RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 GK5Q6ZS86 529 aa13.42□□□□□ -0.26
KCNIP3-201ENST00000295225 CNTD1Q8N815 330 aa13.42□□□□□ -0.26
KCNIP3-201ENST00000295225 PPTC7Q8NI37 304 aa13.42□□□□□ -0.26
KCNIP3-201ENST00000295225 GRIN3AQ8TCU5 1115 aa13.42□□□□□ -0.26
KCNIP3-201ENST00000295225 PHF21BQ96EK2 531 aa13.42□□□□□ -0.26
KCNIP3-201ENST00000295225 RHBDL2Q9NX52 303 aa13.42□□□□□ -0.26
KCNIP3-201ENST00000295225 XPR1Q9UBH6 696 aa13.42□□□□□ -0.26
KCNIP3-201ENST00000295225 RPL26L1Q9UNX3 145 aaKnown RBP13.42□□□□□ -0.26
KCNIP3-201ENST00000295225 SATB2Q9UPW6 733 aa13.42□□□□□ -0.26
KCNIP3-201ENST00000295225 GJB3O75712 270 aa13.41□□□□□ -0.26
KCNIP3-201ENST00000295225 KLHL2O95198 593 aa13.41□□□□□ -0.26
KCNIP3-201ENST00000295225 S100BP04271 92 aaPredicted RBP13.41□□□□□ -0.26
KCNIP3-201ENST00000295225 YBX3P16989 372 aaKnown RBP eCLIP13.41□□□□□ -0.26
KCNIP3-201ENST00000295225 EPHX2P34913 555 aa13.41□□□□□ -0.26
KCNIP3-201ENST00000295225 FDFT1P37268 417 aa13.41□□□□□ -0.26
KCNIP3-201ENST00000295225 MAXP61244 160 aa13.41□□□□□ -0.26
KCNIP3-201ENST00000295225 TUBA4AP68366 448 aa13.41□□□□□ -0.26
KCNIP3-201ENST00000295225 BCL2A1Q16548 175 aa13.41□□□□□ -0.26
KCNIP3-201ENST00000295225 TIFABQ6ZNK6 161 aa13.41□□□□□ -0.26
KCNIP3-201ENST00000295225 PSTKQ8IV42 348 aaKnown RBP13.41□□□□□ -0.26
KCNIP3-201ENST00000295225 DSELQ8IZU8 1212 aa13.41□□□□□ -0.26
KCNIP3-201ENST00000295225 FSTL5Q8N475 847 aaPredicted RBP13.41□□□□□ -0.26
KCNIP3-201ENST00000295225 BHLHE22Q8NFJ8 381 aaPredicted RBP13.41□□□□□ -0.26
KCNIP3-201ENST00000295225 PCED1BQ96HM7 432 aa13.41□□□□□ -0.26
KCNIP3-201ENST00000295225 VPS50Q96JG6 964 aa13.41□□□□□ -0.26
KCNIP3-201ENST00000295225 TMEM209Q96SK2 561 aa13.41□□□□□ -0.26
KCNIP3-201ENST00000295225 HNRNPABQ99729 332 aaKnown RBP13.41□□□□□ -0.26
KCNIP3-201ENST00000295225 KLHL4Q9C0H6 718 aa13.41□□□□□ -0.26
KCNIP3-201ENST00000295225 OR12D3Q9UGF7 316 aa13.41□□□□□ -0.26
KCNIP3-201ENST00000295225 ATPIF1Q9UII2 106 aa13.41□□□□□ -0.26
KCNIP3-201ENST00000295225 CLEC11AQ9Y240 323 aa13.41□□□□□ -0.26
KCNIP3-201ENST00000295225 SF3B1O75533 1304 aaKnown RBP eCLIP13.41□□□□□ -0.26
KCNIP3-201ENST00000295225 DCLK1O15075 740 aa13.41□□□□□ -0.26
KCNIP3-201ENST00000295225 LRIG2O94898 1065 aa13.41□□□□□ -0.26
KCNIP3-201ENST00000295225 IL1BP01584 269 aa13.41□□□□□ -0.26
KCNIP3-201ENST00000295225 SMIM10L2AP0DMW4 78 aa13.41□□□□□ -0.26
KCNIP3-201ENST00000295225 SMIM10L2BP0DMW5 78 aa13.41□□□□□ -0.26
KCNIP3-201ENST00000295225 NPR3P17342 541 aa13.41□□□□□ -0.26
KCNIP3-201ENST00000295225 TFEBP19484 476 aa13.41□□□□□ -0.26
KCNIP3-201ENST00000295225 KCNA5P22460 613 aa13.41□□□□□ -0.26
KCNIP3-201ENST00000295225 CES1P23141 567 aa13.41□□□□□ -0.26
KCNIP3-201ENST00000295225 CLCNKBP51801 687 aa13.41□□□□□ -0.26
KCNIP3-201ENST00000295225 CEACAM7Q14002 265 aa13.41□□□□□ -0.26
KCNIP3-201ENST00000295225 TRIM71Q2Q1W2 868 aaKnown RBP13.41□□□□□ -0.26
KCNIP3-201ENST00000295225 SDHAF4Q5VUM1 108 aa13.41□□□□□ -0.26
KCNIP3-201ENST00000295225 C9orf131Q5VYM1 1079 aa13.41□□□□□ -0.26
KCNIP3-201ENST00000295225 NOTUMQ6P988 496 aa13.41□□□□□ -0.26
KCNIP3-201ENST00000295225 EPGNQ6UW88 154 aa13.41□□□□□ -0.26
KCNIP3-201ENST00000295225 LILRA2Q8N149 483 aa13.41□□□□□ -0.26
KCNIP3-201ENST00000295225 C7orf57Q8NEG2 295 aa13.41□□□□□ -0.26
KCNIP3-201ENST00000295225 NPY6RQ99463 290 aa13.41□□□□□ -0.26
KCNIP3-201ENST00000295225 NFKBIZQ9BYH8 718 aa13.41□□□□□ -0.26
KCNIP3-201ENST00000295225 GCOM2Q9BZD3 368 aaPredicted RBP13.41□□□□□ -0.26
KCNIP3-201ENST00000295225 DDX18Q9NVP1 670 aaKnown RBP13.41□□□□□ -0.26
KCNIP3-201ENST00000295225 GTSE1Q9NYZ3 720 aa13.41□□□□□ -0.26
KCNIP3-201ENST00000295225 IPPQ9Y573 584 aa13.41□□□□□ -0.26
KCNIP3-201ENST00000295225 PIRO00625 290 aa13.4□□□□□ -0.26
KCNIP3-201ENST00000295225 TRIM13O60858 407 aa13.4□□□□□ -0.26
KCNIP3-201ENST00000295225 PMLP29590 882 aa13.4□□□□□ -0.26
KCNIP3-201ENST00000295225 SPRP35270 261 aaPredicted RBP13.4□□□□□ -0.26
KCNIP3-201ENST00000295225 TAF6P49848 677 aa13.4□□□□□ -0.26
KCNIP3-201ENST00000295225 LIMK2P53671 638 aa13.4□□□□□ -0.26
KCNIP3-201ENST00000295225 PDK3Q15120 406 aa13.4□□□□□ -0.26
KCNIP3-201ENST00000295225 SLC44A4Q53GD3 710 aa13.4□□□□□ -0.26
KCNIP3-201ENST00000295225 PGM2L1Q6PCE3 622 aa13.4□□□□□ -0.26
KCNIP3-201ENST00000295225 TMC7Q7Z402 723 aa13.4□□□□□ -0.26
KCNIP3-201ENST00000295225 LSMEM2Q8N112 164 aa13.4□□□□□ -0.26
KCNIP3-201ENST00000295225 ZMIZ2Q8NF64 920 aa13.4□□□□□ -0.26
KCNIP3-201ENST00000295225 OR9I1Q8NGQ6 314 aa13.4□□□□□ -0.26
KCNIP3-201ENST00000295225 WNT8BQ93098 351 aa13.4□□□□□ -0.26
KCNIP3-201ENST00000295225 CMTM5Q96DZ9 223 aa13.4□□□□□ -0.26
KCNIP3-201ENST00000295225 GAD1Q99259 594 aa13.4□□□□□ -0.26
KCNIP3-201ENST00000295225 SMOQ99835 787 aa13.4□□□□□ -0.26
KCNIP3-201ENST00000295225 BEGAINQ9BUH8 593 aa13.4□□□□□ -0.26
KCNIP3-201ENST00000295225 DUSP16Q9BY84 665 aa13.4□□□□□ -0.26
KCNIP3-201ENST00000295225 FRMD8Q9BZ67 464 aaPredicted RBP13.4□□□□□ -0.26
KCNIP3-201ENST00000295225 LRRC40Q9H9A6 602 aa13.4□□□□□ -0.26
KCNIP3-201ENST00000295225 IL1RL2Q9HB29 575 aa13.4□□□□□ -0.26
KCNIP3-201ENST00000295225 WDR6Q9NNW5 1121 aaKnown RBP13.4□□□□□ -0.26
KCNIP3-201ENST00000295225 POLMQ9NP87 494 aaPredicted RBP13.4□□□□□ -0.26
KCNIP3-201ENST00000295225 MIOSQ9NXC5 875 aa13.4□□□□□ -0.26
KCNIP3-201ENST00000295225 MPP6Q9NZW5 540 aa13.4□□□□□ -0.26
KCNIP3-201ENST00000295225 CPA4Q9UI42 421 aa13.4□□□□□ -0.26
KCNIP3-201ENST00000295225 PTGDR2Q9Y5Y4 395 aa13.4□□□□□ -0.26
KCNIP3-201ENST00000295225 LRRC72A6NJI9 287 aa13.4□□□□□ -0.26
KCNIP3-201ENST00000295225 PDHXO00330 501 aa13.4□□□□□ -0.26
KCNIP3-201ENST00000295225 ZNF16P17020 682 aaPredicted RBP13.4□□□□□ -0.26
KCNIP3-201ENST00000295225 ALDH1A3P47895 512 aa13.4□□□□□ -0.26
KCNIP3-201ENST00000295225 PTPRCAPQ14761 206 aa13.4□□□□□ -0.26
KCNIP3-201ENST00000295225 TAF1CQ15572 869 aaPredicted RBP13.4□□□□□ -0.26
KCNIP3-201ENST00000295225 ACTRT2Q8TDY3 377 aa13.4□□□□□ -0.26
KCNIP3-201ENST00000295225 DPF3Q92784 378 aa13.4□□□□□ -0.26
KCNIP3-201ENST00000295225 SLC10A4Q96EP9 437 aa13.4□□□□□ -0.26
KCNIP3-201ENST00000295225 ANKRD27Q96NW4 1050 aa13.4□□□□□ -0.26
KCNIP3-201ENST00000295225 RBM14Q96PK6 669 aaKnown RBP13.4□□□□□ -0.26
KCNIP3-201ENST00000295225 CPNE1Q99829 537 aa13.4□□□□□ -0.26
KCNIP3-201ENST00000295225 ADA2Q9NZK5 511 aa13.4□□□□□ -0.26
KCNIP3-201ENST00000295225 ARHGAP26Q9UNA1 814 aa13.4□□□□□ -0.26
KCNIP3-201ENST00000295225 PCDHB12Q9Y5F1 795 aa13.4□□□□□ -0.26
KCNIP3-201ENST00000295225 VCANP13611 3396 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms