RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 ATXN1LP0C7T5 689 aaKnown RBP11.49□□□□□ -0.57
SCG2-201ENST00000305409 ELF1P32519 619 aa11.49□□□□□ -0.57
SCG2-201ENST00000305409 MAGEA12P43365 314 aa11.49□□□□□ -0.57
SCG2-201ENST00000305409 CYP4F8P98187 520 aa11.49□□□□□ -0.57
SCG2-201ENST00000305409 DSG1Q02413 1049 aa11.49□□□□□ -0.57
SCG2-201ENST00000305409 DLG1Q12959 904 aa11.49□□□□□ -0.57
SCG2-201ENST00000305409 MSLNQ13421 630 aaPredicted RBP11.49□□□□□ -0.57
SCG2-201ENST00000305409 TMEM150AQ86TG1 271 aa11.49□□□□□ -0.57
SCG2-201ENST00000305409 TRIM42Q8IWZ5 723 aa11.49□□□□□ -0.57
SCG2-201ENST00000305409 TEX26Q8N6G2 289 aa11.49□□□□□ -0.57
SCG2-201ENST00000305409 OR13C4Q8NGS5 318 aa11.49□□□□□ -0.57
SCG2-201ENST00000305409 SKA1Q96BD8 255 aa11.49□□□□□ -0.57
SCG2-201ENST00000305409 IFT43Q96FT9 208 aa11.49□□□□□ -0.57
SCG2-201ENST00000305409 TBATAQ96M53 351 aa11.49□□□□□ -0.57
SCG2-201ENST00000305409 TOX2Q96NM4 488 aa11.49□□□□□ -0.57
SCG2-201ENST00000305409 SORT1Q99523 831 aa11.49□□□□□ -0.57
SCG2-201ENST00000305409 SEZ6LQ9BYH1 1024 aa11.49□□□□□ -0.57
SCG2-201ENST00000305409 ARHGEF3Q9NR81 526 aa11.49□□□□□ -0.57
SCG2-201ENST00000305409 CRYL1Q9Y2S2 319 aa11.49□□□□□ -0.57
SCG2-201ENST00000305409 TGDSO95455 350 aa11.49□□□□□ -0.57
SCG2-201ENST00000305409 URODP06132 367 aa11.49□□□□□ -0.57
SCG2-201ENST00000305409 CSE1LP55060 971 aaKnown RBP11.49□□□□□ -0.57
SCG2-201ENST00000305409 WDR5P61964 334 aaKnown RBP11.49□□□□□ -0.57
SCG2-201ENST00000305409 SMAD3P84022 425 aaKnown RBP11.49□□□□□ -0.57
SCG2-201ENST00000305409 UBAP2LQ14157 1087 aaKnown RBP11.49□□□□□ -0.57
SCG2-201ENST00000305409 RCN2Q14257 317 aa11.49□□□□□ -0.57
SCG2-201ENST00000305409 TSTD2Q5T7W7 516 aa11.49□□□□□ -0.57
SCG2-201ENST00000305409 TMCO4Q5TGY1 634 aa11.49□□□□□ -0.57
SCG2-201ENST00000305409 MAVSQ7Z434 540 aa11.49□□□□□ -0.57
SCG2-201ENST00000305409 CLEC14AQ86T13 490 aa11.49□□□□□ -0.57
SCG2-201ENST00000305409 CENPLQ8N0S6 344 aaPredicted RBP11.49□□□□□ -0.57
SCG2-201ENST00000305409 PDCD6IPQ8WUM4 868 aaKnown RBP11.49□□□□□ -0.57
SCG2-201ENST00000305409 DNAJC1Q96KC8 554 aaKnown RBP11.49□□□□□ -0.57
SCG2-201ENST00000305409 POLR1EQ9GZS1 481 aaKnown RBP11.49□□□□□ -0.57
SCG2-201ENST00000305409 MUC3BQ9H195 1237 aa11.49□□□□□ -0.57
SCG2-201ENST00000305409 ATP13A1Q9HD20 1204 aa11.49□□□□□ -0.57
SCG2-201ENST00000305409 TXLNGQ9NUQ3 528 aa11.49□□□□□ -0.57
SCG2-201ENST00000305409 PCDHGC4Q9Y5F7 938 aa11.49□□□□□ -0.57
SCG2-201ENST00000305409 AP3B1O00203 1094 aa11.48□□□□□ -0.57
SCG2-201ENST00000305409 SERPINE1P05121 402 aa11.48□□□□□ -0.57
SCG2-201ENST00000305409 CHRNGP07510 517 aa11.48□□□□□ -0.57
SCG2-201ENST00000305409 RHOCP08134 193 aa11.48□□□□□ -0.57
SCG2-201ENST00000305409 SBK3P0C264 359 aa11.48□□□□□ -0.57
SCG2-201ENST00000305409 MZF1P28698 734 aaPredicted RBP11.48□□□□□ -0.57
SCG2-201ENST00000305409 MAPKAPK2P49137 400 aa11.48□□□□□ -0.57
SCG2-201ENST00000305409 RNF219Q5W0B1 726 aaPredicted RBP11.48□□□□□ -0.57
SCG2-201ENST00000305409 RPS27LQ71UM5 84 aaKnown RBP11.48□□□□□ -0.57
SCG2-201ENST00000305409 CCDC91Q7Z6B0 441 aa11.48□□□□□ -0.57
SCG2-201ENST00000305409 TREML1Q86YW5 311 aa11.48□□□□□ -0.57
SCG2-201ENST00000305409 HS6ST3Q8IZP7 471 aa11.48□□□□□ -0.57
SCG2-201ENST00000305409 CARNMT1Q8N4J0 409 aa11.48□□□□□ -0.57
SCG2-201ENST00000305409 ZNF689Q96CS4 500 aaPredicted RBP11.48□□□□□ -0.57
SCG2-201ENST00000305409 OLFM1Q99784 485 aa11.48□□□□□ -0.57
SCG2-201ENST00000305409 C1QTNF1Q9BXJ1 281 aa11.48□□□□□ -0.57
SCG2-201ENST00000305409 CRISPLD2Q9H0B8 497 aa11.48□□□□□ -0.57
SCG2-201ENST00000305409 SMG9Q9H0W8 520 aaKnown RBP11.48□□□□□ -0.57
SCG2-201ENST00000305409 PDFQ9HBH1 243 aa11.48□□□□□ -0.57
SCG2-201ENST00000305409 MAN1C1Q9NR34 630 aa11.48□□□□□ -0.57
SCG2-201ENST00000305409 SPG21Q9NZD8 308 aa11.48□□□□□ -0.57
SCG2-201ENST00000305409 DOCK6Q96HP0 2047 aa11.48□□□□□ -0.57
SCG2-201ENST00000305409 HEATR9A2RTY3 570 aa11.48□□□□□ -0.57
SCG2-201ENST00000305409 NEMP2A6NFY4 417 aa11.48□□□□□ -0.57
SCG2-201ENST00000305409 MPOP05164 745 aa11.48□□□□□ -0.57
SCG2-201ENST00000305409 ENO1P06733 434 aaKnown RBP11.48□□□□□ -0.57
SCG2-201ENST00000305409 PDHA1P08559 390 aa11.48□□□□□ -0.57
SCG2-201ENST00000305409 RAG1P15918 1043 aa11.48□□□□□ -0.57
SCG2-201ENST00000305409 CD151P48509 253 aa11.48□□□□□ -0.57
SCG2-201ENST00000305409 KPNA1P52294 538 aaPredicted RBP11.48□□□□□ -0.57
SCG2-201ENST00000305409 OXCT1P55809 520 aa11.48□□□□□ -0.57
SCG2-201ENST00000305409 CDK18Q07002 472 aa11.48□□□□□ -0.57
SCG2-201ENST00000305409 INSCQ1MX18 579 aa11.48□□□□□ -0.57
SCG2-201ENST00000305409 STXBP5Q5T5C0 1151 aa11.48□□□□□ -0.57
SCG2-201ENST00000305409 FSTL5Q8N475 847 aaPredicted RBP11.48□□□□□ -0.57
SCG2-201ENST00000305409 ZNF781Q8N8C0 355 aa11.48□□□□□ -0.57
SCG2-201ENST00000305409 FBXO27Q8NI29 283 aa11.48□□□□□ -0.57
SCG2-201ENST00000305409 WFDC5Q8TCV5 224 aa11.48□□□□□ -0.57
SCG2-201ENST00000305409 ISL2Q96A47 359 aa11.48□□□□□ -0.57
SCG2-201ENST00000305409 TBC1D10AQ9BXI6 508 aa11.48□□□□□ -0.57
SCG2-201ENST00000305409 ACE2Q9BYF1 805 aaPredicted RBP11.48□□□□□ -0.57
SCG2-201ENST00000305409 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.47□□□□□ -0.57
SCG2-201ENST00000305409 LDB2O43679 373 aa11.47□□□□□ -0.57
SCG2-201ENST00000305409 PAMP19021 973 aa11.47□□□□□ -0.57
SCG2-201ENST00000305409 CDH4P55283 916 aa11.47□□□□□ -0.57
SCG2-201ENST00000305409 YBEYP58557 167 aaPredicted RBP11.47□□□□□ -0.57
SCG2-201ENST00000305409 ABCE1P61221 599 aaKnown RBP11.47□□□□□ -0.57
SCG2-201ENST00000305409 PRAMEP78395 509 aa11.47□□□□□ -0.57
SCG2-201ENST00000305409 ZNF177Q13360 481 aaPredicted RBP11.47□□□□□ -0.57
SCG2-201ENST00000305409 FRG1Q14331 258 aaKnown RBP11.47□□□□□ -0.57
SCG2-201ENST00000305409 CSHL1Q14406 222 aa11.47□□□□□ -0.57
SCG2-201ENST00000305409 VEPH1Q14D04 833 aa11.47□□□□□ -0.57
SCG2-201ENST00000305409 KIAA0930Q6ICG6 404 aaPredicted RBP11.47□□□□□ -0.57
SCG2-201ENST00000305409 PIM3Q86V86 326 aa11.47□□□□□ -0.57
SCG2-201ENST00000305409 LONP2Q86WA8 852 aa11.47□□□□□ -0.57
SCG2-201ENST00000305409 TMEM151AQ8N4L1 468 aa11.47□□□□□ -0.57
SCG2-201ENST00000305409 MAB21L3Q8N8X9 362 aa11.47□□□□□ -0.57
SCG2-201ENST00000305409 C2CD4AQ8NCU7 369 aaPredicted RBP11.47□□□□□ -0.57
SCG2-201ENST00000305409 PIWIL2Q8TC59 973 aaKnown RBP11.47□□□□□ -0.57
SCG2-201ENST00000305409 ZNF398Q8TD17 642 aa11.47□□□□□ -0.57
SCG2-201ENST00000305409 RMDN1Q96DB5 314 aa11.47□□□□□ -0.57
SCG2-201ENST00000305409 MIPEPQ99797 713 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms