RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 SEMA4AQ9H3S1 761 aa12.44□□□□□ -0.42
TUBE1-202ENST00000368662 SAMD15Q9P1V8 674 aa12.44□□□□□ -0.42
TUBE1-202ENST00000368662 RAI2Q9Y5P3 530 aa12.44□□□□□ -0.42
TUBE1-202ENST00000368662 TEX264Q9Y6I9 313 aa12.44□□□□□ -0.42
TUBE1-202ENST00000368662 A0A1W2PQ67 120 aa12.43□□□□□ -0.42
TUBE1-202ENST00000368662 WASH3PC4AMC7 463 aa12.43□□□□□ -0.42
TUBE1-202ENST00000368662 ATP8B1O43520 1251 aa12.43□□□□□ -0.42
TUBE1-202ENST00000368662 SPAG6O75602 509 aa12.43□□□□□ -0.42
TUBE1-202ENST00000368662 GJB3O75712 270 aa12.43□□□□□ -0.42
TUBE1-202ENST00000368662 NDST3O95803 873 aa12.43□□□□□ -0.42
TUBE1-202ENST00000368662 ASGR2P07307 311 aa12.43□□□□□ -0.42
TUBE1-202ENST00000368662 HSD17B3P37058 310 aa12.43□□□□□ -0.42
TUBE1-202ENST00000368662 SOX9P48436 509 aa12.43□□□□□ -0.42
TUBE1-202ENST00000368662 GALK1P51570 392 aa12.43□□□□□ -0.42
TUBE1-202ENST00000368662 RPL26P61254 145 aaKnown RBP12.43□□□□□ -0.42
TUBE1-202ENST00000368662 CASP8Q14790 479 aa12.43□□□□□ -0.42
TUBE1-202ENST00000368662 FNDC3BQ53EP0 1204 aaKnown RBP12.43□□□□□ -0.42
TUBE1-202ENST00000368662 CFAP58Q5T655 872 aa12.43□□□□□ -0.42
TUBE1-202ENST00000368662 CASC4Q6P4E1 433 aa12.43□□□□□ -0.42
TUBE1-202ENST00000368662 ADHFE1Q8IWW8 467 aa12.43□□□□□ -0.42
TUBE1-202ENST00000368662 PALM2Q8IXS6 379 aa12.43□□□□□ -0.42
TUBE1-202ENST00000368662 PTCD2Q8WV60 388 aaKnown RBP12.43□□□□□ -0.42
TUBE1-202ENST00000368662 LRIG1Q96JA1 1093 aa12.43□□□□□ -0.42
TUBE1-202ENST00000368662 SIGLEC10Q96LC7 697 aa12.43□□□□□ -0.42
TUBE1-202ENST00000368662 EBNA1BP2Q99848 306 aaKnown RBP12.43□□□□□ -0.42
TUBE1-202ENST00000368662 APOL2Q9BQE5 337 aa12.43□□□□□ -0.42
TUBE1-202ENST00000368662 VIPAS39Q9H9C1 493 aa12.43□□□□□ -0.42
TUBE1-202ENST00000368662 HEBP1Q9NRV9 189 aa12.43□□□□□ -0.42
TUBE1-202ENST00000368662 THAP10Q9P2Z0 257 aaPredicted RBP12.43□□□□□ -0.42
TUBE1-202ENST00000368662 EVLQ9UI08 416 aaPredicted RBP12.43□□□□□ -0.42
TUBE1-202ENST00000368662 RPL26L1Q9UNX3 145 aaKnown RBP12.43□□□□□ -0.42
TUBE1-202ENST00000368662 TICRRQ7Z2Z1 1910 aa12.43□□□□□ -0.42
TUBE1-202ENST00000368662 EDDM13A0A1B0GTR0 161 aa12.43□□□□□ -0.42
TUBE1-202ENST00000368662 TTC34A8MYJ7 566 aa12.43□□□□□ -0.42
TUBE1-202ENST00000368662 RIPK2O43353 540 aa12.43□□□□□ -0.42
TUBE1-202ENST00000368662 GSTA2P09210 222 aa12.43□□□□□ -0.42
TUBE1-202ENST00000368662 HNRNPLP14866 589 aaKnown RBP eCLIP12.43□□□□□ -0.42
TUBE1-202ENST00000368662 DRD1P21728 446 aa12.43□□□□□ -0.42
TUBE1-202ENST00000368662 PHBP35232 272 aa12.43□□□□□ -0.42
TUBE1-202ENST00000368662 ELK3P41970 407 aa12.43□□□□□ -0.42
TUBE1-202ENST00000368662 CCNHP51946 323 aaPredicted RBP12.43□□□□□ -0.42
TUBE1-202ENST00000368662 OLIG2Q13516 323 aa12.43□□□□□ -0.42
TUBE1-202ENST00000368662 LAMB3Q13751 1172 aa12.43□□□□□ -0.42
TUBE1-202ENST00000368662 ZNF234Q14588 700 aa12.43□□□□□ -0.42
TUBE1-202ENST00000368662 IHHQ14623 411 aa12.43□□□□□ -0.42
TUBE1-202ENST00000368662 FASTKD3Q14CZ7 662 aaKnown RBP12.43□□□□□ -0.42
TUBE1-202ENST00000368662 KYNUQ16719 465 aa12.43□□□□□ -0.42
TUBE1-202ENST00000368662 HNRNPA1L2Q32P51 320 aaKnown RBP12.43□□□□□ -0.42
TUBE1-202ENST00000368662 DENND2CQ68D51 928 aa12.43□□□□□ -0.42
TUBE1-202ENST00000368662 NAIF1Q69YI7 327 aaPredicted RBP12.43□□□□□ -0.42
TUBE1-202ENST00000368662 DENND5AQ6IQ26 1287 aa12.43□□□□□ -0.42
TUBE1-202ENST00000368662 DPY19L3Q6ZPD9 716 aa12.43□□□□□ -0.42
TUBE1-202ENST00000368662 Q6ZVU0 165 aa12.43□□□□□ -0.42
TUBE1-202ENST00000368662 KDELC2Q7Z4H8 507 aa12.43□□□□□ -0.42
TUBE1-202ENST00000368662 OR2A12Q8NGT7 310 aa12.43□□□□□ -0.42
TUBE1-202ENST00000368662 KCNV2Q8TDN2 545 aa12.43□□□□□ -0.42
TUBE1-202ENST00000368662 STAMBPL1Q96FJ0 436 aa12.43□□□□□ -0.42
TUBE1-202ENST00000368662 C9orf72Q96LT7 481 aa12.43□□□□□ -0.42
TUBE1-202ENST00000368662 ZNF641Q96N77 438 aaPredicted RBP12.43□□□□□ -0.42
TUBE1-202ENST00000368662 TRIB3Q96RU7 358 aa12.43□□□□□ -0.42
TUBE1-202ENST00000368662 NINJ2Q9NZG7 142 aa12.43□□□□□ -0.42
TUBE1-202ENST00000368662 THEGQ9P2T0 379 aa12.43□□□□□ -0.42
TUBE1-202ENST00000368662 PCDHGC4Q9Y5F7 938 aa12.43□□□□□ -0.42
TUBE1-202ENST00000368662 MAD1L1Q9Y6D9 718 aa12.43□□□□□ -0.42
TUBE1-202ENST00000368662 F5P12259 2224 aa12.43□□□□□ -0.42
TUBE1-202ENST00000368662 ABHD2P08910 425 aa12.42□□□□□ -0.42
TUBE1-202ENST00000368662 ATXN1LP0C7T5 689 aaKnown RBP12.42□□□□□ -0.42
TUBE1-202ENST00000368662 ALADP13716 330 aa12.42□□□□□ -0.42
TUBE1-202ENST00000368662 PGAM1P18669 254 aa12.42□□□□□ -0.42
TUBE1-202ENST00000368662 MGAT1P26572 445 aa12.42□□□□□ -0.42
TUBE1-202ENST00000368662 GRSF1Q12849 480 aaKnown RBP eCLIP12.42□□□□□ -0.42
TUBE1-202ENST00000368662 MTM1Q13496 603 aa12.42□□□□□ -0.42
TUBE1-202ENST00000368662 ARMC12Q5T9G4 340 aa12.42□□□□□ -0.42
TUBE1-202ENST00000368662 SERPINA13PQ6UXR4 307 aa12.42□□□□□ -0.42
TUBE1-202ENST00000368662 ANKMY2Q8IV38 441 aa12.42□□□□□ -0.42
TUBE1-202ENST00000368662 HEPHQ9BQS7 1158 aa12.42□□□□□ -0.42
TUBE1-202ENST00000368662 OSBPL1AQ9BXW6 950 aa12.42□□□□□ -0.42
TUBE1-202ENST00000368662 TMEM245Q9H330 911 aa12.42□□□□□ -0.42
TUBE1-202ENST00000368662 LRRC4CQ9HCJ2 640 aa12.42□□□□□ -0.42
TUBE1-202ENST00000368662 PIH1D1Q9NWS0 290 aaKnown RBP12.42□□□□□ -0.42
TUBE1-202ENST00000368662 ZC3H7BQ9UGR2 993 aaKnown RBP12.42□□□□□ -0.42
TUBE1-202ENST00000368662 SUN2Q9UH99 717 aa12.42□□□□□ -0.42
TUBE1-202ENST00000368662 CHMP2BQ9UQN3 213 aa12.42□□□□□ -0.42
TUBE1-202ENST00000368662 MIA3Q5JRA6 1907 aa12.41□□□□□ -0.42
TUBE1-202ENST00000368662 TRAFD1O14545 582 aaPredicted RBP12.41□□□□□ -0.42
TUBE1-202ENST00000368662 HTRA2O43464 458 aaPredicted RBP12.41□□□□□ -0.42
TUBE1-202ENST00000368662 BNIP3LO60238 219 aa12.41□□□□□ -0.42
TUBE1-202ENST00000368662 FZD6O60353 706 aa12.41□□□□□ -0.42
TUBE1-202ENST00000368662 BANF1O75531 89 aa12.41□□□□□ -0.42
TUBE1-202ENST00000368662 POLBP06746 335 aa12.41□□□□□ -0.42
TUBE1-202ENST00000368662 TRAF2Q12933 501 aa12.41□□□□□ -0.42
TUBE1-202ENST00000368662 TMEM196Q5HYL7 178 aa12.41□□□□□ -0.42
TUBE1-202ENST00000368662 PCID2Q5JVF3 399 aa12.41□□□□□ -0.42
TUBE1-202ENST00000368662 SIRPB2Q5JXA9 342 aa12.41□□□□□ -0.42
TUBE1-202ENST00000368662 ALS2CLQ60I27 953 aa12.41□□□□□ -0.42
TUBE1-202ENST00000368662 NDUFAF2Q8N183 169 aa12.41□□□□□ -0.42
TUBE1-202ENST00000368662 SLC25A41Q8N5S1 370 aa12.41□□□□□ -0.42
TUBE1-202ENST00000368662 PPHLN1Q8NEY8 458 aaKnown RBP12.41□□□□□ -0.42
TUBE1-202ENST00000368662 OR6K2Q8NGY2 324 aa12.41□□□□□ -0.42
TUBE1-202ENST00000368662 PDCD6IPQ8WUM4 868 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms