RNA–Protein interactions for RNA: ENST00000296343.9

RUBCN-202, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUBCN, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCN-202ENST00000296343 GSC2O15499 205 aa13.33□□□□□ -0.28
RUBCN-202ENST00000296343 COCHO43405 550 aa13.33□□□□□ -0.28
RUBCN-202ENST00000296343 CCDC22O60826 627 aa13.33□□□□□ -0.28
RUBCN-202ENST00000296343 PIGNO95427 931 aa13.33□□□□□ -0.28
RUBCN-202ENST00000296343 KCNA5P22460 613 aa13.33□□□□□ -0.28
RUBCN-202ENST00000296343 CDKN1CP49918 316 aaPredicted RBP13.33□□□□□ -0.28
RUBCN-202ENST00000296343 SERPINH1P50454 418 aaKnown RBP13.33□□□□□ -0.28
RUBCN-202ENST00000296343 CDH13P55290 713 aa13.33□□□□□ -0.28
RUBCN-202ENST00000296343 PPM1LQ5SGD2 360 aa13.33□□□□□ -0.28
RUBCN-202ENST00000296343 ARTNQ5T4W7 220 aa13.33□□□□□ -0.28
RUBCN-202ENST00000296343 TXNDC8Q6A555 127 aa13.33□□□□□ -0.28
RUBCN-202ENST00000296343 RANBP10Q6VN20 620 aa13.33□□□□□ -0.28
RUBCN-202ENST00000296343 TPGS1Q6ZTW0 290 aa13.33□□□□□ -0.28
RUBCN-202ENST00000296343 NPAS4Q8IUM7 802 aa13.33□□□□□ -0.28
RUBCN-202ENST00000296343 CENPLQ8N0S6 344 aaPredicted RBP13.33□□□□□ -0.28
RUBCN-202ENST00000296343 DCBLD1Q8N8Z6 715 aa13.33□□□□□ -0.28
RUBCN-202ENST00000296343 TDRD5Q8NAT2 981 aaKnown RBP13.33□□□□□ -0.28
RUBCN-202ENST00000296343 C7orf26Q96N11 449 aa13.33□□□□□ -0.28
RUBCN-202ENST00000296343 BTBD10Q9BSF8 475 aa13.33□□□□□ -0.28
RUBCN-202ENST00000296343 VN1R3Q9BXE9 311 aa13.33□□□□□ -0.28
RUBCN-202ENST00000296343 ABCG8Q9H221 673 aa13.33□□□□□ -0.28
RUBCN-202ENST00000296343 ACOT9Q9Y305 439 aa13.33□□□□□ -0.28
RUBCN-202ENST00000296343 FKTNO75072 461 aa13.32□□□□□ -0.28
RUBCN-202ENST00000296343 SNNO75324 88 aaPredicted RBP13.32□□□□□ -0.28
RUBCN-202ENST00000296343 PEX11BO96011 259 aa13.32□□□□□ -0.28
RUBCN-202ENST00000296343 CCDC166P0CW27 439 aa13.32□□□□□ -0.28
RUBCN-202ENST00000296343 TACR2P21452 398 aa13.32□□□□□ -0.28
RUBCN-202ENST00000296343 CORO1AP31146 461 aaKnown RBP13.32□□□□□ -0.28
RUBCN-202ENST00000296343 ATP5C1P36542 298 aaKnown RBP13.32□□□□□ -0.28
RUBCN-202ENST00000296343 DEFB103AP81534 67 aa13.32□□□□□ -0.28
RUBCN-202ENST00000296343 ANO4Q32M45 955 aa13.32□□□□□ -0.28
RUBCN-202ENST00000296343 PDPK2PQ6A1A2 396 aa13.32□□□□□ -0.28
RUBCN-202ENST00000296343 HEXDCQ8WVB3 486 aa13.32□□□□□ -0.28
RUBCN-202ENST00000296343 ANKRD49Q8WVL7 239 aa13.32□□□□□ -0.28
RUBCN-202ENST00000296343 MYLIPQ8WY64 445 aa13.32□□□□□ -0.28
RUBCN-202ENST00000296343 C8orf48Q96LL4 319 aa13.32□□□□□ -0.28
RUBCN-202ENST00000296343 RAB3IPQ96QF0 476 aaPredicted RBP13.32□□□□□ -0.28
RUBCN-202ENST00000296343 TLE6Q9H808 572 aa13.32□□□□□ -0.28
RUBCN-202ENST00000296343 SARS2Q9NP81 518 aaKnown RBP13.32□□□□□ -0.28
RUBCN-202ENST00000296343 EZRP15311 586 aaKnown RBP13.32□□□□□ -0.28
RUBCN-202ENST00000296343 CNTFP26441 200 aa13.32□□□□□ -0.28
RUBCN-202ENST00000296343 HARS2P49590 506 aaKnown RBP13.32□□□□□ -0.28
RUBCN-202ENST00000296343 IDH3AP50213 366 aa13.32□□□□□ -0.28
RUBCN-202ENST00000296343 RASSF2P50749 326 aa13.32□□□□□ -0.28
RUBCN-202ENST00000296343 NME5P56597 212 aa13.32□□□□□ -0.28
RUBCN-202ENST00000296343 TWF1Q12792 350 aa13.32□□□□□ -0.28
RUBCN-202ENST00000296343 LBRQ14739 615 aaKnown RBP13.32□□□□□ -0.28
RUBCN-202ENST00000296343 TCHHL1Q5QJ38 904 aaPredicted RBP13.32□□□□□ -0.28
RUBCN-202ENST00000296343 GPR158Q5T848 1215 aa13.32□□□□□ -0.28
RUBCN-202ENST00000296343 SNX30Q5VWJ9 437 aa13.32□□□□□ -0.28
RUBCN-202ENST00000296343 CARNMT1Q8N4J0 409 aa13.32□□□□□ -0.28
RUBCN-202ENST00000296343 CFAP61Q8NHU2 1237 aa13.32□□□□□ -0.28
RUBCN-202ENST00000296343 ESAMQ96AP7 390 aa13.32□□□□□ -0.28
RUBCN-202ENST00000296343 FUBP3Q96I24 572 aaKnown RBP eCLIP13.32□□□□□ -0.28
RUBCN-202ENST00000296343 NSMCE3Q96MG7 304 aa13.32□□□□□ -0.28
RUBCN-202ENST00000296343 KIFC1Q9BW19 673 aa13.32□□□□□ -0.28
RUBCN-202ENST00000296343 ALG9Q9H6U8 611 aa13.32□□□□□ -0.28
RUBCN-202ENST00000296343 GPAMQ9HCL2 828 aa13.32□□□□□ -0.28
RUBCN-202ENST00000296343 ERI2A8K979 691 aaKnown RBP13.31□□□□□ -0.28
RUBCN-202ENST00000296343 SYN3O14994 580 aa13.31□□□□□ -0.28
RUBCN-202ENST00000296343 CFLARO15519 480 aa13.31□□□□□ -0.28
RUBCN-202ENST00000296343 TIMM44O43615 452 aa13.31□□□□□ -0.28
RUBCN-202ENST00000296343 SIN3BO75182 1162 aa13.31□□□□□ -0.28
RUBCN-202ENST00000296343 BAG2O95816 211 aa13.31□□□□□ -0.28
RUBCN-202ENST00000296343 SOX11P35716 441 aa13.31□□□□□ -0.28
RUBCN-202ENST00000296343 ARCN1P48444 511 aaKnown RBP13.31□□□□□ -0.28
RUBCN-202ENST00000296343 CCDC15Q0P6D6 951 aa13.31□□□□□ -0.28
RUBCN-202ENST00000296343 GEN1Q17RS7 908 aa13.31□□□□□ -0.28
RUBCN-202ENST00000296343 FSCBQ5H9T9 825 aa13.31□□□□□ -0.28
RUBCN-202ENST00000296343 TIGD7Q6NT04 549 aaPredicted RBP13.31□□□□□ -0.28
RUBCN-202ENST00000296343 TIFABQ6ZNK6 161 aa13.31□□□□□ -0.28
RUBCN-202ENST00000296343 TRIM42Q8IWZ5 723 aa13.31□□□□□ -0.28
RUBCN-202ENST00000296343 TTC1Q99614 292 aa13.31□□□□□ -0.28
RUBCN-202ENST00000296343 TRIM62Q9BVG3 475 aa13.31□□□□□ -0.28
RUBCN-202ENST00000296343 RHOJQ9H4E5 214 aa13.31□□□□□ -0.28
RUBCN-202ENST00000296343 KCNK4Q9NYG8 393 aa13.31□□□□□ -0.28
RUBCN-202ENST00000296343 ZDHHC2Q9UIJ5 367 aa13.31□□□□□ -0.28
RUBCN-202ENST00000296343 LRRC14BA6NHZ5 514 aa13.31□□□□□ -0.28
RUBCN-202ENST00000296343 C9JVG2 144 aa13.31□□□□□ -0.28
RUBCN-202ENST00000296343 K7ERQ8 282 aa13.31□□□□□ -0.28
RUBCN-202ENST00000296343 AIM2O14862 343 aa13.31□□□□□ -0.28
RUBCN-202ENST00000296343 TRIM13O60858 407 aa13.31□□□□□ -0.28
RUBCN-202ENST00000296343 MMP2P08253 660 aa13.31□□□□□ -0.28
RUBCN-202ENST00000296343 RHOQP17081 205 aa13.31□□□□□ -0.28
RUBCN-202ENST00000296343 TCN1P20061 433 aaPredicted RBP13.31□□□□□ -0.28
RUBCN-202ENST00000296343 FGFR3P22607 806 aa13.31□□□□□ -0.28
RUBCN-202ENST00000296343 ABL2P42684 1182 aa13.31□□□□□ -0.28
RUBCN-202ENST00000296343 LZTR1Q8N653 840 aa13.31□□□□□ -0.28
RUBCN-202ENST00000296343 OR13J1Q8NGT2 312 aa13.31□□□□□ -0.28
RUBCN-202ENST00000296343 PTCD3Q96EY7 689 aaKnown RBP13.31□□□□□ -0.28
RUBCN-202ENST00000296343 SLC45A3Q96JT2 553 aa13.31□□□□□ -0.28
RUBCN-202ENST00000296343 CLSTN3Q9BQT9 956 aa13.31□□□□□ -0.28
RUBCN-202ENST00000296343 ATP13A1Q9HD20 1204 aa13.31□□□□□ -0.28
RUBCN-202ENST00000296343 ENTPD7Q9NQZ7 604 aa13.31□□□□□ -0.28
RUBCN-202ENST00000296343 PPP6CO00743 305 aa13.3□□□□□ -0.28
RUBCN-202ENST00000296343 DLX3O60479 287 aa13.3□□□□□ -0.28
RUBCN-202ENST00000296343 SBK3P0C264 359 aa13.3□□□□□ -0.28
RUBCN-202ENST00000296343 SLC2A3P11169 496 aa13.3□□□□□ -0.28
RUBCN-202ENST00000296343 HNRNPDQ14103 355 aaKnown RBP13.3□□□□□ -0.28
RUBCN-202ENST00000296343 RCN1Q15293 331 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms