RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 WNT3AP56704 352 aa11.63□□□□□ -0.55
PTCH1-203ENST00000375274 SLC39A12Q504Y0 691 aa11.63□□□□□ -0.55
PTCH1-203ENST00000375274 MTX3Q5HYI7 312 aa11.63□□□□□ -0.55
PTCH1-203ENST00000375274 TYW3Q6IPR3 259 aaKnown RBP11.63□□□□□ -0.55
PTCH1-203ENST00000375274 GK5Q6ZS86 529 aa11.63□□□□□ -0.55
PTCH1-203ENST00000375274 CUZD1Q86UP6 607 aa11.63□□□□□ -0.55
PTCH1-203ENST00000375274 FAM126AQ9BYI3 521 aaPredicted RBP11.63□□□□□ -0.55
PTCH1-203ENST00000375274 NOL11Q9H8H0 719 aaKnown RBP11.63□□□□□ -0.55
PTCH1-203ENST00000375274 DNAJC28Q9NX36 388 aa11.63□□□□□ -0.55
PTCH1-203ENST00000375274 PADI4Q9UM07 663 aa11.63□□□□□ -0.55
PTCH1-203ENST00000375274 NRCAMQ92823 1304 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 DYTNA2CJ06 578 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 H0YGN5 161 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 MDM4O15151 490 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 TBX10O75333 385 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 TPP2P29144 1249 aaPredicted RBP11.62□□□□□ -0.55
PTCH1-203ENST00000375274 PSEN2P49810 448 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 MAXP61244 160 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 SPIRE1Q08AE8 756 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 ACSM2AQ08AH3 577 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 TOP3AQ13472 1001 aaPredicted RBP11.62□□□□□ -0.55
PTCH1-203ENST00000375274 INAQ16352 499 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 CEP78Q5JTW2 689 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 ACSM2BQ68CK6 577 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 HERC6Q8IVU3 1022 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 PGAM4Q8N0Y7 254 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 BTBD9Q96Q07 612 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 CDK5RAP1Q96SZ6 601 aaKnown RBP11.62□□□□□ -0.55
PTCH1-203ENST00000375274 DUSP16Q9BY84 665 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 XPNPEP1Q9NQW7 623 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 SMPD4Q9NXE4 827 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 CPA4Q9UI42 421 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 NFS1Q9Y697 457 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 PDHXO00330 501 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 MFSD11O43934 449 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 CELF2O95319 508 aaKnown RBP11.62□□□□□ -0.55
PTCH1-203ENST00000375274 COL6A2P12110 1019 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 CYP2A7P20853 494 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 IDH2P48735 452 aaKnown RBP11.62□□□□□ -0.55
PTCH1-203ENST00000375274 VGLL4Q14135 290 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 NR1D2Q14995 579 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 TRIP4Q15650 581 aaPredicted RBP11.62□□□□□ -0.55
PTCH1-203ENST00000375274 PERM1Q5SV97 790 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 GJC2Q5T442 439 aaPredicted RBP11.62□□□□□ -0.55
PTCH1-203ENST00000375274 IQSEC1Q6DN90 963 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 AADATQ8N5Z0 425 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 SLC35B2Q8TB61 432 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 SELENOMQ8WWX9 145 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 PANX3Q96QZ0 392 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 GATA5Q9BWX5 397 aaPredicted RBP11.62□□□□□ -0.55
PTCH1-203ENST00000375274 ARL15Q9NXU5 204 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 ENOPH1Q9UHY7 261 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 ZMYND8Q9ULU4 1186 aaPredicted RBP11.62□□□□□ -0.55
PTCH1-203ENST00000375274 MYH10P35580 1976 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 LRG1P02750 347 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 PIRTP0C851 137 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 LIMK2P53671 638 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 TIGD2Q4W5G0 525 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 INO80DQ53TQ3 878 aaPredicted RBP11.62□□□□□ -0.55
PTCH1-203ENST00000375274 FAM171A1Q5VUB5 890 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 TRMT10BQ6PF06 316 aaKnown RBP11.62□□□□□ -0.55
PTCH1-203ENST00000375274 MFSD3Q96ES6 412 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 ACSS2Q9NR19 701 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 CHRAC1Q9NRG0 131 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 TMEM216Q9P0N5 145 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 FADS3Q9Y5Q0 445 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 KPNA6O60684 536 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 IDO1P14902 403 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 STARD3Q14849 445 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 RALGPS1Q5JS13 557 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 PMF1Q6P1K2 205 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.62□□□□□ -0.55
PTCH1-203ENST00000375274 SLC26A9Q7LBE3 791 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 SYTL1Q8IYJ3 562 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 C19orf18Q8NEA5 215 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 GIPC3Q8TF64 312 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 CAMKK2Q96RR4 588 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 NUAK2Q9H093 628 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 EBF2Q9HAK2 575 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 KANSL3Q9P2N6 904 aa11.62□□□□□ -0.55
PTCH1-203ENST00000375274 ULK1O75385 1050 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 DPYSQ14117 519 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 GCNT7Q6ZNI0 430 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 DEFB132Q7Z7B7 95 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 MAB21L3Q8N8X9 362 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 LPGAT1Q92604 370 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 TMEM159Q96B96 161 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 HOPXQ9BPY8 73 aaPredicted RBP11.61□□□□□ -0.55
PTCH1-203ENST00000375274 RAB26Q9ULW5 256 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 POMPQ9Y244 141 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 LOC100506127A0A0U1RQW1 187 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 H3BN98 237 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 TRMUO75648 421 aaKnown RBP11.61□□□□□ -0.55
PTCH1-203ENST00000375274 RTN3O95197 1032 aaPredicted RBP11.61□□□□□ -0.55
PTCH1-203ENST00000375274 EPN2O95208 641 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 PBLDP30039 288 aaPredicted RBP11.61□□□□□ -0.55
PTCH1-203ENST00000375274 ARL2P36404 184 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 LSM3P62310 102 aaKnown RBP11.61□□□□□ -0.55
PTCH1-203ENST00000375274 RALGDSQ12967 914 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 CRY1Q16526 586 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms