RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 ACE2Q9BYF1 805 aaPredicted RBP14.04□□□□□ -0.16
TRIM4-201ENST00000349062 MARCH5Q9NX47 278 aa14.04□□□□□ -0.16
TRIM4-201ENST00000349062 CCDC22O60826 627 aa14.03□□□□□ -0.16
TRIM4-201ENST00000349062 ALDH1A2O94788 518 aa14.03□□□□□ -0.16
TRIM4-201ENST00000349062 OAZ2O95190 189 aa14.03□□□□□ -0.16
TRIM4-201ENST00000349062 ACRP10323 421 aa14.03□□□□□ -0.16
TRIM4-201ENST00000349062 HCAR3P49019 387 aa14.03□□□□□ -0.16
TRIM4-201ENST00000349062 ARSDP51689 593 aa14.03□□□□□ -0.16
TRIM4-201ENST00000349062 BFSP2Q13515 415 aa14.03□□□□□ -0.16
TRIM4-201ENST00000349062 CWF19L1Q69YN2 538 aaKnown RBP14.03□□□□□ -0.16
TRIM4-201ENST00000349062 TRAF7Q6Q0C0 670 aa14.03□□□□□ -0.16
TRIM4-201ENST00000349062 LINC00523Q86TU6 105 aa14.03□□□□□ -0.16
TRIM4-201ENST00000349062 MUC3BQ9H195 1237 aa14.03□□□□□ -0.16
TRIM4-201ENST00000349062 FAM96AQ9H5X1 160 aa14.03□□□□□ -0.16
TRIM4-201ENST00000349062 TAS2R1Q9NYW7 299 aa14.03□□□□□ -0.16
TRIM4-201ENST00000349062 SIRPGQ9P1W8 387 aa14.03□□□□□ -0.16
TRIM4-201ENST00000349062 CCDC160A6NGH7 325 aa14.03□□□□□ -0.16
TRIM4-201ENST00000349062 F5H5T6 163 aa14.03□□□□□ -0.16
TRIM4-201ENST00000349062 SORBS2O94875 1100 aaKnown RBP14.03□□□□□ -0.16
TRIM4-201ENST00000349062 GSTA2P09210 222 aa14.03□□□□□ -0.16
TRIM4-201ENST00000349062 SKIV2L2P42285 1042 aaKnown RBP14.03□□□□□ -0.16
TRIM4-201ENST00000349062 TLE2Q04725 743 aa14.03□□□□□ -0.16
TRIM4-201ENST00000349062 LAMB3Q13751 1172 aa14.03□□□□□ -0.16
TRIM4-201ENST00000349062 TMEM198Q66K66 360 aa14.03□□□□□ -0.16
TRIM4-201ENST00000349062 LRRC74BQ6ZQY2 392 aa14.03□□□□□ -0.16
TRIM4-201ENST00000349062 OR52K2Q8NGK3 314 aa14.03□□□□□ -0.16
TRIM4-201ENST00000349062 OR13C4Q8NGS5 318 aa14.03□□□□□ -0.16
TRIM4-201ENST00000349062 ERLEC1Q96DZ1 483 aa14.03□□□□□ -0.16
TRIM4-201ENST00000349062 CASD1Q96PB1 797 aa14.03□□□□□ -0.16
TRIM4-201ENST00000349062 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.03□□□□□ -0.16
TRIM4-201ENST00000349062 FBXO5Q9UKT4 447 aa14.03□□□□□ -0.16
TRIM4-201ENST00000349062 SCML2Q9UQR0 700 aa14.03□□□□□ -0.16
TRIM4-201ENST00000349062 TLR6Q9Y2C9 796 aa14.03□□□□□ -0.16
TRIM4-201ENST00000349062 PCDHGC4Q9Y5F7 938 aa14.03□□□□□ -0.16
TRIM4-201ENST00000349062 ZFP37Q9Y6Q3 630 aaPredicted RBP14.03□□□□□ -0.16
TRIM4-201ENST00000349062 FGF10O15520 208 aaPredicted RBP14.03□□□□□ -0.16
TRIM4-201ENST00000349062 PIGNO95427 931 aa14.03□□□□□ -0.16
TRIM4-201ENST00000349062 SERPINE1P05121 402 aa14.03□□□□□ -0.16
TRIM4-201ENST00000349062 FESP07332 822 aa14.03□□□□□ -0.16
TRIM4-201ENST00000349062 STMN1P16949 149 aa14.03□□□□□ -0.16
TRIM4-201ENST00000349062 RENBPP51606 427 aa14.03□□□□□ -0.16
TRIM4-201ENST00000349062 KYAT3Q6YP21 454 aaKnown RBP14.03□□□□□ -0.16
TRIM4-201ENST00000349062 VAT1Q99536 393 aa14.03□□□□□ -0.16
TRIM4-201ENST00000349062 TRIM62Q9BVG3 475 aa14.03□□□□□ -0.16
TRIM4-201ENST00000349062 GATA5Q9BWX5 397 aaPredicted RBP14.03□□□□□ -0.16
TRIM4-201ENST00000349062 ACOT9Q9Y305 439 aa14.03□□□□□ -0.16
TRIM4-201ENST00000349062 C2orf78A6NCI8 922 aa14.02□□□□□ -0.16
TRIM4-201ENST00000349062 PMLP29590 882 aa14.02□□□□□ -0.16
TRIM4-201ENST00000349062 GRIA4P48058 902 aa14.02□□□□□ -0.16
TRIM4-201ENST00000349062 ABCE1P61221 599 aaKnown RBP14.02□□□□□ -0.16
TRIM4-201ENST00000349062 GPNMBQ14956 572 aa14.02□□□□□ -0.16
TRIM4-201ENST00000349062 ANO4Q32M45 955 aa14.02□□□□□ -0.16
TRIM4-201ENST00000349062 ZC3HC1Q86WB0 502 aaKnown RBP14.02□□□□□ -0.16
TRIM4-201ENST00000349062 FSTL5Q8N475 847 aaPredicted RBP14.02□□□□□ -0.16
TRIM4-201ENST00000349062 TDRD5Q8NAT2 981 aaKnown RBP14.02□□□□□ -0.16
TRIM4-201ENST00000349062 RBM15BQ8NDT2 890 aaKnown RBP14.02□□□□□ -0.16
TRIM4-201ENST00000349062 INPP5DQ92835 1189 aa14.02□□□□□ -0.16
TRIM4-201ENST00000349062 TM6SF2Q9BZW4 377 aa14.02□□□□□ -0.16
TRIM4-201ENST00000349062 PLA2G4CQ9UP65 541 aa14.02□□□□□ -0.16
TRIM4-201ENST00000349062 FAM50BQ9Y247 325 aa14.02□□□□□ -0.16
TRIM4-201ENST00000349062 NCF1BA6NI72 391 aaPredicted RBP14.02□□□□□ -0.17
TRIM4-201ENST00000349062 NCF1CA8MVU1 366 aaPredicted RBP14.02□□□□□ -0.17
TRIM4-201ENST00000349062 SPECC1L-ADORA2AF8WAN1 911 aa14.02□□□□□ -0.17
TRIM4-201ENST00000349062 AIM2O14862 343 aa14.02□□□□□ -0.17
TRIM4-201ENST00000349062 MUSKO15146 869 aa14.02□□□□□ -0.17
TRIM4-201ENST00000349062 TIMM44O43615 452 aa14.02□□□□□ -0.17
TRIM4-201ENST00000349062 NCF1P14598 390 aaPredicted RBP14.02□□□□□ -0.17
TRIM4-201ENST00000349062 ATF6P18850 670 aa14.02□□□□□ -0.17
TRIM4-201ENST00000349062 HDCP19113 662 aa14.02□□□□□ -0.17
TRIM4-201ENST00000349062 CCNFP41002 786 aa14.02□□□□□ -0.17
TRIM4-201ENST00000349062 CUL3Q13618 768 aa14.02□□□□□ -0.17
TRIM4-201ENST00000349062 IHHQ14623 411 aa14.02□□□□□ -0.17
TRIM4-201ENST00000349062 C11orf91Q3C1V1 193 aa14.02□□□□□ -0.17
TRIM4-201ENST00000349062 SLC9B1Q4ZJI4 515 aa14.02□□□□□ -0.17
TRIM4-201ENST00000349062 RALGPS1Q5JS13 557 aa14.02□□□□□ -0.17
TRIM4-201ENST00000349062 PDPK2PQ6A1A2 396 aa14.02□□□□□ -0.17
TRIM4-201ENST00000349062 CARNMT1Q8N4J0 409 aa14.02□□□□□ -0.17
TRIM4-201ENST00000349062 SH3RF2Q8TEC5 729 aa14.02□□□□□ -0.17
TRIM4-201ENST00000349062 NRG4Q8WWG1 115 aa14.02□□□□□ -0.17
TRIM4-201ENST00000349062 WBP2Q969T9 261 aa14.02□□□□□ -0.17
TRIM4-201ENST00000349062 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.02□□□□□ -0.17
TRIM4-201ENST00000349062 SLC38A8A6NNN8 435 aa14.02□□□□□ -0.17
TRIM4-201ENST00000349062 ZBBXA8MT70 800 aa14.02□□□□□ -0.17
TRIM4-201ENST00000349062 GSC2O15499 205 aa14.02□□□□□ -0.17
TRIM4-201ENST00000349062 GPR39O43194 453 aa14.02□□□□□ -0.17
TRIM4-201ENST00000349062 CNTFP26441 200 aa14.02□□□□□ -0.17
TRIM4-201ENST00000349062 SOX11P35716 441 aa14.02□□□□□ -0.17
TRIM4-201ENST00000349062 HARS2P49590 506 aaKnown RBP14.02□□□□□ -0.17
TRIM4-201ENST00000349062 SERPINH1P50454 418 aaKnown RBP14.02□□□□□ -0.17
TRIM4-201ENST00000349062 SGSHP51688 502 aa14.02□□□□□ -0.17
TRIM4-201ENST00000349062 NME5P56597 212 aa14.02□□□□□ -0.17
TRIM4-201ENST00000349062 ROR2Q01974 943 aaKnown RBP14.02□□□□□ -0.17
TRIM4-201ENST00000349062 TWF1Q12792 350 aa14.02□□□□□ -0.17
TRIM4-201ENST00000349062 WASHC2DQ5SRD0 308 aa14.02□□□□□ -0.17
TRIM4-201ENST00000349062 PHTF2Q8N3S3 785 aa14.02□□□□□ -0.17
TRIM4-201ENST00000349062 ZNF333Q96JL9 665 aa14.02□□□□□ -0.17
TRIM4-201ENST00000349062 BTN2A3PQ96KV6 586 aa14.02□□□□□ -0.17
TRIM4-201ENST00000349062 BTBD10Q9BSF8 475 aa14.02□□□□□ -0.17
TRIM4-201ENST00000349062 COG4Q9H9E3 785 aa14.02□□□□□ -0.17
TRIM4-201ENST00000349062 PRM3Q9NNZ6 103 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms