RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 CTBP1Q13363 440 aa16.06■□□□□ 0.16
USP42-201ENST00000306177 TYW3Q6IPR3 259 aaKnown RBP16.06■□□□□ 0.16
USP42-201ENST00000306177 ZNF544Q6NX49 715 aa16.06■□□□□ 0.16
USP42-201ENST00000306177 MON1BQ7L1V2 547 aa16.06■□□□□ 0.16
USP42-201ENST00000306177 TRABD2AQ86V40 505 aa16.06■□□□□ 0.16
USP42-201ENST00000306177 OMDQ99983 421 aa16.06■□□□□ 0.16
USP42-201ENST00000306177 GOLGA2P5Q9HBQ8 144 aa16.06■□□□□ 0.16
USP42-201ENST00000306177 TMPRSS4Q9NRS4 437 aa16.06■□□□□ 0.16
USP42-201ENST00000306177 DUX4Q9UBX2 424 aa16.06■□□□□ 0.16
USP42-201ENST00000306177 PRKAG3Q9UGI9 489 aa16.06■□□□□ 0.16
USP42-201ENST00000306177 MTF2Q9Y483 593 aaPredicted RBP16.06■□□□□ 0.16
USP42-201ENST00000306177 ADRA1BP35368 520 aa16.06■□□□□ 0.16
USP42-201ENST00000306177 WNT3AP56704 352 aa16.06■□□□□ 0.16
USP42-201ENST00000306177 LLGL2Q6P1M3 1020 aa16.06■□□□□ 0.16
USP42-201ENST00000306177 LUZP2Q86TE4 346 aa16.06■□□□□ 0.16
USP42-201ENST00000306177 TTC7BQ86TV6 843 aa16.06■□□□□ 0.16
USP42-201ENST00000306177 PYDC1Q8WXC3 89 aa16.06■□□□□ 0.16
USP42-201ENST00000306177 TRAPPC9Q96Q05 1148 aa16.06■□□□□ 0.16
USP42-201ENST00000306177 SYT17Q9BSW7 474 aa16.06■□□□□ 0.16
USP42-201ENST00000306177 RIBC2Q9H4K1 309 aa16.06■□□□□ 0.16
USP42-201ENST00000306177 XPR1Q9UBH6 696 aa16.06■□□□□ 0.16
USP42-201ENST00000306177 C1QTNF3-AMACRE9PGA6 284 aa16.05■□□□□ 0.16
USP42-201ENST00000306177 UBXN8O00124 270 aa16.05■□□□□ 0.16
USP42-201ENST00000306177 FKTNO75072 461 aa16.05■□□□□ 0.16
USP42-201ENST00000306177 DRD4P21917 467 aa16.05■□□□□ 0.16
USP42-201ENST00000306177 CTNNB1P35222 781 aa16.05■□□□□ 0.16
USP42-201ENST00000306177 TMED10P49755 219 aaKnown RBP16.05■□□□□ 0.16
USP42-201ENST00000306177 SLC25A3Q00325 362 aa16.05■□□□□ 0.16
USP42-201ENST00000306177 ZNF276Q8N554 614 aa16.05■□□□□ 0.16
USP42-201ENST00000306177 OR4L1Q8NH43 312 aa16.05■□□□□ 0.16
USP42-201ENST00000306177 MARK4Q96L34 752 aa16.05■□□□□ 0.16
USP42-201ENST00000306177 MAGEB10Q96LZ2 347 aaPredicted RBP16.05■□□□□ 0.16
USP42-201ENST00000306177 SEMA6AQ9H2E6 1030 aa16.05■□□□□ 0.16
USP42-201ENST00000306177 PDZD7Q9H5P4 517 aa16.05■□□□□ 0.16
USP42-201ENST00000306177 ERVK-5Q9HDB9 667 aa16.05■□□□□ 0.16
USP42-201ENST00000306177 LEF1Q9UJU2 399 aaPredicted RBP16.05■□□□□ 0.16
USP42-201ENST00000306177 ULK1O75385 1050 aa16.05■□□□□ 0.16
USP42-201ENST00000306177 FTH1P02794 183 aa16.05■□□□□ 0.16
USP42-201ENST00000306177 HIRAP54198 1017 aaPredicted RBP16.05■□□□□ 0.16
USP42-201ENST00000306177 GALNT3Q14435 633 aa16.05■□□□□ 0.16
USP42-201ENST00000306177 CSPG4P5Q96PW8 444 aa16.05■□□□□ 0.16
USP42-201ENST00000306177 TTPALQ9BTX7 342 aa16.05■□□□□ 0.16
USP42-201ENST00000306177 PCDHGC3Q9UN70 934 aa16.05■□□□□ 0.16
USP42-201ENST00000306177 DLG5Q8TDM6 1919 aa16.05■□□□□ 0.16
USP42-201ENST00000306177 CST3P01034 146 aaPredicted RBP16.05■□□□□ 0.16
USP42-201ENST00000306177 THOP1P52888 689 aa16.05■□□□□ 0.16
USP42-201ENST00000306177 JAM2P57087 298 aa16.05■□□□□ 0.16
USP42-201ENST00000306177 EXOC2Q96KP1 924 aa16.05■□□□□ 0.16
USP42-201ENST00000306177 FAM124BQ9H5Z6 455 aaPredicted RBP16.05■□□□□ 0.16
USP42-201ENST00000306177 KLHL3Q9UH77 587 aa16.05■□□□□ 0.16
USP42-201ENST00000306177 RGSL1A5PLK6 1076 aa16.05■□□□□ 0.16
USP42-201ENST00000306177 H3BN98 237 aa16.05■□□□□ 0.16
USP42-201ENST00000306177 PIAS1O75925 651 aa16.05■□□□□ 0.16
USP42-201ENST00000306177 PIRTP0C851 137 aa16.05■□□□□ 0.16
USP42-201ENST00000306177 NOS3P29474 1203 aa16.05■□□□□ 0.16
USP42-201ENST00000306177 GPR1P46091 355 aa16.05■□□□□ 0.16
USP42-201ENST00000306177 PURAQ00577 322 aaKnown RBP16.05■□□□□ 0.16
USP42-201ENST00000306177 ARMCX4Q5H9R4 360 aa16.05■□□□□ 0.16
USP42-201ENST00000306177 RAET1GQ6H3X3 334 aa16.05■□□□□ 0.16
USP42-201ENST00000306177 ADHFE1Q8IWW8 467 aa16.05■□□□□ 0.16
USP42-201ENST00000306177 HDAC10Q969S8 669 aa16.05■□□□□ 0.16
USP42-201ENST00000306177 SKA1Q96BD8 255 aa16.05■□□□□ 0.16
USP42-201ENST00000306177 RNPEPL1Q9HAU8 725 aa16.05■□□□□ 0.16
USP42-201ENST00000306177 ADAM30Q9UKF2 790 aa16.05■□□□□ 0.16
USP42-201ENST00000306177 PAIP2BQ9ULR5 123 aaKnown RBP16.05■□□□□ 0.16
USP42-201ENST00000306177 SOWAHBA6NEL2 793 aa16.04■□□□□ 0.16
USP42-201ENST00000306177 SERPINI2O75830 405 aa16.04■□□□□ 0.16
USP42-201ENST00000306177 SERPINA6P08185 405 aa16.04■□□□□ 0.16
USP42-201ENST00000306177 NTSP30990 170 aa16.04■□□□□ 0.16
USP42-201ENST00000306177 IFNGR2P38484 337 aa16.04■□□□□ 0.16
USP42-201ENST00000306177 ITGA7Q13683 1181 aa16.04■□□□□ 0.16
USP42-201ENST00000306177 INTS11Q5TA45 600 aaKnown RBP16.04■□□□□ 0.16
USP42-201ENST00000306177 VSTM1Q6UX27 236 aa16.04■□□□□ 0.16
USP42-201ENST00000306177 RP9Q8TA86 221 aaKnown RBP16.04■□□□□ 0.16
USP42-201ENST00000306177 OSBPL10Q9BXB5 764 aa16.04■□□□□ 0.16
USP42-201ENST00000306177 GLOD4Q9HC38 313 aa16.04■□□□□ 0.16
USP42-201ENST00000306177 ZBTB48P10074 688 aaPredicted RBP16.04■□□□□ 0.16
USP42-201ENST00000306177 GNA13Q14344 377 aa16.04■□□□□ 0.16
USP42-201ENST00000306177 CCDC157Q569K6 752 aa16.04■□□□□ 0.16
USP42-201ENST00000306177 CES5AQ6NT32 575 aa16.04■□□□□ 0.16
USP42-201ENST00000306177 GPRIN3Q6ZVF9 776 aa16.04■□□□□ 0.16
USP42-201ENST00000306177 REEP1Q9H902 201 aa16.04■□□□□ 0.16
USP42-201ENST00000306177 ZNF510Q9Y2H8 683 aa16.04■□□□□ 0.16
USP42-201ENST00000306177 TREHO43280 583 aa16.04■□□□□ 0.16
USP42-201ENST00000306177 TSPAN1O60635 241 aa16.04■□□□□ 0.16
USP42-201ENST00000306177 TPSB2P20231 275 aa16.04■□□□□ 0.16
USP42-201ENST00000306177 TPSAB1Q15661 275 aa16.04■□□□□ 0.16
USP42-201ENST00000306177 HLA-DQA1Q5Y7H0 255 aa16.04■□□□□ 0.16
USP42-201ENST00000306177 IRGCQ6NXR0 463 aa16.04■□□□□ 0.16
USP42-201ENST00000306177 SERPINA13PQ6UXR4 307 aa16.04■□□□□ 0.16
USP42-201ENST00000306177 RORBQ92753 470 aa16.04■□□□□ 0.16
USP42-201ENST00000306177 SPAG4Q9NPE6 437 aa16.04■□□□□ 0.16
USP42-201ENST00000306177 VPS45Q9NRW7 570 aa16.04■□□□□ 0.16
USP42-201ENST00000306177 OTCP00480 354 aa16.04■□□□□ 0.16
USP42-201ENST00000306177 GTF2E2P29084 291 aaKnown RBP16.04■□□□□ 0.16
USP42-201ENST00000306177 PSME3P61289 254 aa16.04■□□□□ 0.16
USP42-201ENST00000306177 TARBP2Q15633 366 aaKnown RBP16.04■□□□□ 0.16
USP42-201ENST00000306177 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.04■□□□□ 0.16
USP42-201ENST00000306177 AADATQ8N5Z0 425 aa16.04■□□□□ 0.16
USP42-201ENST00000306177 C1orf127Q8N9H9 656 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms