8W4 532 aa13.98□□□□□ -0.17
SDC1-202ENST00000381150 KIF12Q96FN5 646 aa13.98□□□□□ -0.17
SDC1-202ENST00000381150 FCRL3Q96P31 734 aaPredicted RBP13.98□□□□□ -0.17
SDC1-202ENST00000381150 SEPHS2Q99611 448 aa13.98□□□□□ -0.17
SDC1-202ENST00000381150 HIPK3Q9H422 1215 aa13.98□□□□□ -0.17
SDC1-202ENST00000381150 MKS1Q9NXB0 559 aa13.98□□□□□ -0.17
SDC1-202ENST00000381150 TLL2Q9Y6L7 1015 aa13.98□□□□□ -0.17
SDC1-202ENST00000381150 GPR32O75388 356 aa13.98□□□□□ -0.17
SDC1-202ENST00000381150 GMNNO75496 209 aa13.98□□□□□ -0.17
SDC1-202ENST00000381150 CAPRIN1Q14444 709 aaKnown RBP13.98□□□□□ -0.17
SDC1-202ENST00000381150 ZNF829Q3KNS6 432 aaPredicted RBP13.98□□□□□ -0.17
SDC1-202ENST00000381150 ZNF618Q5T7W0 954 aa13.98□□□□□ -0.17
SDC1-202ENST00000381150 CLEC4CQ8WTT0 213 aa13.98□□□□□ -0.17
SDC1-202ENST00000381150 SLC35F5Q8WV83 523 aa13.98□□□□□ -0.17
SDC1-202ENST00000381150 BRI3BPQ8WY22 251 aa13.98□□□□□ -0.17
SDC1-202ENST00000381150 NDRG1Q92597 394 aaKnown RBP13.98□□□□□ -0.17
SDC1-202ENST00000381150 SLC35B4Q969S0 331 aa13.98□□□□□ -0.17
SDC1-202ENST00000381150 HERC2P3Q9BVR0 1158 aa13.98□□□□□ -0.17
SDC1-202ENST00000381150 CHST12Q9NRB3 414 aa13.98□□□□□ -0.17
SDC1-202ENST00000381150 RAP2CQ9Y3L5 183 aa13.98□□□□□ -0.17
SDC1-202ENST00000381150 KANSL1LA0AUZ9 987 aa13.97□□□□□ -0.17
SDC1-202ENST00000381150 MRASO14807 208 aa13.97□□□□□ -0.17
SDC1-202ENST00000381150 ARL4AP40617 200 aa13.97□□□□□ -0.17
SDC1-202ENST00000381150 CBLBQ13191 982 aa13.97□□□□□ -0.17
SDC1-202ENST00000381150 DNASE1L3Q13609 305 aa13.97□□□□□ -0.17
SDC1-202ENST00000381150 GRB14Q14449 540 aa13.97□□□□□ -0.17
SDC1-202ENST00000381150 PDK2Q15119 407 aa13.97□□□□□ -0.17
SDC1-202ENST00000381150 HABP4Q5JVS0 413 aaKnown RBP13.97□□□□□ -0.17
SDC1-202ENST00000381150 ACOT1Q86TX2 421 aa13.97□□□□□ -0.17
SDC1-202ENST00000381150 SYT17Q9BSW7 474 aa13.97□□□□□ -0.17
SDC1-202ENST00000381150 ADI1Q9BV57 179 aa13.97□□□□□ -0.17
SDC1-202ENST00000381150 EPS8L2Q9H6S3 715 aa13.97□□□□□ -0.17
SDC1-202ENST00000381150 RPF2Q9H7B2 306 aaKnown RBP13.97□□□□□ -0.17
SDC1-202ENST00000381150 CHRAC1Q9NRG0 131 aa13.97□□□□□ -0.17
SDC1-202ENST00000381150 XPR1Q9UBH6 696 aa13.97□□□□□ -0.17
SDC1-202ENST00000381150 SQORQ9Y6N5 450 aa13.97□□□□□ -0.17
SDC1-202ENST00000381150 PDCD11Q14690 1871 aaKnown RBP13.97□□□□□ -0.17
SDC1-202ENST00000381150 G3V2L1 256 aa13.97□□□□□ -0.17
SDC1-202ENST00000381150 MAGP20916 626 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms