RNA–Protein interactions for RNA: ENST00000380003.7

C9orf72-203, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-203ENST00000380003 FADS3Q9Y5Q0 445 aa4.73□□□□□ -1.65
C9orf72-203ENST00000380003 CSMD2Q7Z408 3487 aa4.73□□□□□ -1.65
C9orf72-203ENST00000380003 TP53BP1Q12888 1972 aaPredicted RBP4.73□□□□□ -1.65
C9orf72-203ENST00000380003 CRYBG3Q68DQ2 2970 aa4.73□□□□□ -1.65
C9orf72-203ENST00000380003 TCRBV5S1A1TA0A578 114 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 SIGLEC16A6NMB1 481 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 TMEM110-MUSTN1A8MSY1 372 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 PRAMEF26H0Y7S4 382 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 TLX3O43711 291 aaPredicted RBP4.72□□□□□ -1.65
C9orf72-203ENST00000380003 SLC4A1P02730 911 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 PRNPP04156 253 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 CAPNS1P04632 268 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 JUNDP17535 347 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 HNRNPA2B1P22626 353 aaKnown RBP4.72□□□□□ -1.65
C9orf72-203ENST00000380003 EIF4A3P38919 411 aaKnown RBP4.72□□□□□ -1.65
C9orf72-203ENST00000380003 NEK3P51956 506 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 ZNF143P52747 638 aaPredicted RBP4.72□□□□□ -1.65
C9orf72-203ENST00000380003 TPI1P60174 286 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 KLHL30Q0D2K2 578 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 SRSF6Q13247 344 aaKnown RBP4.72□□□□□ -1.65
C9orf72-203ENST00000380003 SLC12A1Q13621 1099 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 CYTH1Q15438 398 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 ZNF423Q2M1K9 1284 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 MYLK3Q32MK0 819 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 SETMARQ53H47 684 aaPredicted RBP4.72□□□□□ -1.65
C9orf72-203ENST00000380003 EFHC2Q5JST6 749 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 MANEALQ5VSG8 457 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 TTC39BQ5VTQ0 682 aaPredicted RBP4.72□□□□□ -1.65
C9orf72-203ENST00000380003 SFMBT2Q5VUG0 894 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 NAPEPLDQ6IQ20 393 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 ZNF761Q86XN6 746 aaPredicted RBP4.72□□□□□ -1.65
C9orf72-203ENST00000380003 HID1Q8IV36 788 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 MFSD2AQ8NA29 543 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 TBC1D31Q96DN5 1066 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 ARHGEF26Q96DR7 871 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 KCTD15Q96SI1 283 aaPredicted RBP4.72□□□□□ -1.65
C9orf72-203ENST00000380003 GOLPH3Q9H4A6 298 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 CBX8Q9HC52 389 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 ARFGAP3Q9NP61 516 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 RTN4Q9NQC3 1192 aaKnown RBP4.72□□□□□ -1.65
C9orf72-203ENST00000380003 CWC15Q9P013 229 aaKnown RBP4.72□□□□□ -1.65
C9orf72-203ENST00000380003 FZD10Q9ULW2 581 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 PRKAB1Q9Y478 270 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 NEUROG3Q9Y4Z2 214 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 MYLKQ15746 1914 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 A0A087X0T9 212 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 A0A1W2PNU3 283 aaPredicted RBP4.72□□□□□ -1.65
C9orf72-203ENST00000380003 TMEM202A6NGA9 273 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 LRRC10BA6NIK2 292 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 PCDHGA12O60330 932 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 LRCH4O75427 683 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 FAM228BP0C875 321 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 TSHRP16473 764 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 CTPS1P17812 591 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 ERCC2P18074 760 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 ACADVLP49748 655 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 ADKP55263 362 aaKnown RBP4.72□□□□□ -1.65
C9orf72-203ENST00000380003 SNX16P57768 344 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 INSM1Q01101 510 aaPredicted RBP4.72□□□□□ -1.65
C9orf72-203ENST00000380003 ASIC2Q16515 512 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 C5orf22Q49AR2 442 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 TMEM259Q4ZIN3 620 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 C3orf38Q5JPI3 329 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 ACAD10Q6JQN1 1059 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 CYP4V2Q6ZWL3 525 aaPredicted RBP4.72□□□□□ -1.65
C9orf72-203ENST00000380003 TMPRSS7Q7RTY8 843 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 TRIM74Q86UV6 250 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 Q8N9G6 341 aaPredicted RBP4.72□□□□□ -1.65
C9orf72-203ENST00000380003 KDF1Q8NAX2 398 aaPredicted RBP4.72□□□□□ -1.65
C9orf72-203ENST00000380003 ANKRD20A12PQ8NF67 263 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 PATE1Q8WXA2 126 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 CENPIQ92674 756 aaPredicted RBP4.72□□□□□ -1.65
C9orf72-203ENST00000380003 PDXPQ96GD0 296 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 FEM1CQ96JP0 617 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 FAM81BQ96LP2 452 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 LENG8Q96PV6 779 aaPredicted RBP4.72□□□□□ -1.65
C9orf72-203ENST00000380003 NCAPGQ9BPX3 1015 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 CPNE5Q9HCH3 593 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.72□□□□□ -1.65
C9orf72-203ENST00000380003 IFNKQ9P0W0 207 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 SCML1Q9UN30 329 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 EEF2KO00418 725 aaKnown RBP4.72□□□□□ -1.65
C9orf72-203ENST00000380003 BRINP1O60477 761 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 USP12O75317 370 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 PIAS2O75928 621 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 PDHA1P08559 390 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 ALPIP09923 528 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 TIMP2P16035 220 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 RHOQP17081 205 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 L1CAMP32004 1257 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 IGFALSP35858 605 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 POLD2P49005 469 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 THOP1P52888 689 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 IHHQ14623 411 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 IQCB1Q15051 598 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 TGIF1Q15583 401 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 SMAD1Q15797 465 aaKnown RBP4.72□□□□□ -1.65
C9orf72-203ENST00000380003 MEA1Q16626 185 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 ZNF805Q5CZA5 627 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 PERM1Q5SV97 790 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms