RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 STOML2Q9UJZ1 356 aa19.63■□□□□ 0.73
SSU72-204ENST00000378726 CPQQ9Y646 472 aa19.63■□□□□ 0.73
SSU72-204ENST00000378726 A0A1B0GVM2 712 aa19.63■□□□□ 0.73
SSU72-204ENST00000378726 ILVBLA1L0T0 632 aa19.63■□□□□ 0.73
SSU72-204ENST00000378726 TCAF2A6NFQ2 919 aa19.63■□□□□ 0.73
SSU72-204ENST00000378726 HIDE1A8MVS5 230 aa19.63■□□□□ 0.73
SSU72-204ENST00000378726 OLFM2O95897 454 aa19.63■□□□□ 0.73
SSU72-204ENST00000378726 RHOCP08134 193 aa19.63■□□□□ 0.73
SSU72-204ENST00000378726 HOXD9P28356 352 aaPredicted RBP19.63■□□□□ 0.73
SSU72-204ENST00000378726 CTNNB1P35222 781 aa19.63■□□□□ 0.73
SSU72-204ENST00000378726 CCNHP51946 323 aaPredicted RBP19.63■□□□□ 0.73
SSU72-204ENST00000378726 CHST9Q7L1S5 443 aa19.63■□□□□ 0.73
SSU72-204ENST00000378726 KCNMB4Q86W47 210 aa19.63■□□□□ 0.73
SSU72-204ENST00000378726 CCDC117Q8IWD4 279 aaPredicted RBP19.63■□□□□ 0.73
SSU72-204ENST00000378726 MRPL43Q8N983 215 aaKnown RBP19.63■□□□□ 0.73
SSU72-204ENST00000378726 TTC16Q8NEE8 873 aa19.63■□□□□ 0.73
SSU72-204ENST00000378726 PHOSPHO2Q8TCD6 241 aa19.63■□□□□ 0.73
SSU72-204ENST00000378726 ADAMTS19Q8TE59 1207 aa19.63■□□□□ 0.73
SSU72-204ENST00000378726 ZNF599Q96NL3 588 aa19.63■□□□□ 0.73
SSU72-204ENST00000378726 CPNE1Q99829 537 aa19.63■□□□□ 0.73
SSU72-204ENST00000378726 TSSK1BQ9BXA7 367 aa19.63■□□□□ 0.73
SSU72-204ENST00000378726 LRRC3Q9BY71 257 aa19.63■□□□□ 0.73
SSU72-204ENST00000378726 ARNT2Q9HBZ2 717 aa19.63■□□□□ 0.73
SSU72-204ENST00000378726 IRAK3Q9Y616 596 aa19.63■□□□□ 0.73
SSU72-204ENST00000378726 KDELR3O43731 214 aa19.62■□□□□ 0.73
SSU72-204ENST00000378726 HAUS5O94927 633 aa19.62■□□□□ 0.73
SSU72-204ENST00000378726 GP5P40197 560 aa19.62■□□□□ 0.73
SSU72-204ENST00000378726 ZNF235Q14590 738 aa19.62■□□□□ 0.73
SSU72-204ENST00000378726 GRTP1Q5TC63 336 aa19.62■□□□□ 0.73
SSU72-204ENST00000378726 PLPP4Q5VZY2 271 aa19.62■□□□□ 0.73
SSU72-204ENST00000378726 CDHR3Q6ZTQ4 885 aa19.62■□□□□ 0.73
SSU72-204ENST00000378726 SETD3Q86TU7 594 aaPredicted RBP19.62■□□□□ 0.73
SSU72-204ENST00000378726 ELMOD1Q8N336 334 aa19.62■□□□□ 0.73
SSU72-204ENST00000378726 TEX9Q8N6V9 391 aa19.62■□□□□ 0.73
SSU72-204ENST00000378726 PPHLN1Q8NEY8 458 aaKnown RBP19.62■□□□□ 0.73
SSU72-204ENST00000378726 FAM111AQ96PZ2 611 aa19.62■□□□□ 0.73
SSU72-204ENST00000378726 SRPK1Q96SB4 655 aaKnown RBP19.62■□□□□ 0.73
SSU72-204ENST00000378726 SEMA3CQ99985 751 aa19.62■□□□□ 0.73
SSU72-204ENST00000378726 TRIM55Q9BYV6 548 aa19.62■□□□□ 0.73
SSU72-204ENST00000378726 POLR1EQ9GZS1 481 aaKnown RBP19.62■□□□□ 0.73
SSU72-204ENST00000378726 MCOLN1Q9GZU1 580 aa19.62■□□□□ 0.73
SSU72-204ENST00000378726 IQCGQ9H095 443 aaKnown RBP19.62■□□□□ 0.73
SSU72-204ENST00000378726 TBC1D30Q9Y2I9 924 aa19.62■□□□□ 0.73
SSU72-204ENST00000378726 ACTL7AQ9Y615 435 aa19.62■□□□□ 0.73
SSU72-204ENST00000378726 ANAPC1Q9H1A4 1944 aa19.62■□□□□ 0.73
SSU72-204ENST00000378726 C2orf71A6NGG8 1288 aa19.61■□□□□ 0.73
SSU72-204ENST00000378726 ITGA2BP08514 1039 aa19.61■□□□□ 0.73
SSU72-204ENST00000378726 ATP6V1C1P21283 382 aa19.61■□□□□ 0.73
SSU72-204ENST00000378726 SERPINB3P29508 390 aa19.61■□□□□ 0.73
SSU72-204ENST00000378726 ARFIP2P53365 341 aa19.61■□□□□ 0.73
SSU72-204ENST00000378726 OXCT1P55809 520 aa19.61■□□□□ 0.73
SSU72-204ENST00000378726 STRA8Q7Z7C7 330 aa19.61■□□□□ 0.73
SSU72-204ENST00000378726 TMC8Q8IU68 726 aa19.61■□□□□ 0.73
SSU72-204ENST00000378726 NDUFAF2Q8N183 169 aa19.61■□□□□ 0.73
SSU72-204ENST00000378726 POF1BQ8WVV4 589 aa19.61■□□□□ 0.73
SSU72-204ENST00000378726 BTBD10Q9BSF8 475 aa19.61■□□□□ 0.73
SSU72-204ENST00000378726 FBXO6Q9NRD1 293 aaPredicted RBP19.61■□□□□ 0.73
SSU72-204ENST00000378726 RPL26L1Q9UNX3 145 aaKnown RBP19.61■□□□□ 0.73
SSU72-204ENST00000378726 LZTS1Q9Y250 596 aa19.61■□□□□ 0.73
SSU72-204ENST00000378726 GOLGA8TH3BQL2 631 aa19.61■□□□□ 0.73
SSU72-204ENST00000378726 MUSKO15146 869 aa19.61■□□□□ 0.73
SSU72-204ENST00000378726 GREM1O60565 184 aa19.61■□□□□ 0.73
SSU72-204ENST00000378726 HNRNPCL1O60812 293 aaKnown RBP19.61■□□□□ 0.73
SSU72-204ENST00000378726 CCDC22O60826 627 aa19.61■□□□□ 0.73
SSU72-204ENST00000378726 LATS1O95835 1130 aa19.61■□□□□ 0.73
SSU72-204ENST00000378726 GLUD1P00367 558 aa19.61■□□□□ 0.73
SSU72-204ENST00000378726 LINGO3P0C6S8 592 aa19.61■□□□□ 0.73
SSU72-204ENST00000378726 GLDCP23378 1020 aa19.61■□□□□ 0.73
SSU72-204ENST00000378726 DNAJB1P25685 340 aa19.61■□□□□ 0.73
SSU72-204ENST00000378726 GCKP35557 465 aa19.61■□□□□ 0.73
SSU72-204ENST00000378726 ETV4P43268 484 aa19.61■□□□□ 0.73
SSU72-204ENST00000378726 PDE1BQ01064 536 aa19.61■□□□□ 0.73
SSU72-204ENST00000378726 NAIF1Q69YI7 327 aaPredicted RBP19.61■□□□□ 0.73
SSU72-204ENST00000378726 ESRP1Q6NXG1 681 aaKnown RBP19.61■□□□□ 0.73
SSU72-204ENST00000378726 SPPL3Q8TCT6 385 aa19.61■□□□□ 0.73
SSU72-204ENST00000378726 TADA1Q96BN2 335 aa19.61■□□□□ 0.73
SSU72-204ENST00000378726 TMEM120AQ9BXJ8 343 aa19.61■□□□□ 0.73
SSU72-204ENST00000378726 DCLRE1BQ9H816 532 aa19.61■□□□□ 0.73
SSU72-204ENST00000378726 ATP13A1Q9HD20 1204 aa19.61■□□□□ 0.73
SSU72-204ENST00000378726 IARS2Q9NSE4 1012 aaKnown RBP19.61■□□□□ 0.73
SSU72-204ENST00000378726 TCAF1Q9Y4C2 921 aa19.61■□□□□ 0.73
SSU72-204ENST00000378726 GSC2O15499 205 aa19.6■□□□□ 0.73
SSU72-204ENST00000378726 GJB3O75712 270 aa19.6■□□□□ 0.73
SSU72-204ENST00000378726 CKMP06732 381 aa19.6■□□□□ 0.73
SSU72-204ENST00000378726 DHRS4L1P0CG22 281 aa19.6■□□□□ 0.73
SSU72-204ENST00000378726 GJA1P17302 382 aa19.6■□□□□ 0.73
SSU72-204ENST00000378726 BGNP21810 368 aa19.6■□□□□ 0.73
SSU72-204ENST00000378726 CCNFP41002 786 aa19.6■□□□□ 0.73
SSU72-204ENST00000378726 RNF219Q5W0B1 726 aaPredicted RBP19.6■□□□□ 0.73
SSU72-204ENST00000378726 PDPK2PQ6A1A2 396 aa19.6■□□□□ 0.73
SSU72-204ENST00000378726 BBS5Q8N3I7 341 aa19.6■□□□□ 0.73
SSU72-204ENST00000378726 ARMC2Q8NEN0 867 aa19.6■□□□□ 0.73
SSU72-204ENST00000378726 SLC22A17Q8WUG5 538 aa19.6■□□□□ 0.73
SSU72-204ENST00000378726 PTCD2Q8WV60 388 aaKnown RBP19.6■□□□□ 0.73
SSU72-204ENST00000378726 SKA1Q96BD8 255 aa19.6■□□□□ 0.73
SSU72-204ENST00000378726 TMA16Q96EY4 203 aaKnown RBP19.6■□□□□ 0.73
SSU72-204ENST00000378726 NSL1Q96IY1 281 aa19.6■□□□□ 0.73
SSU72-204ENST00000378726 CORO1BQ9BR76 489 aa19.6■□□□□ 0.73
SSU72-204ENST00000378726 PCMTD2Q9NV79 361 aa19.6■□□□□ 0.73
SSU72-204ENST00000378726 PLLPQ9Y342 182 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms