RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 SLC13A4Q9UKG4 626 aa14.63□□□□□ -0.07
TCOF1-202ENST00000377797 PLLPQ9Y342 182 aa14.63□□□□□ -0.07
TCOF1-202ENST00000377797 CD3EAPO15446 510 aaKnown RBP14.63□□□□□ -0.07
TCOF1-202ENST00000377797 C8AP07357 584 aa14.63□□□□□ -0.07
TCOF1-202ENST00000377797 RPL14P50914 215 aaKnown RBP14.63□□□□□ -0.07
TCOF1-202ENST00000377797 CDH4P55283 916 aa14.63□□□□□ -0.07
TCOF1-202ENST00000377797 GAD2Q05329 585 aa14.63□□□□□ -0.07
TCOF1-202ENST00000377797 ACOX1Q15067 660 aa14.63□□□□□ -0.07
TCOF1-202ENST00000377797 POM121L1PQ3SYA9 428 aa14.63□□□□□ -0.07
TCOF1-202ENST00000377797 PAWRQ96IZ0 340 aaKnown RBP14.63□□□□□ -0.07
TCOF1-202ENST00000377797 C8orf48Q96LL4 319 aa14.63□□□□□ -0.07
TCOF1-202ENST00000377797 PANX3Q96QZ0 392 aa14.63□□□□□ -0.07
TCOF1-202ENST00000377797 LY75O60449 1722 aa14.63□□□□□ -0.07
TCOF1-202ENST00000377797 KATNA1O75449 491 aa14.63□□□□□ -0.07
TCOF1-202ENST00000377797 DNAJC8O75937 253 aaPredicted RBP14.63□□□□□ -0.07
TCOF1-202ENST00000377797 OR56A5P0C7T3 313 aa14.63□□□□□ -0.07
TCOF1-202ENST00000377797 CYP2A6P11509 494 aaPredicted RBP14.63□□□□□ -0.07
TCOF1-202ENST00000377797 TM4SF4P48230 202 aa14.63□□□□□ -0.07
TCOF1-202ENST00000377797 INPP5AQ14642 412 aa14.63□□□□□ -0.07
TCOF1-202ENST00000377797 NR6A1Q15406 480 aa14.63□□□□□ -0.07
TCOF1-202ENST00000377797 GPSM1Q86YR5 675 aa14.63□□□□□ -0.07
TCOF1-202ENST00000377797 NAT16Q8N8M0 369 aa14.63□□□□□ -0.07
TCOF1-202ENST00000377797 TMEM159Q96B96 161 aa14.63□□□□□ -0.07
TCOF1-202ENST00000377797 ASPSCR1Q9BZE9 553 aa14.63□□□□□ -0.07
TCOF1-202ENST00000377797 USP1O94782 785 aa14.62□□□□□ -0.07
TCOF1-202ENST00000377797 HCAR3P49019 387 aa14.62□□□□□ -0.07
TCOF1-202ENST00000377797 ARHGDIAP52565 204 aa14.62□□□□□ -0.07
TCOF1-202ENST00000377797 ESRP1Q6NXG1 681 aaKnown RBP14.62□□□□□ -0.07
TCOF1-202ENST00000377797 FBXL22Q6P050 247 aa14.62□□□□□ -0.07
TCOF1-202ENST00000377797 CNKSR3Q6P9H4 555 aa14.62□□□□□ -0.07
TCOF1-202ENST00000377797 FBXL19Q6PCT2 694 aa14.62□□□□□ -0.07
TCOF1-202ENST00000377797 DNAJB7Q7Z6W7 309 aaPredicted RBP14.62□□□□□ -0.07
TCOF1-202ENST00000377797 METTL3Q86U44 580 aaKnown RBP14.62□□□□□ -0.07
TCOF1-202ENST00000377797 OR4K2Q8NGD2 314 aa14.62□□□□□ -0.07
TCOF1-202ENST00000377797 SPOCK2Q92563 424 aa14.62□□□□□ -0.07
TCOF1-202ENST00000377797 SIKE1Q9BRV8 207 aa14.62□□□□□ -0.07
TCOF1-202ENST00000377797 HTATIP2Q9BUP3 242 aa14.62□□□□□ -0.07
TCOF1-202ENST00000377797 EIF3LQ9Y262 564 aaKnown RBP14.62□□□□□ -0.07
TCOF1-202ENST00000377797 DNM1LO00429 736 aa14.62□□□□□ -0.07
TCOF1-202ENST00000377797 GRIA4P48058 902 aa14.62□□□□□ -0.07
TCOF1-202ENST00000377797 C10orf107Q8IVU9 208 aa14.62□□□□□ -0.07
TCOF1-202ENST00000377797 SUSD6Q92537 303 aa14.62□□□□□ -0.07
TCOF1-202ENST00000377797 CCDC138Q96M89 665 aa14.62□□□□□ -0.07
TCOF1-202ENST00000377797 SMOC2Q9H3U7 446 aa14.62□□□□□ -0.07
TCOF1-202ENST00000377797 PNPLA8Q9NP80 782 aa14.62□□□□□ -0.07
TCOF1-202ENST00000377797 EIF2B3Q9NR50 452 aaKnown RBP14.62□□□□□ -0.07
TCOF1-202ENST00000377797 CLIC5Q9NZA1 410 aa14.62□□□□□ -0.07
TCOF1-202ENST00000377797 ZNF180Q9UJW8 692 aa14.62□□□□□ -0.07
TCOF1-202ENST00000377797 PCDHGC4Q9Y5F7 938 aa14.62□□□□□ -0.07
TCOF1-202ENST00000377797 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.62□□□□□ -0.07
TCOF1-202ENST00000377797 CCL22O00626 93 aa14.62□□□□□ -0.07
TCOF1-202ENST00000377797 CCNG1P51959 295 aa14.62□□□□□ -0.07
TCOF1-202ENST00000377797 MPPE1Q53F39 396 aa14.62□□□□□ -0.07
TCOF1-202ENST00000377797 PPM1JQ5JR12 505 aa14.62□□□□□ -0.07
TCOF1-202ENST00000377797 SMYD5Q6GMV2 418 aa14.62□□□□□ -0.07
TCOF1-202ENST00000377797 TMPRSS6Q8IU80 811 aa14.62□□□□□ -0.07
TCOF1-202ENST00000377797 NKAPQ8N5F7 415 aaKnown RBP14.62□□□□□ -0.07
TCOF1-202ENST00000377797 METTL6Q8TCB7 284 aa14.62□□□□□ -0.07
TCOF1-202ENST00000377797 TBATAQ96M53 351 aa14.62□□□□□ -0.07
TCOF1-202ENST00000377797 TMEM175Q9BSA9 504 aa14.62□□□□□ -0.07
TCOF1-202ENST00000377797 ZNF510Q9Y2H8 683 aa14.62□□□□□ -0.07
TCOF1-202ENST00000377797 MFHAS1Q9Y4C4 1052 aa14.62□□□□□ -0.07
TCOF1-202ENST00000377797 YIPF1Q9Y548 306 aa14.62□□□□□ -0.07
TCOF1-202ENST00000377797 ABHD14A-ACY1A0A1B0GW23 586 aa14.62□□□□□ -0.07
TCOF1-202ENST00000377797 NEDD8-MDP1E9PL57 170 aa14.62□□□□□ -0.07
TCOF1-202ENST00000377797 BIRC5O15392 142 aa14.62□□□□□ -0.07
TCOF1-202ENST00000377797 IL10RBQ08334 325 aa14.62□□□□□ -0.07
TCOF1-202ENST00000377797 RCN1Q15293 331 aa14.62□□□□□ -0.07
TCOF1-202ENST00000377797 AP1ARQ63HQ0 302 aa14.62□□□□□ -0.07
TCOF1-202ENST00000377797 TPGS2Q68CL5 300 aa14.62□□□□□ -0.07
TCOF1-202ENST00000377797 DEFB107AQ8IZN7 70 aa14.62□□□□□ -0.07
TCOF1-202ENST00000377797 KREMEN2Q8NCW0 462 aa14.62□□□□□ -0.07
TCOF1-202ENST00000377797 APPL1Q9UKG1 709 aa14.62□□□□□ -0.07
TCOF1-202ENST00000377797 SCML2Q9UQR0 700 aa14.62□□□□□ -0.07
TCOF1-202ENST00000377797 RAI2Q9Y5P3 530 aa14.62□□□□□ -0.07
TCOF1-202ENST00000377797 ARHGAP10A1A4S6 786 aa14.61□□□□□ -0.07
TCOF1-202ENST00000377797 TBC1D4O60343 1298 aa14.61□□□□□ -0.07
TCOF1-202ENST00000377797 BPGMP07738 259 aa14.61□□□□□ -0.07
TCOF1-202ENST00000377797 NMBRP28336 390 aa14.61□□□□□ -0.07
TCOF1-202ENST00000377797 HALP42357 657 aa14.61□□□□□ -0.07
TCOF1-202ENST00000377797 CHRNA4P43681 627 aa14.61□□□□□ -0.07
TCOF1-202ENST00000377797 HTRA3P83110 453 aa14.61□□□□□ -0.07
TCOF1-202ENST00000377797 HSPA14Q0VDF9 509 aa14.61□□□□□ -0.07
TCOF1-202ENST00000377797 MSLNQ13421 630 aaPredicted RBP14.61□□□□□ -0.07
TCOF1-202ENST00000377797 PTGR2Q8N8N7 351 aaPredicted RBP14.61□□□□□ -0.07
TCOF1-202ENST00000377797 OR10T2Q8NGX3 314 aa14.61□□□□□ -0.07
TCOF1-202ENST00000377797 SOX13Q9UN79 622 aa14.61□□□□□ -0.07
TCOF1-202ENST00000377797 MTMR11A4FU01 709 aa14.61□□□□□ -0.07
TCOF1-202ENST00000377797 AKAP10O43572 662 aa14.61□□□□□ -0.07
TCOF1-202ENST00000377797 GALTP07902 379 aa14.61□□□□□ -0.07
TCOF1-202ENST00000377797 ZNF252P-AS1Q0IIN9 211 aa14.61□□□□□ -0.07
TCOF1-202ENST00000377797 CACHD1Q5VU97 1274 aa14.61□□□□□ -0.07
TCOF1-202ENST00000377797 BNC2Q6ZN30 1099 aaPredicted RBP14.61□□□□□ -0.07
TCOF1-202ENST00000377797 PIWIL4Q7Z3Z4 852 aaKnown RBP14.61□□□□□ -0.07
TCOF1-202ENST00000377797 TCF25Q9BQ70 676 aa14.61□□□□□ -0.07
TCOF1-202ENST00000377797 MRPL57Q9BQC6 102 aaKnown RBP14.61□□□□□ -0.07
TCOF1-202ENST00000377797 ELOVL6Q9H5J4 265 aa14.61□□□□□ -0.07
TCOF1-202ENST00000377797 C11orf49Q9H6J7 331 aa14.61□□□□□ -0.07
TCOF1-202ENST00000377797 GGA2Q9UJY4 613 aa14.61□□□□□ -0.07
TCOF1-202ENST00000377797 TCAF1Q9Y4C2 921 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms