RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 FBXL19Q6PCT2 694 aa14.04□□□□□ -0.16
TPM3-211ENST00000368531 ARHGEF18Q6ZSZ5 1173 aa14.04□□□□□ -0.16
TPM3-211ENST00000368531 KDELC2Q7Z4H8 507 aa14.04□□□□□ -0.16
TPM3-211ENST00000368531 DEFB119Q8N690 84 aa14.04□□□□□ -0.16
TPM3-211ENST00000368531 PRSS33Q8NF86 280 aa14.04□□□□□ -0.16
TPM3-211ENST00000368531 PPP1R16AQ96I34 528 aa14.04□□□□□ -0.16
TPM3-211ENST00000368531 SPATA13Q96N96 652 aa14.04□□□□□ -0.16
TPM3-211ENST00000368531 OSBPL1AQ9BXW6 950 aa14.04□□□□□ -0.16
TPM3-211ENST00000368531 SLC25A51Q9H1U9 297 aa14.04□□□□□ -0.16
TPM3-211ENST00000368531 ZSCAN32Q9NX65 697 aa14.04□□□□□ -0.16
TPM3-211ENST00000368531 SCML1Q9UN30 329 aa14.04□□□□□ -0.16
TPM3-211ENST00000368531 DRG1Q9Y295 367 aaKnown RBP14.04□□□□□ -0.16
TPM3-211ENST00000368531 RAI2Q9Y5P3 530 aa14.04□□□□□ -0.16
TPM3-211ENST00000368531 C5orf60A6NFR6 353 aa14.03□□□□□ -0.16
TPM3-211ENST00000368531 C16orf96A6NNT2 1141 aa14.03□□□□□ -0.16
TPM3-211ENST00000368531 MAP3K13O43283 966 aa14.03□□□□□ -0.16
TPM3-211ENST00000368531 PHF2O75151 1096 aa14.03□□□□□ -0.16
TPM3-211ENST00000368531 ZNF217O75362 1048 aa14.03□□□□□ -0.16
TPM3-211ENST00000368531 MT-CYBP00156 380 aaPredicted RBP14.03□□□□□ -0.16
TPM3-211ENST00000368531 PRKCGP05129 697 aa14.03□□□□□ -0.16
TPM3-211ENST00000368531 MMP2P08253 660 aa14.03□□□□□ -0.16
TPM3-211ENST00000368531 SERPINF2P08697 491 aa14.03□□□□□ -0.16
TPM3-211ENST00000368531 ZSCAN5DPP0CG00 497 aa14.03□□□□□ -0.16
TPM3-211ENST00000368531 ITIH2P19823 946 aa14.03□□□□□ -0.16
TPM3-211ENST00000368531 BCKDHBP21953 392 aa14.03□□□□□ -0.16
TPM3-211ENST00000368531 XPAP23025 273 aaPredicted RBP14.03□□□□□ -0.16
TPM3-211ENST00000368531 CES1P23141 567 aa14.03□□□□□ -0.16
TPM3-211ENST00000368531 ITGB7P26010 798 aa14.03□□□□□ -0.16
TPM3-211ENST00000368531 PSMB4P28070 264 aa14.03□□□□□ -0.16
TPM3-211ENST00000368531 STIP1P31948 543 aaKnown RBP14.03□□□□□ -0.16
TPM3-211ENST00000368531 COILP38432 576 aaPredicted RBP14.03□□□□□ -0.16
TPM3-211ENST00000368531 MAPK8P45983 427 aa14.03□□□□□ -0.16
TPM3-211ENST00000368531 SKOR1P84550 965 aa14.03□□□□□ -0.16
TPM3-211ENST00000368531 SEMG2Q02383 582 aa14.03□□□□□ -0.16
TPM3-211ENST00000368531 MAP7D1Q3KQU3 841 aa14.03□□□□□ -0.16
TPM3-211ENST00000368531 FAXCQ5TGI0 409 aa14.03□□□□□ -0.16
TPM3-211ENST00000368531 ALG1LQ6GMV1 187 aa14.03□□□□□ -0.16
TPM3-211ENST00000368531 ITPRIPL1Q6GPH6 555 aa14.03□□□□□ -0.16
TPM3-211ENST00000368531 DRICH1Q6PGQ1 229 aaPredicted RBP14.03□□□□□ -0.16
TPM3-211ENST00000368531 CCDC137Q6PK04 289 aaKnown RBP14.03□□□□□ -0.16
TPM3-211ENST00000368531 ERN2Q76MJ5 926 aaKnown RBP14.03□□□□□ -0.16
TPM3-211ENST00000368531 PARS2Q7L3T8 475 aaKnown RBP14.03□□□□□ -0.16
TPM3-211ENST00000368531 TTC7BQ86TV6 843 aa14.03□□□□□ -0.16
TPM3-211ENST00000368531 PRPF39Q86UA1 669 aaKnown RBP14.03□□□□□ -0.16
TPM3-211ENST00000368531 ZSWIM9Q86XI8 627 aa14.03□□□□□ -0.16
TPM3-211ENST00000368531 KLHL7Q8IXQ5 586 aa14.03□□□□□ -0.16
TPM3-211ENST00000368531 CCDC89Q8N998 374 aa14.03□□□□□ -0.16
TPM3-211ENST00000368531 GLIS1Q8NBF1 620 aa14.03□□□□□ -0.16
TPM3-211ENST00000368531 OR14C36Q8NHC7 312 aa14.03□□□□□ -0.16
TPM3-211ENST00000368531 KIF18AQ8NI77 898 aa14.03□□□□□ -0.16
TPM3-211ENST00000368531 IMP4Q96G21 291 aaKnown RBP14.03□□□□□ -0.16
TPM3-211ENST00000368531 SPACA7Q96KW9 195 aa14.03□□□□□ -0.16
TPM3-211ENST00000368531 ZNF641Q96N77 438 aaPredicted RBP14.03□□□□□ -0.16
TPM3-211ENST00000368531 DDX47Q9H0S4 455 aaKnown RBP14.03□□□□□ -0.16
TPM3-211ENST00000368531 GBA3Q9H227 469 aa14.03□□□□□ -0.16
TPM3-211ENST00000368531 USP36Q9P275 1121 aaKnown RBP14.03□□□□□ -0.16
TPM3-211ENST00000368531 CHKBQ9Y259 395 aa14.03□□□□□ -0.16
TPM3-211ENST00000368531 PCDHB9Q9Y5E1 797 aa14.03□□□□□ -0.16
TPM3-211ENST00000368531 R4GN57 208 aa14.03□□□□□ -0.16
TPM3-211ENST00000368531 THADAQ6YHU6 1953 aa14.03□□□□□ -0.16
TPM3-211ENST00000368531 NUMA1Q14980 2115 aa14.03□□□□□ -0.16
TPM3-211ENST00000368531 ZNF318Q5VUA4 2279 aa14.03□□□□□ -0.16
TPM3-211ENST00000368531 PLXND1Q9Y4D7 1925 aa14.02□□□□□ -0.16
TPM3-211ENST00000368531 IGHV1OR15-9A0A0B4J2B8 117 aa14.02□□□□□ -0.17
TPM3-211ENST00000368531 CCDC163A0A0D9SF12 145 aa14.02□□□□□ -0.17
TPM3-211ENST00000368531 A8MX80 341 aa14.02□□□□□ -0.17
TPM3-211ENST00000368531 HRO43593 1189 aa14.02□□□□□ -0.17
TPM3-211ENST00000368531 OPHN1O60890 802 aa14.02□□□□□ -0.17
TPM3-211ENST00000368531 NDUFS2O75306 463 aa14.02□□□□□ -0.17
TPM3-211ENST00000368531 GCATO75600 419 aa14.02□□□□□ -0.17
TPM3-211ENST00000368531 RPP40O75818 363 aaKnown RBP14.02□□□□□ -0.17
TPM3-211ENST00000368531 TUBB4AP04350 444 aa14.02□□□□□ -0.17
TPM3-211ENST00000368531 TIMP2P16035 220 aa14.02□□□□□ -0.17
TPM3-211ENST00000368531 CD6P30203 668 aa14.02□□□□□ -0.17
TPM3-211ENST00000368531 ACSL1P33121 698 aa14.02□□□□□ -0.17
TPM3-211ENST00000368531 ACTN2P35609 894 aa14.02□□□□□ -0.17
TPM3-211ENST00000368531 P2RY2P41231 377 aa14.02□□□□□ -0.17
TPM3-211ENST00000368531 NEK3P51956 506 aa14.02□□□□□ -0.17
TPM3-211ENST00000368531 TERF1P54274 439 aa14.02□□□□□ -0.17
TPM3-211ENST00000368531 SFSWAPQ12872 951 aaKnown RBP14.02□□□□□ -0.17
TPM3-211ENST00000368531 TRIP13Q15645 432 aaPredicted RBP14.02□□□□□ -0.17
TPM3-211ENST00000368531 CYP1B1Q16678 543 aa14.02□□□□□ -0.17
TPM3-211ENST00000368531 ZNF528Q3MIS6 628 aa14.02□□□□□ -0.17
TPM3-211ENST00000368531 RALGPS1Q5JS13 557 aa14.02□□□□□ -0.17
TPM3-211ENST00000368531 ARMC12Q5T9G4 340 aa14.02□□□□□ -0.17
TPM3-211ENST00000368531 USP30Q70CQ3 517 aa14.02□□□□□ -0.17
TPM3-211ENST00000368531 CEP68Q76N32 757 aa14.02□□□□□ -0.17
TPM3-211ENST00000368531 KBTBD6Q86V97 674 aa14.02□□□□□ -0.17
TPM3-211ENST00000368531 ATL2Q8NHH9 583 aa14.02□□□□□ -0.17
TPM3-211ENST00000368531 TOE1Q96GM8 510 aaKnown RBP14.02□□□□□ -0.17
TPM3-211ENST00000368531 FCRL5Q96RD9 977 aa14.02□□□□□ -0.17
TPM3-211ENST00000368531 GPR174Q9BXC1 333 aa14.02□□□□□ -0.17
TPM3-211ENST00000368531 FAM126AQ9BYI3 521 aaPredicted RBP14.02□□□□□ -0.17
TPM3-211ENST00000368531 BTBD1Q9H0C5 482 aa14.02□□□□□ -0.17
TPM3-211ENST00000368531 RNF14Q9UBS8 474 aa14.02□□□□□ -0.17
TPM3-211ENST00000368531 MBD1Q9UIS9 605 aaPredicted RBP14.02□□□□□ -0.17
TPM3-211ENST00000368531 TRAFD1O14545 582 aaPredicted RBP14.01□□□□□ -0.17
TPM3-211ENST00000368531 SOCS5O75159 536 aa14.01□□□□□ -0.17
TPM3-211ENST00000368531 ZNF189O75820 626 aaPredicted RBP14.01□□□□□ -0.17
TPM3-211ENST00000368531 METTL18O95568 372 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms