RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 OTUD4Q01804 1114 aaKnown RBP8.97□□□□□ -0.97
TPM3-213ENST00000368545 CAV1Q03135 178 aa8.97□□□□□ -0.97
TPM3-213ENST00000368545 SCAPQ12770 1279 aa8.97□□□□□ -0.97
TPM3-213ENST00000368545 BTG3Q14201 252 aaPredicted RBP8.97□□□□□ -0.97
TPM3-213ENST00000368545 OASLQ15646 514 aaKnown RBP8.97□□□□□ -0.97
TPM3-213ENST00000368545 ARL13BQ3SXY8 428 aa8.97□□□□□ -0.97
TPM3-213ENST00000368545 ANKRD20A8PQ5CZ79 823 aa8.97□□□□□ -0.97
TPM3-213ENST00000368545 SYPL2Q5VXT5 272 aa8.97□□□□□ -0.97
TPM3-213ENST00000368545 BSPRYQ5W0U4 402 aa8.97□□□□□ -0.97
TPM3-213ENST00000368545 LAIR1Q6GTX8 287 aa8.97□□□□□ -0.97
TPM3-213ENST00000368545 SLC8B1Q6J4K2 584 aa8.97□□□□□ -0.97
TPM3-213ENST00000368545 GSTA5Q7RTV2 222 aa8.97□□□□□ -0.97
TPM3-213ENST00000368545 OVCH1Q7RTY7 1134 aa8.97□□□□□ -0.97
TPM3-213ENST00000368545 FAM131BQ86XD5 332 aa8.97□□□□□ -0.97
TPM3-213ENST00000368545 FLCNQ8NFG4 579 aa8.97□□□□□ -0.97
TPM3-213ENST00000368545 SLC35B2Q8TB61 432 aa8.97□□□□□ -0.97
TPM3-213ENST00000368545 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.97□□□□□ -0.972e-8■■■■□ 26.5
TPM3-213ENST00000368545 P3H4Q92791 437 aa8.97□□□□□ -0.97
TPM3-213ENST00000368545 SNF8Q96H20 258 aa8.97□□□□□ -0.97
TPM3-213ENST00000368545 TMEM169Q96HH4 297 aa8.97□□□□□ -0.97
TPM3-213ENST00000368545 SPATA17Q96L03 361 aa8.97□□□□□ -0.97
TPM3-213ENST00000368545 TRIM31Q9BZY9 425 aa8.97□□□□□ -0.97
TPM3-213ENST00000368545 DHX35Q9H5Z1 703 aaKnown RBP8.97□□□□□ -0.97
TPM3-213ENST00000368545 OXSMQ9NWU1 459 aa8.97□□□□□ -0.97
TPM3-213ENST00000368545 MTRF1LQ9UGC7 380 aaKnown RBP8.97□□□□□ -0.97
TPM3-213ENST00000368545 ASIC3Q9UHC3 531 aa8.97□□□□□ -0.97
TPM3-213ENST00000368545 DNPEPQ9ULA0 475 aa8.97□□□□□ -0.97
TPM3-213ENST00000368545 SCML2Q9UQR0 700 aa8.97□□□□□ -0.97
TPM3-213ENST00000368545 ZNF148Q9UQR1 794 aa8.97□□□□□ -0.97
TPM3-213ENST00000368545 ACTL7BQ9Y614 415 aa8.97□□□□□ -0.97
TPM3-213ENST00000368545 ATG2AQ2TAZ0 1938 aa8.97□□□□□ -0.97
TPM3-213ENST00000368545 MEGF11A6BM72 1044 aa8.96□□□□□ -0.97
TPM3-213ENST00000368545 TGM5O43548 720 aa8.96□□□□□ -0.97
TPM3-213ENST00000368545 H2AFYO75367 372 aaKnown RBP8.96□□□□□ -0.97
TPM3-213ENST00000368545 ATF2P15336 505 aa8.96□□□□□ -0.97
TPM3-213ENST00000368545 RPL21P46778 160 aaKnown RBP8.96□□□□□ -0.97
TPM3-213ENST00000368545 CDR1P51861 262 aa8.96□□□□□ -0.97
TPM3-213ENST00000368545 SCAND1P57086 179 aa8.96□□□□□ -0.97
TPM3-213ENST00000368545 YWHAGP61981 247 aaKnown RBP eCLIP8.96□□□□□ -0.97
TPM3-213ENST00000368545 RPL10AP62906 217 aaKnown RBP8.96□□□□□ -0.97
TPM3-213ENST00000368545 DYNLT1P63172 113 aa8.96□□□□□ -0.97
TPM3-213ENST00000368545 NME3Q13232 169 aa8.96□□□□□ -0.97
TPM3-213ENST00000368545 LRRC32Q14392 662 aa8.96□□□□□ -0.97
TPM3-213ENST00000368545 NOMO1Q15155 1222 aa8.96□□□□□ -0.97
TPM3-213ENST00000368545 PSMD5Q16401 504 aa8.96□□□□□ -0.97
TPM3-213ENST00000368545 PPP6R3Q5H9R7 873 aaPredicted RBP8.96□□□□□ -0.97
TPM3-213ENST00000368545 BTBD8Q5XKL5 378 aa8.96□□□□□ -0.97
TPM3-213ENST00000368545 SLC9A4Q6AI14 798 aa8.96□□□□□ -0.97
TPM3-213ENST00000368545 KIAA1841Q6NSI8 718 aa8.96□□□□□ -0.97
TPM3-213ENST00000368545 SLC39A11Q8N1S5 342 aa8.96□□□□□ -0.97
TPM3-213ENST00000368545 ALLCQ8N6M5 410 aa8.96□□□□□ -0.97
TPM3-213ENST00000368545 CCDC185Q8N715 623 aa8.96□□□□□ -0.97
TPM3-213ENST00000368545 ACTL9Q8TC94 416 aa8.96□□□□□ -0.97
TPM3-213ENST00000368545 BCL7CQ8WUZ0 217 aaPredicted RBP8.96□□□□□ -0.97
TPM3-213ENST00000368545 TTC17Q96AE7 1141 aa8.96□□□□□ -0.97
TPM3-213ENST00000368545 B3GALT6Q96L58 329 aa8.96□□□□□ -0.97
TPM3-213ENST00000368545 PGLYRP2Q96PD5 576 aa8.96□□□□□ -0.97
TPM3-213ENST00000368545 HERC2P3Q9BVR0 1158 aa8.96□□□□□ -0.97
TPM3-213ENST00000368545 FAM204AQ9H8W3 233 aa8.96□□□□□ -0.97
TPM3-213ENST00000368545 CYP4F12Q9HCS2 524 aa8.96□□□□□ -0.97
TPM3-213ENST00000368545 WDR6Q9NNW5 1121 aaKnown RBP8.96□□□□□ -0.97
TPM3-213ENST00000368545 PIGVQ9NUD9 493 aa8.96□□□□□ -0.97
TPM3-213ENST00000368545 GPATCH2LQ9NWQ4 482 aa8.96□□□□□ -0.97
TPM3-213ENST00000368545 DDIT4Q9NX09 232 aa8.96□□□□□ -0.97
TPM3-213ENST00000368545 ZSCAN32Q9NX65 697 aa8.96□□□□□ -0.97
TPM3-213ENST00000368545 PRR13Q9NZ81 148 aa8.96□□□□□ -0.97
TPM3-213ENST00000368545 CALCOCO1Q9P1Z2 691 aa8.96□□□□□ -0.97
TPM3-213ENST00000368545 HSFX1Q9UBD0 423 aa8.96□□□□□ -0.97
TPM3-213ENST00000368545 PHTF1Q9UMS5 762 aa8.96□□□□□ -0.97
TPM3-213ENST00000368545 SNX24Q9Y343 169 aa8.96□□□□□ -0.97
TPM3-213ENST00000368545 ST14Q9Y5Y6 855 aa8.96□□□□□ -0.97
TPM3-213ENST00000368545 FAM92AA1XBS5 289 aa8.96□□□□□ -0.98
TPM3-213ENST00000368545 CFAP69A5D8W1 941 aa8.96□□□□□ -0.98
TPM3-213ENST00000368545 NR2C2P49116 596 aa8.96□□□□□ -0.98
TPM3-213ENST00000368545 CA9Q16790 459 aa8.96□□□□□ -0.98
TPM3-213ENST00000368545 MGAT5BQ3V5L5 792 aa8.96□□□□□ -0.98
TPM3-213ENST00000368545 SPDYCQ5MJ68 293 aa8.96□□□□□ -0.98
TPM3-213ENST00000368545 DENND5BQ6ZUT9 1274 aa8.96□□□□□ -0.98
TPM3-213ENST00000368545 BZW1Q7L1Q6 419 aaKnown RBP8.96□□□□□ -0.98
TPM3-213ENST00000368545 MON1AQ86VX9 555 aa8.96□□□□□ -0.98
TPM3-213ENST00000368545 C1orf210Q8IVY1 113 aa8.96□□□□□ -0.98
TPM3-213ENST00000368545 COLGALT1Q8NBJ5 622 aa8.96□□□□□ -0.98
TPM3-213ENST00000368545 SCAMP5Q8TAC9 235 aa8.96□□□□□ -0.98
TPM3-213ENST00000368545 RIN2Q8WYP3 895 aaPredicted RBP8.96□□□□□ -0.98
TPM3-213ENST00000368545 HAUS1Q96CS2 278 aa8.96□□□□□ -0.98
TPM3-213ENST00000368545 TSPYL1Q9H0U9 437 aa8.96□□□□□ -0.98
TPM3-213ENST00000368545 SMOC2Q9H3U7 446 aa8.96□□□□□ -0.98
TPM3-213ENST00000368545 PCDH9Q9HC56 1237 aa8.96□□□□□ -0.98
TPM3-213ENST00000368545 CASS4Q9NQ75 786 aa8.96□□□□□ -0.98
TPM3-213ENST00000368545 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.96□□□□□ -0.986e-29■■□□□ 14.2
TPM3-213ENST00000368545 SPG21Q9NZD8 308 aa8.96□□□□□ -0.98
TPM3-213ENST00000368545 IL37Q9NZH6 218 aa8.96□□□□□ -0.98
TPM3-213ENST00000368545 GRHL1Q9NZI5 618 aa8.96□□□□□ -0.98
TPM3-213ENST00000368545 FBXW11Q9UKB1 542 aa8.96□□□□□ -0.98
TPM3-213ENST00000368545 HPCAL4Q9UM19 191 aa8.96□□□□□ -0.98
TPM3-213ENST00000368545 NEU2Q9Y3R4 380 aa8.96□□□□□ -0.98
TPM3-213ENST00000368545 CDY1Q9Y6F8 540 aa8.96□□□□□ -0.98
TPM3-213ENST00000368545 LAMA3Q16787 3333 aa8.96□□□□□ -0.98
TPM3-213ENST00000368545 SGK1O00141 431 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 IRAK2O43187 625 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms