RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 MED26O95402 600 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 CALCAP01258 141 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 KDELR1P24390 212 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 MGAT1P26572 445 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 HIRAP54198 1017 aaPredicted RBP13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 FUT2Q10981 343 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 BOP1Q14137 746 aaKnown RBP13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 BMT2Q1RMZ1 405 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 KCNMB4Q86W47 210 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 CPNE1Q99829 537 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 DCUN1D5Q9BTE7 237 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 C11orf49Q9H6J7 331 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 WDR41Q9HAD4 459 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 CACNA2D2Q9NY47 1150 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 POLG2Q9UHN1 485 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 TMCC2O75069 709 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 UNC5CO95185 931 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 LDLRP01130 860 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 MAGEA6P43360 314 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 MAPK8P45983 427 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 CHN2P52757 468 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 SMAD3P84022 425 aaKnown RBP13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 BNC1Q01954 994 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 VAC14Q08AM6 782 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 MTSS1LQ765P7 747 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 KATNAL2Q8IYT4 538 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 ATG16L2Q8NAA4 619 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 GPR152Q8TDT2 470 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 NSMCE2Q96MF7 247 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 SPRTNQ9H040 489 aaPredicted RBP13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 ARMCX1Q9P291 453 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 ATP6V1G1O75348 118 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 GPC1P35052 558 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 CDC16Q13042 620 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 C1DQ13901 141 aaKnown RBP13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 FASTKQ14296 549 aaKnown RBP13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 PGS1Q32NB8 556 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 METTL3Q86U44 580 aaKnown RBP13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 NPAS4Q8IUM7 802 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 SPPL2BQ8TCT7 592 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 EFR3BQ9Y2G0 817 aa13.43□□□□□ -0.26
RAPGEF1-201ENST00000372189 C2orf74A8MZ97 194 aa13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 APOC4-APOC2K7ER74 178 aa13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 CASC3O15234 703 aaKnown RBP13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 TOP3BO95985 862 aaKnown RBP13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 APOC2P02655 101 aa13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 CHI3L1P36222 383 aaPredicted RBP13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 EID3Q8N140 333 aa13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 FAM120BQ96EK7 910 aaKnown RBP13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 ZFP42Q96MM3 310 aa13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 PANX3Q96QZ0 392 aa13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 ACTL7BQ9Y614 415 aa13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 IGKV6D-41A0A0C4DH26 115 aa13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 SMIM28A0A1B0GU29 152 aa13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 TRDMT1O14717 391 aaKnown RBP13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 TARBP2Q15633 366 aaKnown RBP13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 KYAT3Q6YP21 454 aaKnown RBP13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 FAM71AQ8IYT1 594 aa13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 SETD9Q8NE22 299 aa13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 SPATA20Q8TB22 786 aa13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 COL20A1Q9P218 1284 aa13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 ZNF225Q9UK10 706 aa13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 SORCS3Q9UPU3 1222 aa13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 SIK3Q9Y2K2 1263 aa13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 STON1Q9Y6Q2 735 aa13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 FAM237AA0A1B0GTK4 181 aa13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 METTL21EPA6NDL7 271 aa13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 PSMD12O00232 456 aaPredicted RBP13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 TSPAN1O60635 241 aa13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 GSTT1P30711 240 aa13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 SERPINH1P50454 418 aaKnown RBP13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 CCNG1P51959 295 aa13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 NEDD8Q15843 81 aa13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 ZACNQ401N2 412 aa13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 TMIEQ8NEW7 156 aa13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 RGS18Q9NS28 235 aa13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 AKAP7Q9P0M2 348 aaPredicted RBP13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 C9IYK1 514 aa13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 IFNA16P05015 189 aa13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 PRG2P13727 222 aa13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 ITGAXP20702 1163 aa13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 SSTR1P30872 391 aa13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 GJA9P57773 515 aa13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 MRPS5P82675 430 aaKnown RBP13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 DUSP4Q13115 394 aa13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 RASSF6Q6ZTQ3 369 aa13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 MAB21L3Q8N8X9 362 aa13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 DNAJC18Q9H819 358 aa13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 CYLDQ9NQC7 956 aa13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 NDUFAF1Q9Y375 327 aa13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 TPRKBQ9Y3C4 175 aa13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 CHD2O14647 1828 aaKnown RBP13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 CCL16O15467 120 aa13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 TLR5O60602 858 aa13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 BNIPLQ7Z465 357 aa13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 SYTL1Q8IYJ3 562 aa13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 RORBQ92753 470 aa13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 XKR8Q9H6D3 395 aa13.42□□□□□ -0.26
RAPGEF1-201ENST00000372189 MGAT4DA6NG13 374 aa13.41□□□□□ -0.26
RAPGEF1-201ENST00000372189 LRRC10BA6NIK2 292 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms