RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 PRICKLE1Q96MT3 831 aaPredicted RBP12.53□□□□□ -0.4
SLX4-201ENST00000294008 CCT8L2Q96SF2 557 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 GANQ9H2C0 597 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 PLOD2O00469 737 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 CLOCKO15516 846 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 FBXO21O94952 628 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 RYKP34925 604 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 CBX3Q13185 183 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 PTGES3Q15185 160 aaKnown RBP12.53□□□□□ -0.4
SLX4-201ENST00000294008 PFKFB4Q16877 469 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 INO80DQ53TQ3 878 aaPredicted RBP12.53□□□□□ -0.4
SLX4-201ENST00000294008 SULT1C3Q6IMI6 304 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 KLHL35Q6PF15 583 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 OR2AJ1Q8NGZ0 328 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 MFSD3Q96ES6 412 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 MCCC1Q96RQ3 725 aaPredicted RBP12.53□□□□□ -0.4
SLX4-201ENST00000294008 ABCB10Q9NRK6 738 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 MTMR4Q9NYA4 1195 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 RDH8Q9NYR8 311 aa12.53□□□□□ -0.4
SLX4-201ENST00000294008 EPHB6O15197 1021 aa12.52□□□□□ -0.4
SLX4-201ENST00000294008 GAS2O43903 313 aaKnown RBP12.52□□□□□ -0.4
SLX4-201ENST00000294008 DGKAP23743 735 aa12.52□□□□□ -0.4
SLX4-201ENST00000294008 ACTR3P61158 418 aa12.52□□□□□ -0.4
SLX4-201ENST00000294008 ACAD10Q6JQN1 1059 aa12.52□□□□□ -0.4
SLX4-201ENST00000294008 REXO1L1PQ8IX06 675 aa12.52□□□□□ -0.4
SLX4-201ENST00000294008 LRRC17Q8N6Y2 441 aa12.52□□□□□ -0.4
SLX4-201ENST00000294008 SPERTQ8NA61 448 aa12.52□□□□□ -0.4
SLX4-201ENST00000294008 SLC38A3Q99624 504 aa12.52□□□□□ -0.4
SLX4-201ENST00000294008 ADAM2Q99965 735 aa12.52□□□□□ -0.4
SLX4-201ENST00000294008 ARHGEF33A8MVX0 844 aa12.52□□□□□ -0.4
SLX4-201ENST00000294008 SMAD9O15198 467 aaKnown RBP12.52□□□□□ -0.4
SLX4-201ENST00000294008 ABCG1P45844 678 aa12.52□□□□□ -0.4
SLX4-201ENST00000294008 ZNF792Q3KQV3 632 aa12.52□□□□□ -0.4
SLX4-201ENST00000294008 C1orf94Q6P1W5 598 aa12.52□□□□□ -0.4
SLX4-201ENST00000294008 METTL16Q86W50 562 aaKnown RBP12.52□□□□□ -0.4
SLX4-201ENST00000294008 VPS4AQ9UN37 437 aa12.52□□□□□ -0.4
SLX4-201ENST00000294008 MRPS33Q9Y291 106 aaKnown RBP12.52□□□□□ -0.4
SLX4-201ENST00000294008 MAP3K1Q13233 1512 aa12.52□□□□□ -0.41
SLX4-201ENST00000294008 MDFIC2A0A1B0GVS7 189 aa12.52□□□□□ -0.41
SLX4-201ENST00000294008 ZBTB11O95625 1053 aaPredicted RBP12.52□□□□□ -0.41
SLX4-201ENST00000294008 ALPPL2P10696 532 aa12.52□□□□□ -0.41
SLX4-201ENST00000294008 UQCRC1P31930 480 aa12.52□□□□□ -0.41
SLX4-201ENST00000294008 IL18R1Q13478 541 aa12.52□□□□□ -0.41
SLX4-201ENST00000294008 C9orf64Q5T6V5 341 aa12.52□□□□□ -0.41
SLX4-201ENST00000294008 MAB21L3Q8N8X9 362 aa12.52□□□□□ -0.41
SLX4-201ENST00000294008 BOLLQ8N9W6 283 aaKnown RBP12.52□□□□□ -0.41
SLX4-201ENST00000294008 HIC2Q96JB3 615 aa12.52□□□□□ -0.41
SLX4-201ENST00000294008 CHP1Q99653 195 aa12.52□□□□□ -0.41
SLX4-201ENST00000294008 ABCB9Q9NP78 766 aa12.52□□□□□ -0.41
SLX4-201ENST00000294008 HIF3AQ9Y2N7 669 aa12.52□□□□□ -0.41
SLX4-201ENST00000294008 A8MUA0 341 aa12.52□□□□□ -0.41
SLX4-201ENST00000294008 PDE2AO00408 941 aaPredicted RBP12.52□□□□□ -0.41
SLX4-201ENST00000294008 PGRMC2O15173 223 aa12.52□□□□□ -0.41
SLX4-201ENST00000294008 SLC25A14O95258 325 aaPredicted RBP12.52□□□□□ -0.41
SLX4-201ENST00000294008 IFNGP01579 166 aa12.52□□□□□ -0.41
SLX4-201ENST00000294008 NFKB2Q00653 900 aa12.52□□□□□ -0.41
SLX4-201ENST00000294008 SPIRE1Q08AE8 756 aa12.52□□□□□ -0.41
SLX4-201ENST00000294008 RBM39Q14498 530 aaKnown RBP12.52□□□□□ -0.41
SLX4-201ENST00000294008 FBXO47Q5MNV8 452 aa12.52□□□□□ -0.41
SLX4-201ENST00000294008 CLEC4GQ6UXB4 293 aa12.52□□□□□ -0.41
SLX4-201ENST00000294008 OR5M3Q8NGP4 307 aa12.52□□□□□ -0.41
SLX4-201ENST00000294008 SMARCD1Q96GM5 515 aa12.52□□□□□ -0.41
SLX4-201ENST00000294008 SPATA5L1Q9BVQ7 753 aa12.52□□□□□ -0.41
SLX4-201ENST00000294008 COPS7AQ9UBW8 275 aa12.52□□□□□ -0.41
SLX4-201ENST00000294008 ATP10AO60312 1499 aa12.52□□□□□ -0.41
SLX4-201ENST00000294008 MAGEA13PA6NCF6 341 aa12.52□□□□□ -0.41
SLX4-201ENST00000294008 FAM86B1E9PN63 330 aa12.52□□□□□ -0.41
SLX4-201ENST00000294008 TRIM66O15016 1216 aa12.52□□□□□ -0.41
SLX4-201ENST00000294008 MMP13P45452 471 aa12.52□□□□□ -0.41
SLX4-201ENST00000294008 SLC12A3P55017 1021 aa12.52□□□□□ -0.41
SLX4-201ENST00000294008 BNIP3Q12983 259 aa12.52□□□□□ -0.41
SLX4-201ENST00000294008 RPRD2Q5VT52 1461 aaKnown RBP12.52□□□□□ -0.41
SLX4-201ENST00000294008 SLC8B1Q6J4K2 584 aa12.52□□□□□ -0.41
SLX4-201ENST00000294008 TRMT10AQ8TBZ6 339 aaKnown RBP12.52□□□□□ -0.41
SLX4-201ENST00000294008 THAP2Q9H0W7 228 aa12.52□□□□□ -0.41
SLX4-201ENST00000294008 APODP05090 189 aa12.52□□□□□ -0.41
SLX4-201ENST00000294008 PRKCHP24723 683 aa12.52□□□□□ -0.41
SLX4-201ENST00000294008 NR0B1P51843 470 aaKnown RBP12.52□□□□□ -0.41
SLX4-201ENST00000294008 FOXRED2Q8IWF2 684 aa12.52□□□□□ -0.41
SLX4-201ENST00000294008 SYNPOQ8N3V7 929 aa12.52□□□□□ -0.41
SLX4-201ENST00000294008 ZSCAN1Q8NBB4 408 aa12.52□□□□□ -0.41
SLX4-201ENST00000294008 SETD9Q8NE22 299 aa12.52□□□□□ -0.41
SLX4-201ENST00000294008 BRD7Q9NPI1 651 aa12.52□□□□□ -0.41
SLX4-201ENST00000294008 FBXO28Q9NVF7 368 aa12.52□□□□□ -0.41
SLX4-201ENST00000294008 GNPTGQ9UJJ9 305 aa12.52□□□□□ -0.41
SLX4-201ENST00000294008 MROH7Q68CQ1 1323 aa12.51□□□□□ -0.41
SLX4-201ENST00000294008 MANFP55145 182 aaKnown RBP12.51□□□□□ -0.41
SLX4-201ENST00000294008 BDH1Q02338 343 aa12.51□□□□□ -0.41
SLX4-201ENST00000294008 PEX6Q13608 980 aa12.51□□□□□ -0.41
SLX4-201ENST00000294008 SLC18A3Q16572 532 aa12.51□□□□□ -0.41
SLX4-201ENST00000294008 RNF43Q68DV7 783 aa12.51□□□□□ -0.41
SLX4-201ENST00000294008 ZBTB46Q86UZ6 589 aa12.51□□□□□ -0.41
SLX4-201ENST00000294008 ZDHHC13Q8IUH4 622 aa12.51□□□□□ -0.41
SLX4-201ENST00000294008 CDHR5Q9HBB8 845 aa12.51□□□□□ -0.41
SLX4-201ENST00000294008 ADARB2Q9NS39 739 aaKnown RBP12.51□□□□□ -0.41
SLX4-201ENST00000294008 RBM12Q9NTZ6 932 aaKnown RBP12.51□□□□□ -0.41
SLX4-201ENST00000294008 AGPAT5Q9NUQ2 364 aa12.51□□□□□ -0.41
SLX4-201ENST00000294008 CNOT6Q9ULM6 557 aaKnown RBP12.51□□□□□ -0.41
SLX4-201ENST00000294008 RASA2Q15283 850 aa12.51□□□□□ -0.41
SLX4-201ENST00000294008 NRF1Q16656 503 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms