RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 GATAD2BQ8WXI9 593 aa12.93□□□□□ -0.34
USP47-202ENST00000339865 ATG10Q9H0Y0 220 aa12.93□□□□□ -0.34
USP47-202ENST00000339865 ZNF335Q9H4Z2 1342 aaPredicted RBP12.93□□□□□ -0.34
USP47-202ENST00000339865 DHRS12A0PJE2 317 aa12.93□□□□□ -0.34
USP47-202ENST00000339865 I3L521 148 aa12.93□□□□□ -0.34
USP47-202ENST00000339865 ITGB1P05556 798 aa12.93□□□□□ -0.34
USP47-202ENST00000339865 KLHDC7AQ5VTJ3 777 aa12.93□□□□□ -0.34
USP47-202ENST00000339865 TBC1D13Q9NVG8 400 aa12.93□□□□□ -0.34
USP47-202ENST00000339865 UPB1Q9UBR1 384 aa12.93□□□□□ -0.34
USP47-202ENST00000339865 ANKRD6Q9Y2G4 727 aa12.93□□□□□ -0.34
USP47-202ENST00000339865 A0A088AWK7 358 aa12.93□□□□□ -0.34
USP47-202ENST00000339865 ZNF10P21506 573 aaPredicted RBP12.93□□□□□ -0.34
USP47-202ENST00000339865 RHOAP61586 193 aa12.93□□□□□ -0.34
USP47-202ENST00000339865 SGCGQ13326 291 aa12.93□□□□□ -0.34
USP47-202ENST00000339865 ZNF470Q6ECI4 717 aa12.93□□□□□ -0.34
USP47-202ENST00000339865 APTXQ7Z2E3 356 aaKnown RBP12.93□□□□□ -0.34
USP47-202ENST00000339865 CLIP4Q8N3C7 705 aa12.93□□□□□ -0.34
USP47-202ENST00000339865 ATP6V1C2Q8NEY4 427 aa12.93□□□□□ -0.34
USP47-202ENST00000339865 SGCDQ92629 289 aa12.93□□□□□ -0.34
USP47-202ENST00000339865 SLC47A1Q96FL8 570 aa12.93□□□□□ -0.34
USP47-202ENST00000339865 OR10H1Q9Y4A9 318 aa12.93□□□□□ -0.34
USP47-202ENST00000339865 FMO4P31512 558 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 PHC1P78364 1004 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 MXD1Q05195 221 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 SCN1BQ07699 218 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 FAAH2Q6GMR7 532 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 EZH1Q92800 747 aaPredicted RBP12.92□□□□□ -0.34
USP47-202ENST00000339865 ACE2Q9BYF1 805 aaPredicted RBP12.92□□□□□ -0.34
USP47-202ENST00000339865 MTMR12Q9C0I1 747 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 LOC100509620A0A075B734 347 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 CYP2F1P24903 491 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 PIK3CGP48736 1102 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 SMIM11AP58511 58 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 IFI35P80217 286 aaPredicted RBP12.92□□□□□ -0.34
USP47-202ENST00000339865 PCDH1Q08174 1060 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 EZH2Q15910 746 aaKnown RBP12.92□□□□□ -0.34
USP47-202ENST00000339865 ZBTB6Q15916 424 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 PREPLQ4J6C6 727 aaPredicted RBP12.92□□□□□ -0.34
USP47-202ENST00000339865 DET1Q7L5Y6 550 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 FAM131BQ86XD5 332 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 GPALPP1Q8IXQ4 340 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 TBC1D10AQ9BXI6 508 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 TMEM39AQ9NV64 488 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 CCDC163A0A0D9SF12 145 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 PPEF2O14830 753 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 RHOCP08134 193 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 ELK3P41970 407 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 ENPEPQ07075 957 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 EFEMP1Q12805 493 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 UBAP2LQ14157 1087 aaKnown RBP12.92□□□□□ -0.34
USP47-202ENST00000339865 SPANXN3Q5MJ09 141 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 GPATCH1Q9BRR8 931 aaKnown RBP12.92□□□□□ -0.34
USP47-202ENST00000339865 AP3M1Q9Y2T2 418 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 CPSF4LA6NMK7 179 aaKnown RBP12.92□□□□□ -0.34
USP47-202ENST00000339865 NOTOA8MTQ0 251 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 OR56A5P0C7T3 313 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 NR4A1P22736 598 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 ATXN1P54253 815 aaKnown RBP12.92□□□□□ -0.34
USP47-202ENST00000339865 ITGA7Q13683 1181 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 XKR3Q5GH77 459 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 PRAMEF17Q5VTA0 474 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 C16orf46Q6P387 395 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 GALNT18Q6P9A2 607 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 NRSN1Q8IZ57 195 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 SYT15Q9BQS2 421 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 ATXN3LQ9H3M9 355 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 PADI2Q9Y2J8 665 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 FAM86B1E9PN63 330 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 MUTP22033 750 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 PON1P27169 355 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 CLK3P49761 638 aaKnown RBP12.92□□□□□ -0.34
USP47-202ENST00000339865 ORAI2Q96SN7 254 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 CBWD1Q9BRT8 395 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 ZNF225Q9UK10 706 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 IKZF2Q9UKS7 526 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 CORO1CQ9ULV4 474 aaPredicted RBP12.92□□□□□ -0.34
USP47-202ENST00000339865 NCKAP1Q9Y2A7 1128 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 DNAJC13O75165 2243 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 OGTO15294 1046 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 RHOBTB3O94955 611 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 CAMTA2O94983 1202 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 CSN2P05814 226 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 MMP10P09238 476 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 MSX2P35548 267 aaPredicted RBP12.92□□□□□ -0.34
USP47-202ENST00000339865 ACSM2AQ08AH3 577 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 HSDL1Q3SXM5 330 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 TTMPQ5BVD1 217 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 ACSM2BQ68CK6 577 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 ZNF649Q9BS31 505 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 SEMA4BQ9NPR2 832 aaPredicted RBP12.92□□□□□ -0.34
USP47-202ENST00000339865 AASSQ9UDR5 926 aa12.92□□□□□ -0.34
USP47-202ENST00000339865 H3BQF6 201 aa12.91□□□□□ -0.34
USP47-202ENST00000339865 AKAP8O43823 692 aaKnown RBP12.91□□□□□ -0.34
USP47-202ENST00000339865 ENTPD5O75356 428 aa12.91□□□□□ -0.34
USP47-202ENST00000339865 KLRC2P26717 231 aa12.91□□□□□ -0.34
USP47-202ENST00000339865 MTX3Q5HYI7 312 aa12.91□□□□□ -0.34
USP47-202ENST00000339865 OR2L8Q8NGY9 312 aa12.91□□□□□ -0.34
USP47-202ENST00000339865 GAL3ST1Q99999 423 aa12.91□□□□□ -0.34
USP47-202ENST00000339865 ARPC4-TTLL3A0A0A6YYG9 625 aa12.91□□□□□ -0.34
USP47-202ENST00000339865 GLI1P08151 1106 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms