RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 SMIM10L2BP0DMW5 78 aa16.77■□□□□ 0.28
PCDHA1-201ENST00000378133 KCNE1P15382 129 aa16.77■□□□□ 0.28
PCDHA1-201ENST00000378133 PORP16435 677 aaPredicted RBP16.77■□□□□ 0.28
PCDHA1-201ENST00000378133 AVPR1AP37288 418 aa16.77■□□□□ 0.28
PCDHA1-201ENST00000378133 ARL13AQ5H913 290 aaPredicted RBP16.77■□□□□ 0.28
PCDHA1-201ENST00000378133 TMEM151AQ8N4L1 468 aa16.77■□□□□ 0.28
PCDHA1-201ENST00000378133 C17orf50Q8WW18 174 aa16.77■□□□□ 0.28
PCDHA1-201ENST00000378133 ASB9Q96DX5 294 aa16.77■□□□□ 0.28
PCDHA1-201ENST00000378133 SLC9A7Q96T83 725 aa16.77■□□□□ 0.28
PCDHA1-201ENST00000378133 DCUN1D5Q9BTE7 237 aa16.77■□□□□ 0.28
PCDHA1-201ENST00000378133 PCDHAC1Q9H158 963 aa16.77■□□□□ 0.28
PCDHA1-201ENST00000378133 ZNF385DQ9H6B1 395 aa16.77■□□□□ 0.28
PCDHA1-201ENST00000378133 VPS45Q9NRW7 570 aa16.77■□□□□ 0.28
PCDHA1-201ENST00000378133 DDIT4Q9NX09 232 aa16.77■□□□□ 0.28
PCDHA1-201ENST00000378133 FBXW11Q9UKB1 542 aa16.77■□□□□ 0.28
PCDHA1-201ENST00000378133 TLK1Q9UKI8 766 aa16.77■□□□□ 0.28
PCDHA1-201ENST00000378133 SLC8A2Q9UPR5 921 aa16.77■□□□□ 0.28
PCDHA1-201ENST00000378133 MAGEB16A2A368 324 aa16.76■□□□□ 0.27
PCDHA1-201ENST00000378133 SBK3P0C264 359 aa16.76■□□□□ 0.27
PCDHA1-201ENST00000378133 USP17L7P0C7H9 530 aa16.76■□□□□ 0.27
PCDHA1-201ENST00000378133 NPY2RP49146 381 aa16.76■□□□□ 0.27
PCDHA1-201ENST00000378133 NAGLUP54802 743 aa16.76■□□□□ 0.27
PCDHA1-201ENST00000378133 TRIM25Q14258 630 aaKnown RBP16.76■□□□□ 0.27
PCDHA1-201ENST00000378133 GPRIN1Q7Z2K8 1008 aa16.76■□□□□ 0.27
PCDHA1-201ENST00000378133 CNTD1Q8N815 330 aa16.76■□□□□ 0.27
PCDHA1-201ENST00000378133 HM13Q8TCT9 377 aa16.76■□□□□ 0.27
PCDHA1-201ENST00000378133 RSPH1Q8WYR4 309 aa16.76■□□□□ 0.27
PCDHA1-201ENST00000378133 CIB1Q99828 191 aa16.76■□□□□ 0.27
PCDHA1-201ENST00000378133 DRC3Q9H069 523 aa16.76■□□□□ 0.27
PCDHA1-201ENST00000378133 ZDHHC2Q9UIJ5 367 aa16.76■□□□□ 0.27
PCDHA1-201ENST00000378133 TCAF2A6NFQ2 919 aa16.76■□□□□ 0.27
PCDHA1-201ENST00000378133 NCAM2O15394 837 aa16.76■□□□□ 0.27
PCDHA1-201ENST00000378133 BMP10O95393 424 aa16.76■□□□□ 0.27
PCDHA1-201ENST00000378133 CSE1LP55060 971 aaKnown RBP16.76■□□□□ 0.27
PCDHA1-201ENST00000378133 BTG3Q14201 252 aaPredicted RBP16.76■□□□□ 0.27
PCDHA1-201ENST00000378133 USP10Q14694 798 aaKnown RBP16.76■□□□□ 0.27
PCDHA1-201ENST00000378133 ANKDD1AQ495B1 522 aa16.76■□□□□ 0.27
PCDHA1-201ENST00000378133 UBXN11Q5T124 520 aa16.76■□□□□ 0.27
PCDHA1-201ENST00000378133 TOP6BLQ8N6T0 577 aa16.76■□□□□ 0.27
PCDHA1-201ENST00000378133 ISOC1Q96CN7 298 aa16.76■□□□□ 0.27
PCDHA1-201ENST00000378133 CELF6Q96J87 481 aaKnown RBP16.76■□□□□ 0.27
PCDHA1-201ENST00000378133 SCYL1Q96KG9 808 aa16.76■□□□□ 0.27
PCDHA1-201ENST00000378133 MCMBPQ9BTE3 642 aa16.76■□□□□ 0.27
PCDHA1-201ENST00000378133 IL22Q9GZX6 179 aa16.76■□□□□ 0.27
PCDHA1-201ENST00000378133 PFDN4Q9NQP4 134 aa16.76■□□□□ 0.27
PCDHA1-201ENST00000378133 RUVBL2Q9Y230 463 aaKnown RBP16.76■□□□□ 0.27
PCDHA1-201ENST00000378133 CROCCQ5TZA2 2017 aa16.76■□□□□ 0.27
PCDHA1-201ENST00000378133 KANSL1LA0AUZ9 987 aa16.76■□□□□ 0.27
PCDHA1-201ENST00000378133 ERI2A8K979 691 aaKnown RBP16.76■□□□□ 0.27
PCDHA1-201ENST00000378133 PLOD2O00469 737 aa16.76■□□□□ 0.27
PCDHA1-201ENST00000378133 DYNC1LI2O43237 492 aaPredicted RBP16.76■□□□□ 0.27
PCDHA1-201ENST00000378133 TFPTP0C1Z6 253 aa16.76■□□□□ 0.27
PCDHA1-201ENST00000378133 DAOAP59103 153 aa16.76■□□□□ 0.27
PCDHA1-201ENST00000378133 CDC42EP1Q00587 391 aa16.76■□□□□ 0.27
PCDHA1-201ENST00000378133 SNX17Q15036 470 aa16.76■□□□□ 0.27
PCDHA1-201ENST00000378133 ANO4Q32M45 955 aa16.76■□□□□ 0.27
PCDHA1-201ENST00000378133 XKR4Q5GH76 650 aa16.76■□□□□ 0.27
PCDHA1-201ENST00000378133 MTX3Q5HYI7 312 aa16.76■□□□□ 0.27
PCDHA1-201ENST00000378133 OTOP3Q7RTS5 596 aa16.76■□□□□ 0.27
PCDHA1-201ENST00000378133 LZTR1Q8N653 840 aa16.76■□□□□ 0.27
PCDHA1-201ENST00000378133 PCDH20Q8N6Y1 951 aaKnown RBP16.76■□□□□ 0.27
PCDHA1-201ENST00000378133 USP33Q8TEY7 942 aa16.76■□□□□ 0.27
PCDHA1-201ENST00000378133 EDEM1Q92611 657 aa16.76■□□□□ 0.27
PCDHA1-201ENST00000378133 NTAN1Q96AB6 310 aa16.76■□□□□ 0.27
PCDHA1-201ENST00000378133 HDAC11Q96DB2 347 aa16.76■□□□□ 0.27
PCDHA1-201ENST00000378133 CORO1BQ9BR76 489 aa16.76■□□□□ 0.27
PCDHA1-201ENST00000378133 CENPFP49454 3210 aa16.75■□□□□ 0.27
PCDHA1-201ENST00000378133 BPTFQ12830 3046 aa16.75■□□□□ 0.27
PCDHA1-201ENST00000378133 C9IYK1 514 aa16.75■□□□□ 0.27
PCDHA1-201ENST00000378133 FOXD2O60548 495 aaPredicted RBP16.75■□□□□ 0.27
PCDHA1-201ENST00000378133 CAPN15O75808 1086 aa16.75■□□□□ 0.27
PCDHA1-201ENST00000378133 HOXD8P13378 290 aaPredicted RBP16.75■□□□□ 0.27
PCDHA1-201ENST00000378133 RHDQ02161 417 aa16.75■□□□□ 0.27
PCDHA1-201ENST00000378133 PRKAA1Q13131 559 aa16.75■□□□□ 0.27
PCDHA1-201ENST00000378133 FRG1Q14331 258 aaKnown RBP16.75■□□□□ 0.27
PCDHA1-201ENST00000378133 LIPMQ5VYY2 423 aa16.75■□□□□ 0.27
PCDHA1-201ENST00000378133 GPR180Q86V85 440 aa16.75■□□□□ 0.27
PCDHA1-201ENST00000378133 ZC3HC1Q86WB0 502 aaKnown RBP16.75■□□□□ 0.27
PCDHA1-201ENST00000378133 FIBCD1Q8N539 461 aa16.75■□□□□ 0.27
PCDHA1-201ENST00000378133 KCTD4Q8WVF5 259 aa16.75■□□□□ 0.27
PCDHA1-201ENST00000378133 C12orf43Q96C57 262 aaKnown RBP16.75■□□□□ 0.27
PCDHA1-201ENST00000378133 VPS50Q96JG6 964 aa16.75■□□□□ 0.27
PCDHA1-201ENST00000378133 ZFP42Q96MM3 310 aa16.75■□□□□ 0.27
PCDHA1-201ENST00000378133 C1QTNF1Q9BXJ1 281 aa16.75■□□□□ 0.27
PCDHA1-201ENST00000378133 NOL11Q9H8H0 719 aaKnown RBP16.75■□□□□ 0.27
PCDHA1-201ENST00000378133 CRTAC1Q9NQ79 661 aa16.75■□□□□ 0.27
PCDHA1-201ENST00000378133 TBC1D23Q9NUY8 699 aa16.75■□□□□ 0.27
PCDHA1-201ENST00000378133 TMEM30AQ9NV96 361 aa16.75■□□□□ 0.27
PCDHA1-201ENST00000378133 TRHDEQ9UKU6 1024 aa16.75■□□□□ 0.27
PCDHA1-201ENST00000378133 IPPQ9Y573 584 aa16.75■□□□□ 0.27
PCDHA1-201ENST00000378133 TIMM13Q9Y5L4 95 aaPredicted RBP16.75■□□□□ 0.27
PCDHA1-201ENST00000378133 COPG1Q9Y678 874 aaKnown RBP16.75■□□□□ 0.27
PCDHA1-201ENST00000378133 TSC2P49815 1807 aa16.75■□□□□ 0.27
PCDHA1-201ENST00000378133 PDCD11Q14690 1871 aaKnown RBP16.75■□□□□ 0.27
PCDHA1-201ENST00000378133 JUNP05412 331 aaKnown RBP16.75■□□□□ 0.27
PCDHA1-201ENST00000378133 C8BP07358 591 aa16.75■□□□□ 0.27
PCDHA1-201ENST00000378133 RPL10P27635 214 aaKnown RBP16.75■□□□□ 0.27
PCDHA1-201ENST00000378133 SLC5A3P53794 718 aa16.75■□□□□ 0.27
PCDHA1-201ENST00000378133 PSME3P61289 254 aa16.75■□□□□ 0.27
PCDHA1-201ENST00000378133 PRAMEP78395 509 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms