RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 FNDC3BQ53EP0 1204 aaKnown RBP20.87■□□□□ 0.93
SHISA4-201ENST00000362011 DGKKQ5KSL6 1271 aa20.87■□□□□ 0.93
SHISA4-201ENST00000362011 KDELC1Q6UW63 502 aa20.87■□□□□ 0.93
SHISA4-201ENST00000362011 CEP128Q6ZU80 1094 aa20.87■□□□□ 0.93
SHISA4-201ENST00000362011 KDM1BQ8NB78 822 aa20.87■□□□□ 0.93
SHISA4-201ENST00000362011 IPMKQ8NFU5 416 aa20.87■□□□□ 0.93
SHISA4-201ENST00000362011 OR2AP1Q8NGE2 309 aa20.87■□□□□ 0.93
SHISA4-201ENST00000362011 MYO19Q96H55 970 aa20.87■□□□□ 0.93
SHISA4-201ENST00000362011 TSPYL1Q9H0U9 437 aa20.87■□□□□ 0.93
SHISA4-201ENST00000362011 TNKS2Q9H2K2 1166 aa20.87■□□□□ 0.93
SHISA4-201ENST00000362011 PPFIA2O75334 1257 aa20.86■□□□□ 0.93
SHISA4-201ENST00000362011 GJB3O75712 270 aa20.86■□□□□ 0.93
SHISA4-201ENST00000362011 TNFRSF4P43489 277 aa20.86■□□□□ 0.93
SHISA4-201ENST00000362011 ARL4CP56559 192 aa20.86■□□□□ 0.93
SHISA4-201ENST00000362011 WNT3AP56704 352 aa20.86■□□□□ 0.93
SHISA4-201ENST00000362011 SPARCL1Q14515 664 aa20.86■□□□□ 0.93
SHISA4-201ENST00000362011 PCSK7Q16549 785 aa20.86■□□□□ 0.93
SHISA4-201ENST00000362011 HIF1AQ16665 826 aa20.86■□□□□ 0.93
SHISA4-201ENST00000362011 NCEH1Q6PIU2 408 aa20.86■□□□□ 0.93
SHISA4-201ENST00000362011 LINC00523Q86TU6 105 aa20.86■□□□□ 0.93
SHISA4-201ENST00000362011 SFTPA1Q8IWL2 248 aa20.86■□□□□ 0.93
SHISA4-201ENST00000362011 AENQ8WTP8 325 aaKnown RBP20.86■□□□□ 0.93
SHISA4-201ENST00000362011 MRGPRX2Q96LB1 330 aa20.86■□□□□ 0.93
SHISA4-201ENST00000362011 TBL1YQ9BQ87 522 aa20.86■□□□□ 0.93
SHISA4-201ENST00000362011 FICDQ9BVA6 458 aa20.86■□□□□ 0.93
SHISA4-201ENST00000362011 FSD1LQ9BXM9 530 aa20.86■□□□□ 0.93
SHISA4-201ENST00000362011 TBC1D17Q9HA65 648 aa20.86■□□□□ 0.93
SHISA4-201ENST00000362011 NOD2Q9HC29 1040 aa20.86■□□□□ 0.93
SHISA4-201ENST00000362011 XAB2Q9HCS7 855 aaKnown RBP20.86■□□□□ 0.93
SHISA4-201ENST00000362011 TTC34A8MYJ7 566 aa20.85■□□□□ 0.93
SHISA4-201ENST00000362011 ZNF821O75541 412 aaPredicted RBP20.85■□□□□ 0.93
SHISA4-201ENST00000362011 LMNAP02545 664 aaKnown RBP20.85■□□□□ 0.93
SHISA4-201ENST00000362011 FAM153BP0C7A2 387 aa20.85■□□□□ 0.93
SHISA4-201ENST00000362011 MAPK8P45983 427 aa20.85■□□□□ 0.93
SHISA4-201ENST00000362011 RECQLP46063 649 aaPredicted RBP20.85■□□□□ 0.93
SHISA4-201ENST00000362011 ZNF234Q14588 700 aa20.85■□□□□ 0.93
SHISA4-201ENST00000362011 PON2Q15165 354 aa20.85■□□□□ 0.93
SHISA4-201ENST00000362011 FAM153CQ494X1 144 aa20.85■□□□□ 0.93
SHISA4-201ENST00000362011 CARD16Q5EG05 197 aa20.85■□□□□ 0.93
SHISA4-201ENST00000362011 LRRC8BQ6P9F7 803 aa20.85■□□□□ 0.93
SHISA4-201ENST00000362011 EMBQ6PCB8 327 aa20.85■□□□□ 0.93
SHISA4-201ENST00000362011 TXNDC11Q6PKC3 985 aa20.85■□□□□ 0.93
SHISA4-201ENST00000362011 CCDC25Q86WR0 208 aa20.85■□□□□ 0.93
SHISA4-201ENST00000362011 PLPP6Q8IY26 295 aa20.85■□□□□ 0.93
SHISA4-201ENST00000362011 RYBPQ8N488 228 aaPredicted RBP20.85■□□□□ 0.93
SHISA4-201ENST00000362011 PWWP2AQ96N64 755 aa20.85■□□□□ 0.93
SHISA4-201ENST00000362011 SERPINB12Q96P63 405 aa20.85■□□□□ 0.93
SHISA4-201ENST00000362011 PHACTR1Q9C0D0 580 aa20.85■□□□□ 0.93
SHISA4-201ENST00000362011 FBRSL1Q9HCM7 1045 aaKnown RBP20.85■□□□□ 0.93
SHISA4-201ENST00000362011 THAP10Q9P2Z0 257 aaPredicted RBP20.85■□□□□ 0.93
SHISA4-201ENST00000362011 EVLQ9UI08 416 aaPredicted RBP20.85■□□□□ 0.93
SHISA4-201ENST00000362011 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.84■□□□□ 0.93
SHISA4-201ENST00000362011 AP3B1O00203 1094 aa20.84■□□□□ 0.93
SHISA4-201ENST00000362011 DYNC1I1O14576 645 aa20.84■□□□□ 0.93
SHISA4-201ENST00000362011 EIF3HO15372 352 aaKnown RBP eCLIP20.84■□□□□ 0.93
SHISA4-201ENST00000362011 BNIP3LO60238 219 aa20.84■□□□□ 0.93
SHISA4-201ENST00000362011 MLNP12872 115 aa20.84■□□□□ 0.93
SHISA4-201ENST00000362011 H2AFXP16104 143 aaPredicted RBP20.84■□□□□ 0.93
SHISA4-201ENST00000362011 CA4P22748 312 aa20.84■□□□□ 0.93
SHISA4-201ENST00000362011 ADRA1AP35348 466 aa20.84■□□□□ 0.93
SHISA4-201ENST00000362011 TNNT3P45378 269 aaPredicted RBP20.84■□□□□ 0.93
SHISA4-201ENST00000362011 RAD51Q06609 339 aa20.84■□□□□ 0.93
SHISA4-201ENST00000362011 IHHQ14623 411 aa20.84■□□□□ 0.93
SHISA4-201ENST00000362011 Q6ZVU0 165 aa20.84■□□□□ 0.93
SHISA4-201ENST00000362011 CENPUQ71F23 418 aa20.84■□□□□ 0.93
SHISA4-201ENST00000362011 ZNF534Q76KX8 674 aa20.84■□□□□ 0.93
SHISA4-201ENST00000362011 PDIK1LQ8N165 341 aa20.84■□□□□ 0.93
SHISA4-201ENST00000362011 FRS2Q8WU20 508 aa20.84■□□□□ 0.93
SHISA4-201ENST00000362011 CAVIN3Q969G5 261 aa20.84■□□□□ 0.93
SHISA4-201ENST00000362011 IFT43Q96FT9 208 aa20.84■□□□□ 0.93
SHISA4-201ENST00000362011 FEM1CQ96JP0 617 aa20.84■□□□□ 0.93
SHISA4-201ENST00000362011 CASS4Q9NQ75 786 aa20.84■□□□□ 0.93
SHISA4-201ENST00000362011 CA14Q9ULX7 337 aa20.84■□□□□ 0.93
SHISA4-201ENST00000362011 STARD13Q9Y3M8 1113 aa20.84■□□□□ 0.93
SHISA4-201ENST00000362011 USP12O75317 370 aa20.83■□□□□ 0.93
SHISA4-201ENST00000362011 DRD1P21728 446 aa20.83■□□□□ 0.93
SHISA4-201ENST00000362011 GRIA1P42261 906 aa20.83■□□□□ 0.93
SHISA4-201ENST00000362011 CCNHP51946 323 aaPredicted RBP20.83■□□□□ 0.93
SHISA4-201ENST00000362011 OLIG2Q13516 323 aa20.83■□□□□ 0.93
SHISA4-201ENST00000362011 SLC44A4Q53GD3 710 aa20.83■□□□□ 0.93
SHISA4-201ENST00000362011 TMEM196Q5HYL7 178 aa20.83■□□□□ 0.93
SHISA4-201ENST00000362011 FNBP1LQ5T0N5 605 aa20.83■□□□□ 0.93
SHISA4-201ENST00000362011 EGFLAMQ63HQ2 1017 aa20.83■□□□□ 0.93
SHISA4-201ENST00000362011 SERPINA13PQ6UXR4 307 aa20.83■□□□□ 0.93
SHISA4-201ENST00000362011 CAND1Q86VP6 1230 aaKnown RBP20.83■□□□□ 0.93
SHISA4-201ENST00000362011 OR52K1Q8NGK4 314 aa20.83■□□□□ 0.93
SHISA4-201ENST00000362011 HNRNPLLQ8WVV9 542 aaKnown RBP20.83■□□□□ 0.93
SHISA4-201ENST00000362011 APOL2Q9BQE5 337 aa20.83■□□□□ 0.93
SHISA4-201ENST00000362011 ARHGEF3Q9NR81 526 aa20.83■□□□□ 0.93
SHISA4-201ENST00000362011 SCN8AQ9UQD0 1980 aa20.83■□□□□ 0.92
SHISA4-201ENST00000362011 K7EQS6 105 aa20.82■□□□□ 0.92
SHISA4-201ENST00000362011 NPC1O15118 1278 aa20.82■□□□□ 0.92
SHISA4-201ENST00000362011 AGTP01019 485 aa20.82■□□□□ 0.92
SHISA4-201ENST00000362011 HNRNPLP14866 589 aaKnown RBP eCLIP20.82■□□□□ 0.92
SHISA4-201ENST00000362011 STARD6P59095 220 aa20.82■□□□□ 0.92
SHISA4-201ENST00000362011 CDK18Q07002 472 aa20.82■□□□□ 0.92
SHISA4-201ENST00000362011 GRSF1Q12849 480 aaKnown RBP eCLIP20.82■□□□□ 0.92
SHISA4-201ENST00000362011 CDH17Q12864 832 aa20.82■□□□□ 0.92
SHISA4-201ENST00000362011 GRM3Q14832 879 aa20.82■□□□□ 0.92
SHISA4-201ENST00000362011 SLMAPQ14BN4 828 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms