RNA–Protein interactions for RNA: ENST00000310232.10

CCDC13-201, Transcript of coiled-coil domain containing 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC13, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-201ENST00000310232 IL22Q9GZX6 179 aa13.58□□□□□ -0.24
CCDC13-201ENST00000310232 PAIP1Q9H074 479 aaKnown RBP13.58□□□□□ -0.24
CCDC13-201ENST00000310232 BRD8Q9H0E9 1235 aa13.58□□□□□ -0.24
CCDC13-201ENST00000310232 DSEQ9UL01 958 aa13.58□□□□□ -0.24
CCDC13-201ENST00000310232 KIAA1257Q9ULG3 409 aa13.58□□□□□ -0.24
CCDC13-201ENST00000310232 C19orf81C9J6K1 198 aa13.57□□□□□ -0.24
CCDC13-201ENST00000310232 UBFD1O14562 309 aaKnown RBP13.57□□□□□ -0.24
CCDC13-201ENST00000310232 TRIM24O15164 1050 aa13.57□□□□□ -0.24
CCDC13-201ENST00000310232 MTHFD1P11586 935 aaKnown RBP13.57□□□□□ -0.24
CCDC13-201ENST00000310232 NR4A1P22736 598 aa13.57□□□□□ -0.24
CCDC13-201ENST00000310232 KCNC1P48547 511 aa13.57□□□□□ -0.24
CCDC13-201ENST00000310232 TNFAIP2Q03169 654 aa13.57□□□□□ -0.24
CCDC13-201ENST00000310232 PMS2P3Q13401 168 aa13.57□□□□□ -0.24
CCDC13-201ENST00000310232 NEDD8Q15843 81 aa13.57□□□□□ -0.24
CCDC13-201ENST00000310232 PLA2G4EQ3MJ16 856 aa13.57□□□□□ -0.24
CCDC13-201ENST00000310232 ZNF470Q6ECI4 717 aa13.57□□□□□ -0.24
CCDC13-201ENST00000310232 CYHR1Q6ZMK1 362 aa13.57□□□□□ -0.24
CCDC13-201ENST00000310232 MOB2Q70IA6 237 aa13.57□□□□□ -0.24
CCDC13-201ENST00000310232 PLPPR4Q7Z2D5 763 aa13.57□□□□□ -0.24
CCDC13-201ENST00000310232 DLG3Q92796 817 aa13.57□□□□□ -0.24
CCDC13-201ENST00000310232 SMARCAD1Q9H4L7 1026 aa13.57□□□□□ -0.24
CCDC13-201ENST00000310232 EVLQ9UI08 416 aaPredicted RBP13.57□□□□□ -0.24
CCDC13-201ENST00000310232 VPS28Q9UK41 221 aa13.57□□□□□ -0.24
CCDC13-201ENST00000310232 PMPCBO75439 489 aa13.57□□□□□ -0.24
CCDC13-201ENST00000310232 BNIP3Q12983 259 aa13.57□□□□□ -0.24
CCDC13-201ENST00000310232 SLC12A1Q13621 1099 aa13.57□□□□□ -0.24
CCDC13-201ENST00000310232 VGLL4Q14135 290 aa13.57□□□□□ -0.24
CCDC13-201ENST00000310232 PCSK7Q16549 785 aa13.57□□□□□ -0.24
CCDC13-201ENST00000310232 STRADAQ7RTN6 431 aa13.57□□□□□ -0.24
CCDC13-201ENST00000310232 ZNF554Q86TJ5 538 aa13.57□□□□□ -0.24
CCDC13-201ENST00000310232 PELI3Q8N2H9 469 aa13.57□□□□□ -0.24
CCDC13-201ENST00000310232 OLFM1Q99784 485 aa13.57□□□□□ -0.24
CCDC13-201ENST00000310232 SIK2Q9H0K1 926 aa13.57□□□□□ -0.24
CCDC13-201ENST00000310232 RHOJQ9H4E5 214 aa13.57□□□□□ -0.24
CCDC13-201ENST00000310232 GTF2IRD1Q9UHL9 959 aa13.57□□□□□ -0.24
CCDC13-201ENST00000310232 ZNF112Q9UJU3 913 aa13.57□□□□□ -0.24
CCDC13-201ENST00000310232 BTBD19C9JJ37 291 aa13.57□□□□□ -0.24
CCDC13-201ENST00000310232 DFFAO00273 331 aa13.57□□□□□ -0.24
CCDC13-201ENST00000310232 UBDO15205 165 aa13.57□□□□□ -0.24
CCDC13-201ENST00000310232 LGALS2P05162 132 aa13.57□□□□□ -0.24
CCDC13-201ENST00000310232 C8BP07358 591 aa13.57□□□□□ -0.24
CCDC13-201ENST00000310232 TGFB3P10600 412 aa13.57□□□□□ -0.24
CCDC13-201ENST00000310232 NCK1P16333 377 aa13.57□□□□□ -0.24
CCDC13-201ENST00000310232 TNK2Q07912 1038 aa13.57□□□□□ -0.24
CCDC13-201ENST00000310232 ATP1A4Q13733 1029 aa13.57□□□□□ -0.24
CCDC13-201ENST00000310232 C9orf57Q5W0N0 161 aa13.57□□□□□ -0.24
CCDC13-201ENST00000310232 LZTR1Q8N653 840 aa13.57□□□□□ -0.24
CCDC13-201ENST00000310232 AFG1LQ8WV93 481 aa13.57□□□□□ -0.24
CCDC13-201ENST00000310232 ANKRD49Q8WVL7 239 aa13.57□□□□□ -0.24
CCDC13-201ENST00000310232 SGCDQ92629 289 aa13.57□□□□□ -0.24
CCDC13-201ENST00000310232 OSBPL11Q9BXB4 747 aa13.57□□□□□ -0.24
CCDC13-201ENST00000310232 LTB4R2Q9NPC1 389 aa13.57□□□□□ -0.24
CCDC13-201ENST00000310232 NR5A2O00482 541 aa13.56□□□□□ -0.24
CCDC13-201ENST00000310232 RECQL4O94761 1208 aa13.56□□□□□ -0.24
CCDC13-201ENST00000310232 CAPNS1P04632 268 aa13.56□□□□□ -0.24
CCDC13-201ENST00000310232 ALDOCP09972 364 aaKnown RBP13.56□□□□□ -0.24
CCDC13-201ENST00000310232 USP17L7P0C7H9 530 aa13.56□□□□□ -0.24
CCDC13-201ENST00000310232 STMN1P16949 149 aa13.56□□□□□ -0.24
CCDC13-201ENST00000310232 HOXA11P31270 313 aaPredicted RBP13.56□□□□□ -0.24
CCDC13-201ENST00000310232 SH3BGRP55822 239 aaPredicted RBP13.56□□□□□ -0.24
CCDC13-201ENST00000310232 ZNF280AP59817 542 aaPredicted RBP13.56□□□□□ -0.24
CCDC13-201ENST00000310232 RAB10P61026 200 aa13.56□□□□□ -0.24
CCDC13-201ENST00000310232 CBX3Q13185 183 aa13.56□□□□□ -0.24
CCDC13-201ENST00000310232 VPS26BQ4G0F5 336 aa13.56□□□□□ -0.24
CCDC13-201ENST00000310232 LDLRAP1Q5SW96 308 aa13.56□□□□□ -0.24
CCDC13-201ENST00000310232 KIAA0319Q5VV43 1072 aa13.56□□□□□ -0.24
CCDC13-201ENST00000310232 TTC33Q6PID6 262 aaPredicted RBP13.56□□□□□ -0.24
CCDC13-201ENST00000310232 FUNDC1Q8IVP5 155 aa13.56□□□□□ -0.24
CCDC13-201ENST00000310232 NPY6RQ99463 290 aa13.56□□□□□ -0.24
CCDC13-201ENST00000310232 OSMRQ99650 979 aa13.56□□□□□ -0.24
CCDC13-201ENST00000310232 HAUS8Q9BT25 410 aa13.56□□□□□ -0.24
CCDC13-201ENST00000310232 ULBP1Q9BZM6 244 aa13.56□□□□□ -0.24
CCDC13-201ENST00000310232 UNC93B1Q9H1C4 597 aa13.56□□□□□ -0.24
CCDC13-201ENST00000310232 PNPLA3Q9NST1 481 aa13.56□□□□□ -0.24
CCDC13-201ENST00000310232 MIA3Q5JRA6 1907 aa13.56□□□□□ -0.24
CCDC13-201ENST00000310232 NME4O00746 187 aa13.56□□□□□ -0.24
CCDC13-201ENST00000310232 GAS2O43903 313 aaKnown RBP13.56□□□□□ -0.24
CCDC13-201ENST00000310232 BDNFP23560 247 aa13.56□□□□□ -0.24
CCDC13-201ENST00000310232 ADRA1BP35368 520 aa13.56□□□□□ -0.24
CCDC13-201ENST00000310232 TKTL1P51854 596 aa13.56□□□□□ -0.24
CCDC13-201ENST00000310232 PAFAH1B3Q15102 231 aaKnown RBP13.56□□□□□ -0.24
CCDC13-201ENST00000310232 BORAQ6PGQ7 559 aa13.56□□□□□ -0.24
CCDC13-201ENST00000310232 PAQR9Q6ZVX9 377 aa13.56□□□□□ -0.24
CCDC13-201ENST00000310232 GPR141Q7Z602 305 aa13.56□□□□□ -0.24
CCDC13-201ENST00000310232 CUZD1Q86UP6 607 aa13.56□□□□□ -0.24
CCDC13-201ENST00000310232 PIM3Q86V86 326 aa13.56□□□□□ -0.24
CCDC13-201ENST00000310232 RBM12BQ8IXT5 1001 aaKnown RBP13.56□□□□□ -0.24
CCDC13-201ENST00000310232 KCNA7Q96RP8 456 aa13.56□□□□□ -0.24
CCDC13-201ENST00000310232 GBA3Q9H227 469 aa13.56□□□□□ -0.24
CCDC13-201ENST00000310232 SNX25Q9H3E2 840 aa13.56□□□□□ -0.24
CCDC13-201ENST00000310232 CLK4Q9HAZ1 481 aaKnown RBP13.56□□□□□ -0.24
CCDC13-201ENST00000310232 SPAG4Q9NPE6 437 aa13.56□□□□□ -0.24
CCDC13-201ENST00000310232 INIPQ9NRY2 104 aa13.56□□□□□ -0.24
CCDC13-201ENST00000310232 DDIT4Q9NX09 232 aa13.56□□□□□ -0.24
CCDC13-201ENST00000310232 ERAP1Q9NZ08 941 aa13.56□□□□□ -0.24
CCDC13-201ENST00000310232 OAZ3Q9UMX2 235 aa13.56□□□□□ -0.24
CCDC13-201ENST00000310232 GMEB1Q9Y692 573 aa13.56□□□□□ -0.24
CCDC13-201ENST00000310232 TRIP12Q14669 1992 aaPredicted RBP13.55□□□□□ -0.24
CCDC13-201ENST00000310232 NFKBIEO00221 500 aa13.55□□□□□ -0.24
CCDC13-201ENST00000310232 GPC4O75487 556 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms