RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 CEP295NLQ96MC4 621 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 PEBP4Q96S96 227 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 SP140LQ9H930 580 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 NMRAL1Q9HBL8 299 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.03□□□□□ -0.32
PRPF4-201ENST00000374198 VWA7Q9Y334 891 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 ADAMTSL1Q8N6G6 1762 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 DHRS12A0PJE2 317 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 TPST1O60507 370 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 ALX3O95076 343 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 CRYZL1O95825 349 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 NDUFB10O96000 172 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 HLA-DOAP06340 250 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 UBL4AP11441 157 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 CDH1P12830 882 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 IL10P22301 178 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 ELK4P28324 431 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 GP5P40197 560 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 CLK3P49761 638 aaKnown RBP13.03□□□□□ -0.32
PRPF4-201ENST00000374198 ZNF394Q53GI3 561 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 LINC00523Q86TU6 105 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 CMTR2Q8IYT2 770 aaKnown RBP13.03□□□□□ -0.32
PRPF4-201ENST00000374198 ISL2Q96A47 359 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 BTN2A3PQ96KV6 586 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 NTPCRQ9BSD7 190 aaKnown RBP13.03□□□□□ -0.32
PRPF4-201ENST00000374198 GLIS2Q9BZE0 524 aaPredicted RBP13.03□□□□□ -0.32
PRPF4-201ENST00000374198 EHMT1Q9H9B1 1298 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 SATB2Q9UPW6 733 aa13.03□□□□□ -0.32
PRPF4-201ENST00000374198 AREL1O15033 823 aa13.02□□□□□ -0.32
PRPF4-201ENST00000374198 RFPL2O75678 378 aa13.02□□□□□ -0.32
PRPF4-201ENST00000374198 NTRK1P04629 796 aa13.02□□□□□ -0.32
PRPF4-201ENST00000374198 GSTM2P28161 218 aa13.02□□□□□ -0.32
PRPF4-201ENST00000374198 ACADSBP45954 432 aa13.02□□□□□ -0.32
PRPF4-201ENST00000374198 AP3M2P53677 418 aa13.02□□□□□ -0.32
PRPF4-201ENST00000374198 IRF9Q00978 393 aa13.02□□□□□ -0.32
PRPF4-201ENST00000374198 MAPRE2Q15555 327 aa13.02□□□□□ -0.32
PRPF4-201ENST00000374198 AASDHQ4L235 1098 aaPredicted RBP13.02□□□□□ -0.32
PRPF4-201ENST00000374198 XKR9Q5GH70 373 aa13.02□□□□□ -0.32
PRPF4-201ENST00000374198 PAGE2BQ5JRK9 111 aa13.02□□□□□ -0.32
PRPF4-201ENST00000374198 UBE2UQ5VVX9 321 aa13.02□□□□□ -0.32
PRPF4-201ENST00000374198 DDIASQ8IXT1 998 aa13.02□□□□□ -0.32
PRPF4-201ENST00000374198 SCML4Q8N228 414 aa13.02□□□□□ -0.32
PRPF4-201ENST00000374198 TFAP2BQ92481 460 aa13.02□□□□□ -0.32
PRPF4-201ENST00000374198 VPS33AQ96AX1 596 aa13.02□□□□□ -0.32
PRPF4-201ENST00000374198 GMCL1Q96IK5 515 aa13.02□□□□□ -0.32
PRPF4-201ENST00000374198 FTHL17Q9BXU8 183 aa13.02□□□□□ -0.32
PRPF4-201ENST00000374198 EMILIN2Q9BXX0 1053 aa13.02□□□□□ -0.32
PRPF4-201ENST00000374198 FBXO8Q9NRD0 319 aa13.02□□□□□ -0.32
PRPF4-201ENST00000374198 GMPR2Q9P2T1 348 aaKnown RBP13.02□□□□□ -0.32
PRPF4-201ENST00000374198 HES2Q9Y543 173 aa13.02□□□□□ -0.32
PRPF4-201ENST00000374198 ANGPTL3Q9Y5C1 460 aa13.02□□□□□ -0.32
PRPF4-201ENST00000374198 A0A096LPK6 155 aa13.02□□□□□ -0.33
PRPF4-201ENST00000374198 RNF103O00237 685 aa13.02□□□□□ -0.33
PRPF4-201ENST00000374198 IDH3BO43837 385 aa13.02□□□□□ -0.33
PRPF4-201ENST00000374198 HDCP19113 662 aa13.02□□□□□ -0.33
PRPF4-201ENST00000374198 RPS9P46781 194 aaKnown RBP13.02□□□□□ -0.33
PRPF4-201ENST00000374198 TUFMP49411 452 aaKnown RBP13.02□□□□□ -0.33
PRPF4-201ENST00000374198 ACOT2P49753 483 aa13.02□□□□□ -0.33
PRPF4-201ENST00000374198 IST1P53990 364 aa13.02□□□□□ -0.33
PRPF4-201ENST00000374198 BCAR1P56945 870 aa13.02□□□□□ -0.33
PRPF4-201ENST00000374198 ADARB1P78563 741 aaKnown RBP13.02□□□□□ -0.33
PRPF4-201ENST00000374198 SPP2Q13103 211 aa13.02□□□□□ -0.33
PRPF4-201ENST00000374198 SLC12A1Q13621 1099 aa13.02□□□□□ -0.33
PRPF4-201ENST00000374198 ZBTB41Q5SVQ8 909 aa13.02□□□□□ -0.33
PRPF4-201ENST00000374198 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.02□□□□□ -0.33
PRPF4-201ENST00000374198 GRTP1Q5TC63 336 aa13.02□□□□□ -0.33
PRPF4-201ENST00000374198 LIPMQ5VYY2 423 aa13.02□□□□□ -0.33
PRPF4-201ENST00000374198 CLEC14AQ86T13 490 aa13.02□□□□□ -0.33
PRPF4-201ENST00000374198 PIGZQ86VD9 579 aa13.02□□□□□ -0.33
PRPF4-201ENST00000374198 CERS5Q8N5B7 392 aa13.02□□□□□ -0.33
PRPF4-201ENST00000374198 CDK5RAP1Q96SZ6 601 aaKnown RBP13.02□□□□□ -0.33
PRPF4-201ENST00000374198 OR2B2Q9GZK3 357 aa13.02□□□□□ -0.33
PRPF4-201ENST00000374198 IL22Q9GZX6 179 aa13.02□□□□□ -0.33
PRPF4-201ENST00000374198 SNAP29O95721 258 aa13.01□□□□□ -0.33
PRPF4-201ENST00000374198 HMGCRP04035 888 aa13.01□□□□□ -0.33
PRPF4-201ENST00000374198 ITGB5P18084 799 aa13.01□□□□□ -0.33
PRPF4-201ENST00000374198 TGM2P21980 687 aa13.01□□□□□ -0.33
PRPF4-201ENST00000374198 HTR1BP28222 390 aa13.01□□□□□ -0.33
PRPF4-201ENST00000374198 ECT2LQ008S8 904 aa13.01□□□□□ -0.33
PRPF4-201ENST00000374198 ILF2Q12905 390 aaKnown RBP13.01□□□□□ -0.33
PRPF4-201ENST00000374198 INPP5AQ14642 412 aa13.01□□□□□ -0.33
PRPF4-201ENST00000374198 CBX2Q14781 532 aaPredicted RBP13.01□□□□□ -0.33
PRPF4-201ENST00000374198 UGCGQ16739 394 aa13.01□□□□□ -0.33
PRPF4-201ENST00000374198 DENND1BQ6P3S1 775 aa13.01□□□□□ -0.33
PRPF4-201ENST00000374198 LAYNQ6UX15 382 aa13.01□□□□□ -0.33
PRPF4-201ENST00000374198 FAM20CQ8IXL6 584 aa13.01□□□□□ -0.33
PRPF4-201ENST00000374198 PELI3Q8N2H9 469 aa13.01□□□□□ -0.33
PRPF4-201ENST00000374198 CXorf38Q8TB03 319 aa13.01□□□□□ -0.33
PRPF4-201ENST00000374198 HMGCLL1Q8TB92 370 aa13.01□□□□□ -0.33
PRPF4-201ENST00000374198 MAGEE2Q8TD90 523 aaPredicted RBP13.01□□□□□ -0.33
PRPF4-201ENST00000374198 HTRA1Q92743 480 aa13.01□□□□□ -0.33
PRPF4-201ENST00000374198 DHX35Q9H5Z1 703 aaKnown RBP13.01□□□□□ -0.33
PRPF4-201ENST00000374198 TBC1D13Q9NVG8 400 aa13.01□□□□□ -0.33
PRPF4-201ENST00000374198 GGA3Q9NZ52 723 aa13.01□□□□□ -0.33
PRPF4-201ENST00000374198 ADAM28Q9UKQ2 775 aa13.01□□□□□ -0.33
PRPF4-201ENST00000374198 PRR12Q9ULL5 1215 aa13.01□□□□□ -0.33
PRPF4-201ENST00000374198 AQP12BA6NM10 295 aa13.01□□□□□ -0.33
PRPF4-201ENST00000374198 TBKBP1A7MCY6 615 aa13.01□□□□□ -0.33
PRPF4-201ENST00000374198 APOL1O14791 398 aa13.01□□□□□ -0.33
PRPF4-201ENST00000374198 DHX15O43143 795 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms