RNA–Protein interactions for RNA: ENST00000328736.7

PTPN21-201, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-201ENST00000328736 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.55■□□□□ 0.08
PTPN21-201ENST00000328736 KHDRBS3O75525 346 aaKnown RBP15.54■□□□□ 0.08
PTPN21-201ENST00000328736 DDNO94850 711 aaPredicted RBP15.54■□□□□ 0.08
PTPN21-201ENST00000328736 RARAP10276 462 aa15.54■□□□□ 0.08
PTPN21-201ENST00000328736 OMPP47874 163 aa15.54■□□□□ 0.08
PTPN21-201ENST00000328736 AP5B1Q2VPB7 878 aa15.54■□□□□ 0.08
PTPN21-201ENST00000328736 TMC3Q7Z5M5 1100 aa15.54■□□□□ 0.08
PTPN21-201ENST00000328736 DUSP9Q99956 384 aaKnown RBP15.54■□□□□ 0.08
PTPN21-201ENST00000328736 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.54■□□□□ 0.08
PTPN21-201ENST00000328736 PSMB4P28070 264 aa15.54■□□□□ 0.08
PTPN21-201ENST00000328736 SCNN1GP51170 649 aa15.54■□□□□ 0.08
PTPN21-201ENST00000328736 NR1D2Q14995 579 aa15.54■□□□□ 0.08
PTPN21-201ENST00000328736 GRIK5Q16478 980 aa15.54■□□□□ 0.08
PTPN21-201ENST00000328736 XKR6Q5GH73 641 aa15.54■□□□□ 0.08
PTPN21-201ENST00000328736 MAP1SQ66K74 1059 aaPredicted RBP15.54■□□□□ 0.08
PTPN21-201ENST00000328736 CXXC5Q7LFL8 322 aaKnown RBP15.54■□□□□ 0.08
PTPN21-201ENST00000328736 CAMK1DQ8IU85 385 aa15.54■□□□□ 0.08
PTPN21-201ENST00000328736 DENND1CQ8IV53 801 aa15.54■□□□□ 0.08
PTPN21-201ENST00000328736 MORF4L1Q9UBU8 362 aa15.54■□□□□ 0.08
PTPN21-201ENST00000328736 TBC1D30Q9Y2I9 924 aa15.54■□□□□ 0.08
PTPN21-201ENST00000328736 GSAPA4D1B5 854 aa15.54■□□□□ 0.08
PTPN21-201ENST00000328736 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.54■□□□□ 0.08
PTPN21-201ENST00000328736 ADM5C9JUS6 153 aa15.54■□□□□ 0.08
PTPN21-201ENST00000328736 SLC35G4P0C7Q5 338 aa15.54■□□□□ 0.08
PTPN21-201ENST00000328736 FKBP1AP62942 108 aaKnown RBP15.54■□□□□ 0.08
PTPN21-201ENST00000328736 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.54■□□□□ 0.08
PTPN21-201ENST00000328736 CEP68Q76N32 757 aa15.54■□□□□ 0.08
PTPN21-201ENST00000328736 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.54■□□□□ 0.08
PTPN21-201ENST00000328736 KAT5Q92993 513 aa15.54■□□□□ 0.08
PTPN21-201ENST00000328736 SLC4A5Q9BY07 1137 aa15.54■□□□□ 0.08
PTPN21-201ENST00000328736 PRRG4Q9BZD6 226 aa15.54■□□□□ 0.08
PTPN21-201ENST00000328736 MAT2BQ9NZL9 334 aa15.54■□□□□ 0.08
PTPN21-201ENST00000328736 IKZF3Q9UKT9 509 aa15.54■□□□□ 0.08
PTPN21-201ENST00000328736 SORCS3Q9UPU3 1222 aa15.54■□□□□ 0.08
PTPN21-201ENST00000328736 CASP7P55210 303 aa15.54■□□□□ 0.08
PTPN21-201ENST00000328736 SRP54P61011 504 aaKnown RBP15.54■□□□□ 0.08
PTPN21-201ENST00000328736 EVX2Q03828 476 aa15.54■□□□□ 0.08
PTPN21-201ENST00000328736 NOMO2Q5JPE7 1267 aa15.54■□□□□ 0.08
PTPN21-201ENST00000328736 CELF3Q5SZQ8 465 aaKnown RBP15.54■□□□□ 0.08
PTPN21-201ENST00000328736 ESRP1Q6NXG1 681 aaKnown RBP15.54■□□□□ 0.08
PTPN21-201ENST00000328736 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.54■□□□□ 0.08
PTPN21-201ENST00000328736 HEXDCQ8WVB3 486 aa15.54■□□□□ 0.08
PTPN21-201ENST00000328736 DDX20Q9UHI6 824 aaKnown RBP15.54■□□□□ 0.08
PTPN21-201ENST00000328736 SIGLEC16A6NMB1 481 aa15.54■□□□□ 0.08
PTPN21-201ENST00000328736 ISM1B1AKI9 464 aa15.54■□□□□ 0.08
PTPN21-201ENST00000328736 CACNB4O00305 520 aaPredicted RBP15.54■□□□□ 0.08
PTPN21-201ENST00000328736 H2AFXP16104 143 aaPredicted RBP15.54■□□□□ 0.08
PTPN21-201ENST00000328736 EIF2B2P49770 351 aaKnown RBP15.54■□□□□ 0.08
PTPN21-201ENST00000328736 ACTR3P61158 418 aa15.54■□□□□ 0.08
PTPN21-201ENST00000328736 RASAL3Q86YV0 1011 aa15.54■□□□□ 0.08
PTPN21-201ENST00000328736 PTGR2Q8N8N7 351 aaPredicted RBP15.54■□□□□ 0.08
PTPN21-201ENST00000328736 RP9Q8TA86 221 aaKnown RBP15.54■□□□□ 0.08
PTPN21-201ENST00000328736 LRRN4Q8WUT4 740 aa15.54■□□□□ 0.08
PTPN21-201ENST00000328736 OR8D1Q8WZ84 308 aa15.54■□□□□ 0.08
PTPN21-201ENST00000328736 CDCA5Q96FF9 252 aa15.54■□□□□ 0.08
PTPN21-201ENST00000328736 ZNF607Q96SK3 696 aa15.54■□□□□ 0.08
PTPN21-201ENST00000328736 FNDC11Q9BVV2 318 aa15.54■□□□□ 0.08
PTPN21-201ENST00000328736 MRPS33Q9Y291 106 aaKnown RBP15.54■□□□□ 0.08
PTPN21-201ENST00000328736 SERPINB7O75635 380 aa15.53■□□□□ 0.08
PTPN21-201ENST00000328736 WSCD1Q658N2 575 aa15.53■□□□□ 0.08
PTPN21-201ENST00000328736 TEX47Q8TBZ9 253 aa15.53■□□□□ 0.08
PTPN21-201ENST00000328736 PORCNQ9H237 461 aa15.53■□□□□ 0.08
PTPN21-201ENST00000328736 SEMA6AQ9H2E6 1030 aa15.53■□□□□ 0.08
PTPN21-201ENST00000328736 ACP6Q9NPH0 428 aa15.53■□□□□ 0.08
PTPN21-201ENST00000328736 SYNPO2Q9UMS6 1093 aa15.53■□□□□ 0.08
PTPN21-201ENST00000328736 TRUB2O95900 331 aaKnown RBP15.53■□□□□ 0.08
PTPN21-201ENST00000328736 ATP5F1P24539 256 aaPredicted RBP15.53■□□□□ 0.08
PTPN21-201ENST00000328736 ABL2P42684 1182 aa15.53■□□□□ 0.08
PTPN21-201ENST00000328736 SLC12A3P55017 1021 aa15.53■□□□□ 0.08
PTPN21-201ENST00000328736 CNTN2Q02246 1040 aa15.53■□□□□ 0.08
PTPN21-201ENST00000328736 PTGES3Q15185 160 aaKnown RBP15.53■□□□□ 0.08
PTPN21-201ENST00000328736 HSFY1Q96LI6 401 aa15.53■□□□□ 0.08
PTPN21-201ENST00000328736 TSPAN18Q96SJ8 248 aa15.53■□□□□ 0.08
PTPN21-201ENST00000328736 KCNN2Q9H2S1 579 aa15.53■□□□□ 0.08
PTPN21-201ENST00000328736 BRD9Q9H8M2 597 aa15.53■□□□□ 0.08
PTPN21-201ENST00000328736 TOR4AQ9NXH8 423 aa15.53■□□□□ 0.08
PTPN21-201ENST00000328736 BTBD3Q9Y2F9 522 aa15.53■□□□□ 0.08
PTPN21-201ENST00000328736 LRCH1Q9Y2L9 728 aa15.53■□□□□ 0.08
PTPN21-201ENST00000328736 OTCP00480 354 aa15.53■□□□□ 0.08
PTPN21-201ENST00000328736 CCDC166P0CW27 439 aa15.53■□□□□ 0.08
PTPN21-201ENST00000328736 KELP23276 732 aa15.53■□□□□ 0.08
PTPN21-201ENST00000328736 BEX3Q00994 111 aa15.53■□□□□ 0.08
PTPN21-201ENST00000328736 GRM3Q14832 879 aa15.53■□□□□ 0.08
PTPN21-201ENST00000328736 ZC3H12AQ5D1E8 599 aaKnown RBP15.53■□□□□ 0.08
PTPN21-201ENST00000328736 TTC7BQ86TV6 843 aa15.53■□□□□ 0.08
PTPN21-201ENST00000328736 POU5F2Q8N7G0 328 aa15.53■□□□□ 0.08
PTPN21-201ENST00000328736 DYTNA2CJ06 578 aa15.53■□□□□ 0.08
PTPN21-201ENST00000328736 TSHRP16473 764 aa15.53■□□□□ 0.08
PTPN21-201ENST00000328736 PPM1AP35813 382 aa15.53■□□□□ 0.08
PTPN21-201ENST00000328736 PPP1R15BQ5SWA1 713 aa15.53■□□□□ 0.08
PTPN21-201ENST00000328736 GMPPBQ9Y5P6 360 aa15.53■□□□□ 0.08
PTPN21-201ENST00000328736 ULK1O75385 1050 aa15.52■□□□□ 0.08
PTPN21-201ENST00000328736 ADH1CP00326 375 aa15.52■□□□□ 0.08
PTPN21-201ENST00000328736 IL1BP01584 269 aa15.52■□□□□ 0.08
PTPN21-201ENST00000328736 SNRPB2P08579 225 aaKnown RBP15.52■□□□□ 0.08
PTPN21-201ENST00000328736 TTKP33981 857 aa15.52■□□□□ 0.08
PTPN21-201ENST00000328736 IDH2P48735 452 aaKnown RBP15.52■□□□□ 0.08
PTPN21-201ENST00000328736 PPIDQ08752 370 aaKnown RBP15.52■□□□□ 0.08
PTPN21-201ENST00000328736 MAPKAPK3Q16644 382 aa15.52■□□□□ 0.08
PTPN21-201ENST00000328736 PRR23CQ6ZRP0 262 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms