RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

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Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 CBX4O00257 560 aa16.4■□□□□ 0.22
HPS1-202ENST00000338546 TGDSO95455 350 aa16.4■□□□□ 0.22
HPS1-202ENST00000338546 MYL4P12829 197 aa16.4■□□□□ 0.22
HPS1-202ENST00000338546 ARNTP27540 789 aa16.4■□□□□ 0.22
HPS1-202ENST00000338546 CSRP3P50461 194 aa16.4■□□□□ 0.22
HPS1-202ENST00000338546 ARF5P84085 180 aa16.4■□□□□ 0.22
HPS1-202ENST00000338546 ACVR1Q04771 509 aa16.4■□□□□ 0.22
HPS1-202ENST00000338546 SLC12A1Q13621 1099 aa16.4■□□□□ 0.22
HPS1-202ENST00000338546 CDH18Q13634 790 aa16.4■□□□□ 0.22
HPS1-202ENST00000338546 CCDC153Q494R4 210 aa16.4■□□□□ 0.22
HPS1-202ENST00000338546 ARHGAP15Q53QZ3 475 aa16.4■□□□□ 0.22
HPS1-202ENST00000338546 ATG16L1Q676U5 607 aa16.4■□□□□ 0.22
HPS1-202ENST00000338546 NEPROQ6NW34 567 aa16.4■□□□□ 0.22
HPS1-202ENST00000338546 ELMSAN1Q6PJG2 1045 aa16.4■□□□□ 0.22
HPS1-202ENST00000338546 ZC3HC1Q86WB0 502 aaKnown RBP16.4■□□□□ 0.22
HPS1-202ENST00000338546 TDRD5Q8NAT2 981 aaKnown RBP16.4■□□□□ 0.22
HPS1-202ENST00000338546 C2CD4AQ8NCU7 369 aaPredicted RBP16.4■□□□□ 0.22
HPS1-202ENST00000338546 SCG3Q8WXD2 468 aaKnown RBP16.4■□□□□ 0.22
HPS1-202ENST00000338546 ALG14Q96F25 216 aa16.4■□□□□ 0.22
HPS1-202ENST00000338546 C2orf49Q9BVC5 232 aaPredicted RBP16.4■□□□□ 0.22
HPS1-202ENST00000338546 SLC46A2Q9BY10 475 aa16.4■□□□□ 0.22
HPS1-202ENST00000338546 KDM4CQ9H3R0 1056 aa16.4■□□□□ 0.22
HPS1-202ENST00000338546 SCUBE2Q9NQ36 999 aa16.4■□□□□ 0.22
HPS1-202ENST00000338546 SNX15Q9NRS6 342 aa16.4■□□□□ 0.22
HPS1-202ENST00000338546 IL1RAPL1Q9NZN1 696 aa16.4■□□□□ 0.22
HPS1-202ENST00000338546 SIRPGQ9P1W8 387 aa16.4■□□□□ 0.22
HPS1-202ENST00000338546 LEFTY2O00292 366 aa16.39■□□□□ 0.21
HPS1-202ENST00000338546 CCL16O15467 120 aa16.39■□□□□ 0.21
HPS1-202ENST00000338546 XYLBO75191 536 aa16.39■□□□□ 0.21
HPS1-202ENST00000338546 COL6A2P12110 1019 aa16.39■□□□□ 0.21
HPS1-202ENST00000338546 PSMA3P25788 255 aa16.39■□□□□ 0.21
HPS1-202ENST00000338546 PLK1P53350 603 aa16.39■□□□□ 0.21
HPS1-202ENST00000338546 IFT88Q13099 833 aa16.39■□□□□ 0.21
HPS1-202ENST00000338546 SEPT6Q14141 434 aa16.39■□□□□ 0.21
HPS1-202ENST00000338546 RETSATQ6NUM9 610 aa16.39■□□□□ 0.21
HPS1-202ENST00000338546 KDELC2Q7Z4H8 507 aa16.39■□□□□ 0.21
HPS1-202ENST00000338546 ZNF557Q8N988 423 aaPredicted RBP16.39■□□□□ 0.21
HPS1-202ENST00000338546 FIBINQ8TAL6 211 aa16.39■□□□□ 0.21
HPS1-202ENST00000338546 MICAL1Q8TDZ2 1067 aa16.39■□□□□ 0.21
HPS1-202ENST00000338546 SLC22A17Q8WUG5 538 aa16.39■□□□□ 0.21
HPS1-202ENST00000338546 USP13Q92995 863 aaPredicted RBP16.39■□□□□ 0.21
HPS1-202ENST00000338546 MFSD1Q9H3U5 465 aa16.39■□□□□ 0.21
HPS1-202ENST00000338546 TASP1Q9H6P5 420 aa16.39■□□□□ 0.21
HPS1-202ENST00000338546 NOD2Q9HC29 1040 aa16.39■□□□□ 0.21
HPS1-202ENST00000338546 KIAA1522Q9P206 1035 aaPredicted RBP16.39■□□□□ 0.21
HPS1-202ENST00000338546 KLHL14Q9P2G3 628 aa16.39■□□□□ 0.21
HPS1-202ENST00000338546 CCT8L1PA6NM43 557 aa16.38■□□□□ 0.21
HPS1-202ENST00000338546 LDB2O43679 373 aa16.38■□□□□ 0.21
HPS1-202ENST00000338546 CYBBP04839 570 aa16.38■□□□□ 0.21
HPS1-202ENST00000338546 BPGMP07738 259 aa16.38■□□□□ 0.21
HPS1-202ENST00000338546 TCF3P15923 654 aa16.38■□□□□ 0.21
HPS1-202ENST00000338546 GLDCP23378 1020 aa16.38■□□□□ 0.21
HPS1-202ENST00000338546 SLC20A2Q08357 652 aa16.38■□□□□ 0.21
HPS1-202ENST00000338546 ZKSCAN8Q15776 578 aaPredicted RBP16.38■□□□□ 0.21
HPS1-202ENST00000338546 CCDC121Q6ZUS5 278 aa16.38■□□□□ 0.21
HPS1-202ENST00000338546 CLEC14AQ86T13 490 aa16.38■□□□□ 0.21
HPS1-202ENST00000338546 SRLQ86TD4 932 aa16.38■□□□□ 0.21
HPS1-202ENST00000338546 MFN1Q8IWA4 741 aa16.38■□□□□ 0.21
HPS1-202ENST00000338546 OTUD6BQ8N6M0 293 aa16.38■□□□□ 0.21
HPS1-202ENST00000338546 KIAA1958Q8N8K9 716 aa16.38■□□□□ 0.21
HPS1-202ENST00000338546 ARMC2Q8NEN0 867 aa16.38■□□□□ 0.21
HPS1-202ENST00000338546 SHKBP1Q8TBC3 707 aa16.38■□□□□ 0.21
HPS1-202ENST00000338546 DDI1Q8WTU0 396 aa16.38■□□□□ 0.21
HPS1-202ENST00000338546 C17orf80Q9BSJ5 609 aa16.38■□□□□ 0.21
HPS1-202ENST00000338546 MAN1C1Q9NR34 630 aa16.38■□□□□ 0.21
HPS1-202ENST00000338546 ZDHHC7Q9NXF8 308 aa16.38■□□□□ 0.21
HPS1-202ENST00000338546 VPS28Q9UK41 221 aa16.38■□□□□ 0.21
HPS1-202ENST00000338546 MTO1Q9Y2Z2 717 aaKnown RBP16.38■□□□□ 0.21
HPS1-202ENST00000338546 PLIN3O60664 434 aa16.38■□□□□ 0.21
HPS1-202ENST00000338546 CLASP2O75122 1294 aaKnown RBP16.38■□□□□ 0.21
HPS1-202ENST00000338546 TMCC1O94876 653 aa16.38■□□□□ 0.21
HPS1-202ENST00000338546 CRTAMO95727 393 aa16.38■□□□□ 0.21
HPS1-202ENST00000338546 CD160O95971 181 aa16.38■□□□□ 0.21
HPS1-202ENST00000338546 AHSGP02765 367 aa16.38■□□□□ 0.21
HPS1-202ENST00000338546 APOA4P06727 396 aa16.38■□□□□ 0.21
HPS1-202ENST00000338546 NEFHP12036 1026 aa16.38■□□□□ 0.21
HPS1-202ENST00000338546 AVPR1AP37288 418 aa16.38■□□□□ 0.21
HPS1-202ENST00000338546 MAPK8P45983 427 aa16.38■□□□□ 0.21
HPS1-202ENST00000338546 LEPRP48357 1165 aaKnown RBP16.38■□□□□ 0.21
HPS1-202ENST00000338546 CD151P48509 253 aa16.38■□□□□ 0.21
HPS1-202ENST00000338546 CSNK1DP48730 415 aa16.38■□□□□ 0.21
HPS1-202ENST00000338546 SCNN1BP51168 640 aa16.38■□□□□ 0.21
HPS1-202ENST00000338546 FSCBQ5H9T9 825 aa16.38■□□□□ 0.21
HPS1-202ENST00000338546 GPR158Q5T848 1215 aa16.38■□□□□ 0.21
HPS1-202ENST00000338546 CGB2Q6NT52 195 aa16.38■□□□□ 0.21
HPS1-202ENST00000338546 FAM47EQ6ZV65 393 aa16.38■□□□□ 0.21
HPS1-202ENST00000338546 CCDC91Q7Z6B0 441 aa16.38■□□□□ 0.21
HPS1-202ENST00000338546 NUDCD3Q8IVD9 361 aa16.38■□□□□ 0.21
HPS1-202ENST00000338546 BBS7Q8IWZ6 715 aa16.38■□□□□ 0.21
HPS1-202ENST00000338546 CMTM8Q8IZV2 173 aa16.38■□□□□ 0.21
HPS1-202ENST00000338546 GBP7Q8N8V2 638 aaPredicted RBP16.38■□□□□ 0.21
HPS1-202ENST00000338546 OR13J1Q8NGT2 312 aa16.38■□□□□ 0.21
HPS1-202ENST00000338546 STYXQ8WUJ0 223 aa16.38■□□□□ 0.21
HPS1-202ENST00000338546 TDRD1Q9BXT4 1180 aaKnown RBP16.38■□□□□ 0.21
HPS1-202ENST00000338546 ADGRE3Q9BY15 652 aa16.38■□□□□ 0.21
HPS1-202ENST00000338546 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.38■□□□□ 0.21
HPS1-202ENST00000338546 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.38■□□□□ 0.21
HPS1-202ENST00000338546 SLC2A6Q9UGQ3 507 aa16.38■□□□□ 0.21
HPS1-202ENST00000338546 MID2Q9UJV3 735 aa16.38■□□□□ 0.21
HPS1-202ENST00000338546 FBXO5Q9UKT4 447 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms