RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 INTS11Q5TA45 600 aaKnown RBP11.59□□□□□ -0.55
SPTBN1-202ENST00000356805 PLEKHH3Q7Z736 793 aa11.59□□□□□ -0.55
SPTBN1-202ENST00000356805 ZNF248Q8NDW4 579 aa11.59□□□□□ -0.55
SPTBN1-202ENST00000356805 CXorf40AQ8TE69 158 aa11.59□□□□□ -0.55
SPTBN1-202ENST00000356805 ELMO3Q96BJ8 720 aa11.59□□□□□ -0.55
SPTBN1-202ENST00000356805 CHCHD6Q9BRQ6 235 aa11.59□□□□□ -0.55
SPTBN1-202ENST00000356805 PDGFDQ9GZP0 370 aaPredicted RBP11.59□□□□□ -0.55
SPTBN1-202ENST00000356805 TRAFD1O14545 582 aaPredicted RBP11.59□□□□□ -0.55
SPTBN1-202ENST00000356805 CAPN15O75808 1086 aa11.59□□□□□ -0.55
SPTBN1-202ENST00000356805 LYNP07948 512 aa11.59□□□□□ -0.55
SPTBN1-202ENST00000356805 ELK3P41970 407 aa11.59□□□□□ -0.55
SPTBN1-202ENST00000356805 FAM187BQ17R55 369 aa11.59□□□□□ -0.55
SPTBN1-202ENST00000356805 ADGRG2Q8IZP9 1017 aa11.59□□□□□ -0.55
SPTBN1-202ENST00000356805 MAGEE2Q8TD90 523 aaPredicted RBP11.59□□□□□ -0.55
SPTBN1-202ENST00000356805 EHD1Q9H4M9 534 aa11.59□□□□□ -0.55
SPTBN1-202ENST00000356805 DHX33Q9H6R0 707 aaKnown RBP11.59□□□□□ -0.55
SPTBN1-202ENST00000356805 ASTN2O75129 1339 aaPredicted RBP11.59□□□□□ -0.55
SPTBN1-202ENST00000356805 A0A087X1B8 175 aa11.59□□□□□ -0.55
SPTBN1-202ENST00000356805 CLDN25C9JDP6 229 aa11.59□□□□□ -0.55
SPTBN1-202ENST00000356805 CHADO15335 359 aa11.59□□□□□ -0.55
SPTBN1-202ENST00000356805 CDH17Q12864 832 aa11.59□□□□□ -0.55
SPTBN1-202ENST00000356805 SUZ12Q15022 739 aaKnown RBP11.59□□□□□ -0.55
SPTBN1-202ENST00000356805 CYP2A13Q16696 494 aa11.59□□□□□ -0.55
SPTBN1-202ENST00000356805 OVOS1Q6IE37 1185 aa11.59□□□□□ -0.55
SPTBN1-202ENST00000356805 KBTBD7Q8WVZ9 684 aa11.59□□□□□ -0.55
SPTBN1-202ENST00000356805 C1QTNF1Q9BXJ1 281 aa11.59□□□□□ -0.55
SPTBN1-202ENST00000356805 ITGA11Q9UKX5 1188 aa11.59□□□□□ -0.55
SPTBN1-202ENST00000356805 MTF2Q9Y483 593 aaPredicted RBP11.59□□□□□ -0.55
SPTBN1-202ENST00000356805 KDM6BO15054 1643 aa11.59□□□□□ -0.55
SPTBN1-202ENST00000356805 RNASE12Q5GAN4 147 aaKnown RBP11.59□□□□□ -0.55
SPTBN1-202ENST00000356805 PERM1Q5SV97 790 aa11.59□□□□□ -0.55
SPTBN1-202ENST00000356805 RAD51AP1Q96B01 352 aa11.59□□□□□ -0.55
SPTBN1-202ENST00000356805 RTKNQ9BST9 563 aa11.59□□□□□ -0.55
SPTBN1-202ENST00000356805 COX4I1P13073 169 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 MYL9P24844 172 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 PFKFB4Q16877 469 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 ZDHHC17Q8IUH5 632 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 TBC1D21Q8IYX1 336 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 PCSK9Q8NBP7 692 aaKnown RBP11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 LRRN4CLQ8ND94 238 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 GMCL1Q96IK5 515 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 PANX3Q96QZ0 392 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 VAT1Q99536 393 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 TRNAU1APQ9NX07 287 aaKnown RBP11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 TRHDEQ9UKU6 1024 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 SGTAO43765 313 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 TMCC2O75069 709 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 LAMTOR4Q0VGL1 99 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 LRRC38Q5VT99 294 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 SCUBE3Q8IX30 993 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 SMARCD1Q96GM5 515 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 SEMA4BQ9NPR2 832 aaPredicted RBP11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 IKZF3Q9UKT9 509 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 ZNF879B4DU55 563 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 ICAM1P05362 532 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 CXCL8P10145 99 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 POTEHQ6S545 545 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 SAMD3Q8N6K7 520 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 A0A0X1KG70 313 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 UBE2Q2LH0YL09 131 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 CSF1RP07333 972 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 CCNYL3P0C7X3 344 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 LSM3P62310 102 aaKnown RBP11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 BNIP1Q12981 228 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 KIAA1324Q6UXG2 1013 aaKnown RBP11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 PIWIL4Q7Z3Z4 852 aaKnown RBP11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 HIPK1Q86Z02 1210 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 EFCAB3Q8N7B9 438 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 DNAJB3Q8WWF6 145 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 TBCCD1Q9NVR7 557 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 PLK2Q9NYY3 685 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 BBIP1A8MTZ0 92 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 OPLAHO14841 1288 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 ITGA2P17301 1181 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 RPL22P35268 128 aaKnown RBP11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 HNF4AP41235 474 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 PTPN5P54829 565 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 GCNT1Q02742 428 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 OR2L5Q8NG80 312 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 MCFD2Q8NI22 146 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 GAL3ST3Q96A11 431 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 C18orf25Q96B23 403 aaPredicted RBP11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 VPS35Q96QK1 796 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 LRRC19Q9H756 370 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 ZNF180Q9UJW8 692 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 PCDHB5Q9Y5E4 795 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 TM7SF2O76062 418 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 TAS2R41P59536 307 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 TMCO6Q96DC7 493 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 PPP1R16AQ96I34 528 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 GPER1Q99527 375 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 KLQ9UEF7 1012 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 TELO2Q9Y4R8 837 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 XYLBO75191 536 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 SNRPB2P08579 225 aaKnown RBP11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 BUD31P41223 144 aaPredicted RBP11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 BTG3Q14201 252 aaPredicted RBP11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 RNF19BQ6ZMZ0 732 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 ZCCHC23Q6ZST2 131 aa11.58□□□□□ -0.56
SPTBN1-202ENST00000356805 FAM126AQ9BYI3 521 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms