RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 DSG1Q02413 1049 aa18.47■□□□□ 0.55
PDLIM7-203ENST00000359895 ASPHQ12797 758 aa18.47■□□□□ 0.55
PDLIM7-203ENST00000359895 MSLNQ13421 630 aaPredicted RBP18.47■□□□□ 0.55
PDLIM7-203ENST00000359895 VEPH1Q14D04 833 aa18.47■□□□□ 0.55
PDLIM7-203ENST00000359895 TAF12Q16514 161 aa18.47■□□□□ 0.55
PDLIM7-203ENST00000359895 TRIM60Q495X7 471 aa18.47■□□□□ 0.55
PDLIM7-203ENST00000359895 SIRPB2Q5JXA9 342 aa18.47■□□□□ 0.55
PDLIM7-203ENST00000359895 SPOUT1Q5T280 376 aaKnown RBP18.47■□□□□ 0.55
PDLIM7-203ENST00000359895 ALG1LQ6GMV1 187 aa18.47■□□□□ 0.55
PDLIM7-203ENST00000359895 ALYREFQ86V81 257 aaKnown RBP18.47■□□□□ 0.55
PDLIM7-203ENST00000359895 LONP2Q86WA8 852 aa18.47■□□□□ 0.55
PDLIM7-203ENST00000359895 UTP4Q969X6 686 aaKnown RBP18.47■□□□□ 0.55
PDLIM7-203ENST00000359895 MYEOVQ96EZ4 313 aa18.47■□□□□ 0.55
PDLIM7-203ENST00000359895 IFT43Q96FT9 208 aa18.47■□□□□ 0.55
PDLIM7-203ENST00000359895 SEMA3CQ99985 751 aa18.47■□□□□ 0.55
PDLIM7-203ENST00000359895 BTBD10Q9BSF8 475 aa18.47■□□□□ 0.55
PDLIM7-203ENST00000359895 ACE2Q9BYF1 805 aaPredicted RBP18.47■□□□□ 0.55
PDLIM7-203ENST00000359895 NMUR2Q9GZQ4 415 aa18.47■□□□□ 0.55
PDLIM7-203ENST00000359895 PLXNA4Q9HCM2 1894 aa18.46■□□□□ 0.55
PDLIM7-203ENST00000359895 COCHO43405 550 aa18.46■□□□□ 0.55
PDLIM7-203ENST00000359895 GJB5O95377 273 aa18.46■□□□□ 0.55
PDLIM7-203ENST00000359895 SEC24AO95486 1093 aa18.46■□□□□ 0.55
PDLIM7-203ENST00000359895 HSPA4LO95757 839 aa18.46■□□□□ 0.55
PDLIM7-203ENST00000359895 SAT1P21673 171 aa18.46■□□□□ 0.55
PDLIM7-203ENST00000359895 CLCN5P51795 746 aa18.46■□□□□ 0.55
PDLIM7-203ENST00000359895 SLC12A2P55011 1212 aa18.46■□□□□ 0.55
PDLIM7-203ENST00000359895 CHST9Q7L1S5 443 aa18.46■□□□□ 0.55
PDLIM7-203ENST00000359895 TMEM169Q96HH4 297 aa18.46■□□□□ 0.55
PDLIM7-203ENST00000359895 ELMO2Q96JJ3 720 aa18.46■□□□□ 0.55
PDLIM7-203ENST00000359895 OXSMQ9NWU1 459 aa18.46■□□□□ 0.55
PDLIM7-203ENST00000359895 SEPT3Q9UH03 358 aa18.46■□□□□ 0.55
PDLIM7-203ENST00000359895 RUVBL2Q9Y230 463 aaKnown RBP18.46■□□□□ 0.55
PDLIM7-203ENST00000359895 ZFP37Q9Y6Q3 630 aaPredicted RBP18.46■□□□□ 0.55
PDLIM7-203ENST00000359895 CCDC85CA6NKD9 419 aa18.45■□□□□ 0.54
PDLIM7-203ENST00000359895 CAPN14A8MX76 684 aa18.45■□□□□ 0.54
PDLIM7-203ENST00000359895 PHGDHO43175 533 aaKnown RBP18.45■□□□□ 0.54
PDLIM7-203ENST00000359895 SERPINF2P08697 491 aa18.45■□□□□ 0.54
PDLIM7-203ENST00000359895 ATXN1LP0C7T5 689 aaKnown RBP18.45■□□□□ 0.54
PDLIM7-203ENST00000359895 GMPRP36959 345 aa18.45■□□□□ 0.54
PDLIM7-203ENST00000359895 LEPRP48357 1165 aaKnown RBP18.45■□□□□ 0.54
PDLIM7-203ENST00000359895 HK2P52789 917 aa18.45■□□□□ 0.54
PDLIM7-203ENST00000359895 RFTN1Q14699 578 aaPredicted RBP18.45■□□□□ 0.54
PDLIM7-203ENST00000359895 RFWD3Q6PCD5 774 aa18.45■□□□□ 0.54
PDLIM7-203ENST00000359895 DENND1CQ8IV53 801 aa18.45■□□□□ 0.54
PDLIM7-203ENST00000359895 SLC39A11Q8N1S5 342 aa18.45■□□□□ 0.54
PDLIM7-203ENST00000359895 CFAP52Q8N1V2 620 aa18.45■□□□□ 0.54
PDLIM7-203ENST00000359895 STYXQ8WUJ0 223 aa18.45■□□□□ 0.54
PDLIM7-203ENST00000359895 TSPAN17Q96FV3 270 aa18.45■□□□□ 0.54
PDLIM7-203ENST00000359895 SCYL1Q96KG9 808 aa18.45■□□□□ 0.54
PDLIM7-203ENST00000359895 MFSD1Q9H3U5 465 aa18.45■□□□□ 0.54
PDLIM7-203ENST00000359895 CYP4F11Q9HBI6 524 aa18.45■□□□□ 0.54
PDLIM7-203ENST00000359895 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.45■□□□□ 0.547e-8■■■■■ 55
PDLIM7-203ENST00000359895 TBX21Q9UL17 535 aa18.45■□□□□ 0.54
PDLIM7-203ENST00000359895 RIMKLBQ9ULI2 386 aa18.45■□□□□ 0.54
PDLIM7-203ENST00000359895 APOBEC2Q9Y235 224 aaKnown RBP18.45■□□□□ 0.54
PDLIM7-203ENST00000359895 YIPF1Q9Y548 306 aa18.45■□□□□ 0.54
PDLIM7-203ENST00000359895 ABHD14A-ACY1A0A1B0GW23 586 aa18.44■□□□□ 0.54
PDLIM7-203ENST00000359895 ILVBLA1L0T0 632 aa18.44■□□□□ 0.54
PDLIM7-203ENST00000359895 KDELR3O43731 214 aa18.44■□□□□ 0.54
PDLIM7-203ENST00000359895 STC2O76061 302 aa18.44■□□□□ 0.54
PDLIM7-203ENST00000359895 KLHL2O95198 593 aa18.44■□□□□ 0.54
PDLIM7-203ENST00000359895 CCND1P24385 295 aa18.44■□□□□ 0.54
PDLIM7-203ENST00000359895 HOXD9P28356 352 aaPredicted RBP18.44■□□□□ 0.54
PDLIM7-203ENST00000359895 OXCT1P55809 520 aa18.44■□□□□ 0.54
PDLIM7-203ENST00000359895 LIPMQ5VYY2 423 aa18.44■□□□□ 0.54
PDLIM7-203ENST00000359895 IL31Q6EBC2 164 aa18.44■□□□□ 0.54
PDLIM7-203ENST00000359895 LRRC8EQ6NSJ5 796 aa18.44■□□□□ 0.54
PDLIM7-203ENST00000359895 SETD3Q86TU7 594 aaPredicted RBP18.44■□□□□ 0.54
PDLIM7-203ENST00000359895 TTC7BQ86TV6 843 aa18.44■□□□□ 0.54
PDLIM7-203ENST00000359895 KCTD4Q8WVF5 259 aa18.44■□□□□ 0.54
PDLIM7-203ENST00000359895 TOP1MTQ969P6 601 aa18.44■□□□□ 0.54
PDLIM7-203ENST00000359895 PRR11Q96HE9 360 aaPredicted RBP18.44■□□□□ 0.54
PDLIM7-203ENST00000359895 MGME1Q9BQP7 344 aa18.44■□□□□ 0.54
PDLIM7-203ENST00000359895 MAFFQ9ULX9 164 aa18.44■□□□□ 0.54
PDLIM7-203ENST00000359895 OBSL1O75147 1896 aa18.44■□□□□ 0.54
PDLIM7-203ENST00000359895 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.43■□□□□ 0.54
PDLIM7-203ENST00000359895 H3BNC9 293 aa18.43■□□□□ 0.54
PDLIM7-203ENST00000359895 GYG2O15488 501 aa18.43■□□□□ 0.54
PDLIM7-203ENST00000359895 LAG3P18627 525 aa18.43■□□□□ 0.54
PDLIM7-203ENST00000359895 CES1P23141 567 aa18.43■□□□□ 0.54
PDLIM7-203ENST00000359895 CORO1AP31146 461 aaKnown RBP18.43■□□□□ 0.54
PDLIM7-203ENST00000359895 AVPR1AP37288 418 aa18.43■□□□□ 0.54
PDLIM7-203ENST00000359895 PRAMEP78395 509 aa18.43■□□□□ 0.54
PDLIM7-203ENST00000359895 ZNF177Q13360 481 aaPredicted RBP18.43■□□□□ 0.54
PDLIM7-203ENST00000359895 RAB33AQ14088 237 aa18.43■□□□□ 0.54
PDLIM7-203ENST00000359895 IHHQ14623 411 aa18.43■□□□□ 0.54
PDLIM7-203ENST00000359895 WASHC2DQ5SRD0 308 aa18.43■□□□□ 0.54
PDLIM7-203ENST00000359895 CENPLQ8N0S6 344 aaPredicted RBP18.43■□□□□ 0.54
PDLIM7-203ENST00000359895 GPATCH11Q8N954 259 aa18.43■□□□□ 0.54
PDLIM7-203ENST00000359895 OR13J1Q8NGT2 312 aa18.43■□□□□ 0.54
PDLIM7-203ENST00000359895 ZNF689Q96CS4 500 aaPredicted RBP18.43■□□□□ 0.54
PDLIM7-203ENST00000359895 CCDC106Q9BWC9 280 aa18.43■□□□□ 0.54
PDLIM7-203ENST00000359895 KLF16Q9BXK1 252 aaPredicted RBP18.43■□□□□ 0.54
PDLIM7-203ENST00000359895 CRISPLD2Q9H0B8 497 aa18.43■□□□□ 0.54
PDLIM7-203ENST00000359895 PNPOQ9NVS9 261 aa18.43■□□□□ 0.54
PDLIM7-203ENST00000359895 UBA2Q9UBT2 640 aaPredicted RBP18.43■□□□□ 0.54
PDLIM7-203ENST00000359895 TAGLN3Q9UI15 199 aa18.43■□□□□ 0.54
PDLIM7-203ENST00000359895 A0A1B0GVM2 712 aa18.42■□□□□ 0.54
PDLIM7-203ENST00000359895 TCAF2A6NFQ2 919 aa18.42■□□□□ 0.54
PDLIM7-203ENST00000359895 SNUPNO95149 360 aaKnown RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms