RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 SEPT6Q14141 434 aa9.75□□□□□ -0.85
PTPRA-202ENST00000318266 HERC3Q15034 1050 aa9.75□□□□□ -0.85
PTPRA-202ENST00000318266 ANO4Q32M45 955 aa9.75□□□□□ -0.85
PTPRA-202ENST00000318266 CEP97Q8IW35 865 aa9.75□□□□□ -0.85
PTPRA-202ENST00000318266 TXNDC5Q8NBS9 432 aaKnown RBP9.75□□□□□ -0.85
PTPRA-202ENST00000318266 MPHOSPH6Q99547 160 aaKnown RBP9.75□□□□□ -0.85
PTPRA-202ENST00000318266 PIF1Q9H611 641 aa9.75□□□□□ -0.85
PTPRA-202ENST00000318266 PCDH12Q9NPG4 1184 aa9.75□□□□□ -0.85
PTPRA-202ENST00000318266 GID8Q9NWU2 228 aa9.75□□□□□ -0.85
PTPRA-202ENST00000318266 VTI1BQ9UEU0 232 aa9.75□□□□□ -0.85
PTPRA-202ENST00000318266 DAPK2Q9UIK4 370 aa9.75□□□□□ -0.85
PTPRA-202ENST00000318266 HACL1Q9UJ83 578 aa9.75□□□□□ -0.85
PTPRA-202ENST00000318266 ADAM28Q9UKQ2 775 aa9.75□□□□□ -0.85
PTPRA-202ENST00000318266 FADS3Q9Y5Q0 445 aa9.75□□□□□ -0.85
PTPRA-202ENST00000318266 A8MU76 341 aa9.74□□□□□ -0.85
PTPRA-202ENST00000318266 NR5A2O00482 541 aa9.74□□□□□ -0.85
PTPRA-202ENST00000318266 H2AFYO75367 372 aaKnown RBP9.74□□□□□ -0.85
PTPRA-202ENST00000318266 E2F6O75461 281 aa9.74□□□□□ -0.85
PTPRA-202ENST00000318266 SNRPB2P08579 225 aaKnown RBP9.74□□□□□ -0.85
PTPRA-202ENST00000318266 MTHFD1P11586 935 aaKnown RBP9.74□□□□□ -0.85
PTPRA-202ENST00000318266 HMGCS2P54868 508 aa9.74□□□□□ -0.85
PTPRA-202ENST00000318266 OTUD3Q5T2D3 398 aaPredicted RBP9.74□□□□□ -0.85
PTPRA-202ENST00000318266 RWDD4Q6NW29 188 aaKnown RBP9.74□□□□□ -0.85
PTPRA-202ENST00000318266 CAMK1DQ8IU85 385 aa9.74□□□□□ -0.85
PTPRA-202ENST00000318266 TMCO5AQ8N6Q1 288 aa9.74□□□□□ -0.85
PTPRA-202ENST00000318266 ZNF280CQ8ND82 737 aa9.74□□□□□ -0.85
PTPRA-202ENST00000318266 OR2T34Q8NGX1 318 aa9.74□□□□□ -0.85
PTPRA-202ENST00000318266 OR2T3Q8NH03 318 aa9.74□□□□□ -0.85
PTPRA-202ENST00000318266 ACDQ96AP0 544 aa9.74□□□□□ -0.85
PTPRA-202ENST00000318266 TAMM41Q96BW9 452 aa9.74□□□□□ -0.85
PTPRA-202ENST00000318266 HNRNPABQ99729 332 aaKnown RBP9.74□□□□□ -0.85
PTPRA-202ENST00000318266 OSBPL2Q9H1P3 480 aa9.74□□□□□ -0.85
PTPRA-202ENST00000318266 DPEP3Q9H4B8 488 aa9.74□□□□□ -0.85
PTPRA-202ENST00000318266 PPEF2O14830 753 aa9.74□□□□□ -0.85
PTPRA-202ENST00000318266 ZBTB24O43167 697 aaPredicted RBP9.74□□□□□ -0.85
PTPRA-202ENST00000318266 MAFO75444 373 aaPredicted RBP9.74□□□□□ -0.85
PTPRA-202ENST00000318266 NFKBIAP25963 317 aa9.74□□□□□ -0.85
PTPRA-202ENST00000318266 ELK4P28324 431 aa9.74□□□□□ -0.85
PTPRA-202ENST00000318266 POLR2IP36954 125 aaKnown RBP9.74□□□□□ -0.85
PTPRA-202ENST00000318266 GJA8P48165 433 aa9.74□□□□□ -0.85
PTPRA-202ENST00000318266 NFATC3Q12968 1075 aa9.74□□□□□ -0.85
PTPRA-202ENST00000318266 TMEM132BQ14DG7 1078 aa9.74□□□□□ -0.85
PTPRA-202ENST00000318266 TARBP2Q15633 366 aaKnown RBP9.74□□□□□ -0.85
PTPRA-202ENST00000318266 STXBP2Q15833 593 aa9.74□□□□□ -0.85
PTPRA-202ENST00000318266 LY6KQ17RY6 165 aa9.74□□□□□ -0.85
PTPRA-202ENST00000318266 KIF19Q2TAC6 998 aa9.74□□□□□ -0.85
PTPRA-202ENST00000318266 DEFB115Q30KQ5 88 aa9.74□□□□□ -0.85
PTPRA-202ENST00000318266 TSTD2Q5T7W7 516 aa9.74□□□□□ -0.85
PTPRA-202ENST00000318266 XRRA1Q6P2D8 792 aa9.74□□□□□ -0.85
PTPRA-202ENST00000318266 ERMP1Q7Z2K6 904 aa9.74□□□□□ -0.85
PTPRA-202ENST00000318266 TNIP2Q8NFZ5 429 aa9.74□□□□□ -0.85
PTPRA-202ENST00000318266 OR6B3Q8NGW1 331 aa9.74□□□□□ -0.85
PTPRA-202ENST00000318266 SPPL2BQ8TCT7 592 aa9.74□□□□□ -0.85
PTPRA-202ENST00000318266 USP33Q8TEY7 942 aa9.74□□□□□ -0.85
PTPRA-202ENST00000318266 SGCDQ92629 289 aa9.74□□□□□ -0.85
PTPRA-202ENST00000318266 BEGAINQ9BUH8 593 aa9.74□□□□□ -0.85
PTPRA-202ENST00000318266 C1QTNF1Q9BXJ1 281 aa9.74□□□□□ -0.85
PTPRA-202ENST00000318266 NIFKQ9BYG3 293 aaKnown RBP9.74□□□□□ -0.85
PTPRA-202ENST00000318266 BRD8Q9H0E9 1235 aa9.74□□□□□ -0.85
PTPRA-202ENST00000318266 CXCL16Q9H2A7 254 aa9.74□□□□□ -0.85
PTPRA-202ENST00000318266 FANCEQ9HB96 536 aa9.74□□□□□ -0.85
PTPRA-202ENST00000318266 WARS2Q9UGM6 360 aaKnown RBP9.74□□□□□ -0.85
PTPRA-202ENST00000318266 MID2Q9UJV3 735 aa9.74□□□□□ -0.85
PTPRA-202ENST00000318266 ACOT9Q9Y305 439 aa9.74□□□□□ -0.85
PTPRA-202ENST00000318266 DHRS12A0PJE2 317 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 H0YJX3 145 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 DPYSL4O14531 572 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 TOR1BO14657 336 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 NRP2O60462 931 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 SNAP29O95721 258 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 BCL10O95999 233 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 CCNA2P20248 432 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 KCNA5P22460 613 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 CSHL1Q14406 222 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 CARTPTQ16568 116 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 HSDL1Q3SXM5 330 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 SAMD4BQ5PRF9 694 aaKnown RBP9.73□□□□□ -0.85
PTPRA-202ENST00000318266 PRAMEF18Q5VWM3 479 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 TMEM214Q6NUQ4 689 aaKnown RBP9.73□□□□□ -0.85
PTPRA-202ENST00000318266 DCLRE1AQ6PJP8 1040 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 TMEM135Q86UB9 458 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 ZC3HC1Q86WB0 502 aaKnown RBP9.73□□□□□ -0.85
PTPRA-202ENST00000318266 CMTR2Q8IYT2 770 aaKnown RBP9.73□□□□□ -0.85
PTPRA-202ENST00000318266 TRPC4APQ8TEL6 797 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 RNF139Q8WU17 664 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 STYXQ8WUJ0 223 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 IL22Q9GZX6 179 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 NCKIPSDQ9NZQ3 722 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 SLC27A5Q9Y2P5 690 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 PTGDR2Q9Y5Y4 395 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 WDR81Q562E7 1941 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 TRPC5OSA6NMA1 111 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 SLCO1B7G3V0H7 640 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 INPP4BO15327 924 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 KDM1AO60341 852 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 OXSR1O95747 527 aaPredicted RBP9.73□□□□□ -0.85
PTPRA-202ENST00000318266 PGK1P00558 417 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 AHSGP02765 367 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 NCK1P16333 377 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 SULT1E1P49888 294 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms