RNA–Protein interactions for RNA: ENST00000378904.4

LYSMD4-203, Transcript of LysM domain containing 4, humanhuman

BASIC

Gene LYSMD4, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-203ENST00000378904 MT-CO1P00395 513 aa17.72■□□□□ 0.43
LYSMD4-203ENST00000378904 PENKP01210 267 aaPredicted RBP17.72■□□□□ 0.43
LYSMD4-203ENST00000378904 KRT4P19013 534 aa17.72■□□□□ 0.43
LYSMD4-203ENST00000378904 CES1P23141 567 aa17.72■□□□□ 0.43
LYSMD4-203ENST00000378904 MSLNQ13421 630 aaPredicted RBP17.72■□□□□ 0.43
LYSMD4-203ENST00000378904 SEPT6Q14141 434 aa17.72■□□□□ 0.43
LYSMD4-203ENST00000378904 MPP2Q14168 576 aa17.72■□□□□ 0.43
LYSMD4-203ENST00000378904 PLEKHG6Q3KR16 790 aa17.72■□□□□ 0.43
LYSMD4-203ENST00000378904 LGSNQ5TDP6 509 aa17.72■□□□□ 0.43
LYSMD4-203ENST00000378904 RETSATQ6NUM9 610 aa17.72■□□□□ 0.43
LYSMD4-203ENST00000378904 PPP2R3CQ969Q6 453 aa17.72■□□□□ 0.43
LYSMD4-203ENST00000378904 APOL5Q9BWW9 433 aa17.72■□□□□ 0.43
LYSMD4-203ENST00000378904 BBS2Q9BXC9 721 aa17.72■□□□□ 0.43
LYSMD4-203ENST00000378904 INTS9Q9NV88 658 aaKnown RBP17.72■□□□□ 0.43
LYSMD4-203ENST00000378904 LHX3Q9UBR4 397 aa17.72■□□□□ 0.43
LYSMD4-203ENST00000378904 PRKAG3Q9UGI9 489 aa17.72■□□□□ 0.43
LYSMD4-203ENST00000378904 INTS6Q9UL03 887 aaKnown RBP17.72■□□□□ 0.43
LYSMD4-203ENST00000378904 WNT6Q9Y6F9 365 aa17.72■□□□□ 0.43
LYSMD4-203ENST00000378904 TRIM49D1C9J1S8 452 aa17.71■□□□□ 0.43
LYSMD4-203ENST00000378904 EPOP01588 193 aa17.71■□□□□ 0.43
LYSMD4-203ENST00000378904 MT-ND3P03897 115 aa17.71■□□□□ 0.43
LYSMD4-203ENST00000378904 SNRPAP09012 282 aaKnown RBP17.71■□□□□ 0.43
LYSMD4-203ENST00000378904 HLA-DPA1P20036 260 aa17.71■□□□□ 0.43
LYSMD4-203ENST00000378904 SERPINB9P50453 376 aa17.71■□□□□ 0.43
LYSMD4-203ENST00000378904 ACTN3Q08043 901 aaPredicted RBP17.71■□□□□ 0.43
LYSMD4-203ENST00000378904 KCNMB4Q86W47 210 aa17.71■□□□□ 0.43
LYSMD4-203ENST00000378904 CELF5Q8N6W0 485 aaKnown RBP17.71■□□□□ 0.43
LYSMD4-203ENST00000378904 ANKRD42Q8N9B4 389 aa17.71■□□□□ 0.43
LYSMD4-203ENST00000378904 TIFAQ96CG3 184 aa17.71■□□□□ 0.43
LYSMD4-203ENST00000378904 OTUB2Q96DC9 234 aa17.71■□□□□ 0.43
LYSMD4-203ENST00000378904 LMLNQ96KR4 655 aa17.71■□□□□ 0.43
LYSMD4-203ENST00000378904 C20orf96Q9NUD7 363 aaPredicted RBP17.71■□□□□ 0.43
LYSMD4-203ENST00000378904 ABCB8Q9NUT2 735 aa17.71■□□□□ 0.43
LYSMD4-203ENST00000378904 PSAT1Q9Y617 370 aa17.71■□□□□ 0.43
LYSMD4-203ENST00000378904 KRT38O76015 456 aa17.71■□□□□ 0.42
LYSMD4-203ENST00000378904 HLA-FP30511 346 aa17.71■□□□□ 0.42
LYSMD4-203ENST00000378904 PLK1P53350 603 aa17.71■□□□□ 0.42
LYSMD4-203ENST00000378904 RHOAP61586 193 aa17.71■□□□□ 0.42
LYSMD4-203ENST00000378904 SLC12A1Q13621 1099 aa17.71■□□□□ 0.42
LYSMD4-203ENST00000378904 BMPR2Q13873 1038 aa17.71■□□□□ 0.42
LYSMD4-203ENST00000378904 GALNT3Q14435 633 aa17.71■□□□□ 0.42
LYSMD4-203ENST00000378904 HSP90AA5PQ58FG0 334 aa17.71■□□□□ 0.42
LYSMD4-203ENST00000378904 ESRP1Q6NXG1 681 aaKnown RBP17.71■□□□□ 0.42
LYSMD4-203ENST00000378904 PACS1Q6VY07 963 aa17.71■□□□□ 0.42
LYSMD4-203ENST00000378904 TDHQ8IZJ6 230 aa17.71■□□□□ 0.42
LYSMD4-203ENST00000378904 ADGRG2Q8IZP9 1017 aa17.71■□□□□ 0.42
LYSMD4-203ENST00000378904 CENPTQ96BT3 561 aa17.71■□□□□ 0.42
LYSMD4-203ENST00000378904 SERAC1Q96JX3 654 aa17.71■□□□□ 0.42
LYSMD4-203ENST00000378904 LRRC3BQ96PB8 259 aa17.71■□□□□ 0.42
LYSMD4-203ENST00000378904 TRIB3Q96RU7 358 aa17.71■□□□□ 0.42
LYSMD4-203ENST00000378904 RANBP9Q96S59 729 aa17.71■□□□□ 0.42
LYSMD4-203ENST00000378904 KLF6Q99612 283 aaPredicted RBP17.71■□□□□ 0.42
LYSMD4-203ENST00000378904 HEATR9A2RTY3 570 aa17.7■□□□□ 0.42
LYSMD4-203ENST00000378904 K7ERQ8 282 aa17.7■□□□□ 0.42
LYSMD4-203ENST00000378904 PRPF4O43172 522 aaKnown RBP eCLIP17.7■□□□□ 0.42
LYSMD4-203ENST00000378904 GLP2RO95838 553 aa17.7■□□□□ 0.42
LYSMD4-203ENST00000378904 FGF1P05230 155 aa17.7■□□□□ 0.42
LYSMD4-203ENST00000378904 WEE1P30291 646 aa17.7■□□□□ 0.42
LYSMD4-203ENST00000378904 GBP2P32456 591 aaPredicted RBP17.7■□□□□ 0.42
LYSMD4-203ENST00000378904 SEC24CP53992 1094 aa17.7■□□□□ 0.42
LYSMD4-203ENST00000378904 NSUN2Q08J23 767 aaKnown RBP eCLIP17.7■□□□□ 0.42
LYSMD4-203ENST00000378904 PITRM1Q5JRX3 1037 aa17.7■□□□□ 0.42
LYSMD4-203ENST00000378904 LY6G5CQ5SRR4 150 aa17.7■□□□□ 0.42
LYSMD4-203ENST00000378904 TEDDM1Q5T9Z0 273 aa17.7■□□□□ 0.42
LYSMD4-203ENST00000378904 ARMC3Q5W041 872 aa17.7■□□□□ 0.42
LYSMD4-203ENST00000378904 NPAS3Q8IXF0 933 aa17.7■□□□□ 0.42
LYSMD4-203ENST00000378904 MGARPQ8TDB4 240 aa17.7■□□□□ 0.42
LYSMD4-203ENST00000378904 ATXN2LQ8WWM7 1075 aaKnown RBP17.7■□□□□ 0.42
LYSMD4-203ENST00000378904 TREX1Q9NSU2 369 aa17.7■□□□□ 0.42
LYSMD4-203ENST00000378904 SLC2A6Q9UGQ3 507 aa17.7■□□□□ 0.42
LYSMD4-203ENST00000378904 SMG5Q9UPR3 1016 aaKnown RBP17.7■□□□□ 0.42
LYSMD4-203ENST00000378904 HMX2A2RU54 273 aa17.69■□□□□ 0.42
LYSMD4-203ENST00000378904 FAM47DPA6NHR8 397 aa17.69■□□□□ 0.42
LYSMD4-203ENST00000378904 GOLGA8RI6L899 631 aa17.69■□□□□ 0.42
LYSMD4-203ENST00000378904 SLC9A3R1O14745 358 aaPredicted RBP17.69■□□□□ 0.42
LYSMD4-203ENST00000378904 RASSF9O75901 435 aa17.69■□□□□ 0.42
LYSMD4-203ENST00000378904 TYRP14679 529 aa17.69■□□□□ 0.42
LYSMD4-203ENST00000378904 FSHRP23945 695 aa17.69■□□□□ 0.42
LYSMD4-203ENST00000378904 MROH9Q5TGP6 573 aa17.69■□□□□ 0.42
LYSMD4-203ENST00000378904 PDPK2PQ6A1A2 396 aa17.69■□□□□ 0.42
LYSMD4-203ENST00000378904 ASTLQ6HA08 431 aaPredicted RBP17.69■□□□□ 0.42
LYSMD4-203ENST00000378904 RSPRY1Q96DX4 576 aa17.69■□□□□ 0.42
LYSMD4-203ENST00000378904 MTBPQ96DY7 904 aa17.69■□□□□ 0.42
LYSMD4-203ENST00000378904 AGAP2Q99490 1192 aa17.69■□□□□ 0.42
LYSMD4-203ENST00000378904 CPNE1Q99829 537 aa17.69■□□□□ 0.42
LYSMD4-203ENST00000378904 TDRD1Q9BXT4 1180 aaKnown RBP17.69■□□□□ 0.42
LYSMD4-203ENST00000378904 SSU72Q9NP77 194 aaKnown RBP17.69■□□□□ 0.42
LYSMD4-203ENST00000378904 CDH22Q9UJ99 828 aa17.69■□□□□ 0.42
LYSMD4-203ENST00000378904 CHKBQ9Y259 395 aa17.69■□□□□ 0.42
LYSMD4-203ENST00000378904 GOLGA8TH3BQL2 631 aa17.69■□□□□ 0.42
LYSMD4-203ENST00000378904 LINC01565O15544 149 aa17.69■□□□□ 0.42
LYSMD4-203ENST00000378904 SMAD6O43541 496 aaKnown RBP17.69■□□□□ 0.42
LYSMD4-203ENST00000378904 TYROBPO43914 113 aa17.69■□□□□ 0.42
LYSMD4-203ENST00000378904 NDST3O95803 873 aa17.69■□□□□ 0.42
LYSMD4-203ENST00000378904 CNTFP26441 200 aa17.69■□□□□ 0.42
LYSMD4-203ENST00000378904 BMP8BP34820 402 aa17.69■□□□□ 0.42
LYSMD4-203ENST00000378904 VIPR2P41587 438 aa17.69■□□□□ 0.42
LYSMD4-203ENST00000378904 HYAL1Q12794 435 aa17.69■□□□□ 0.42
LYSMD4-203ENST00000378904 LRRC14Q15048 493 aa17.69■□□□□ 0.42
LYSMD4-203ENST00000378904 CNGA3Q16281 694 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms