RNA–Protein interactions for RNA: ENST00000293845.7

CCDC42-201, Transcript of coiled-coil domain containing 42, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC42, Length 1,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-201ENST00000293845 MMP2P08253 660 aa13.37□□□□□ -0.27
CCDC42-201ENST00000293845 SERPINF2P08697 491 aa13.37□□□□□ -0.27
CCDC42-201ENST00000293845 OXTRP30559 389 aa13.37□□□□□ -0.27
CCDC42-201ENST00000293845 CNR2P34972 360 aa13.37□□□□□ -0.27
CCDC42-201ENST00000293845 CNTN1Q12860 1018 aa13.37□□□□□ -0.27
CCDC42-201ENST00000293845 TCF15Q12870 199 aa13.37□□□□□ -0.27
CCDC42-201ENST00000293845 TRAF2Q12933 501 aa13.37□□□□□ -0.27
CCDC42-201ENST00000293845 SNX1Q13596 522 aa13.37□□□□□ -0.27
CCDC42-201ENST00000293845 IHHQ14623 411 aa13.37□□□□□ -0.27
CCDC42-201ENST00000293845 P3H1Q32P28 736 aa13.37□□□□□ -0.27
CCDC42-201ENST00000293845 USP39Q53GS9 565 aaKnown RBP13.37□□□□□ -0.27
CCDC42-201ENST00000293845 ANKRD20A2Q5SQ80 823 aa13.37□□□□□ -0.27
CCDC42-201ENST00000293845 ANKRD20A1Q5TYW2 823 aa13.37□□□□□ -0.27
CCDC42-201ENST00000293845 AGBL4Q5VU57 503 aa13.37□□□□□ -0.27
CCDC42-201ENST00000293845 ANKRD20A3Q5VUR7 823 aa13.37□□□□□ -0.27
CCDC42-201ENST00000293845 ITPRIPL1Q6GPH6 555 aa13.37□□□□□ -0.27
CCDC42-201ENST00000293845 ERN2Q76MJ5 926 aaKnown RBP13.37□□□□□ -0.27
CCDC42-201ENST00000293845 PARS2Q7L3T8 475 aaKnown RBP13.37□□□□□ -0.27
CCDC42-201ENST00000293845 CAMK1DQ8IU85 385 aa13.37□□□□□ -0.27
CCDC42-201ENST00000293845 FAM71DQ8N9W8 422 aa13.37□□□□□ -0.27
CCDC42-201ENST00000293845 PRSS33Q8NF86 280 aa13.37□□□□□ -0.27
CCDC42-201ENST00000293845 CAPZA3Q96KX2 299 aa13.37□□□□□ -0.27
CCDC42-201ENST00000293845 KLHL32Q96NJ5 620 aa13.37□□□□□ -0.27
CCDC42-201ENST00000293845 FCRL5Q96RD9 977 aa13.37□□□□□ -0.27
CCDC42-201ENST00000293845 AP1M1Q9BXS5 423 aa13.37□□□□□ -0.27
CCDC42-201ENST00000293845 GBA3Q9H227 469 aa13.37□□□□□ -0.27
CCDC42-201ENST00000293845 DYRK4Q9NR20 520 aa13.37□□□□□ -0.27
CCDC42-201ENST00000293845 SERGEFQ9UGK8 458 aa13.37□□□□□ -0.27
CCDC42-201ENST00000293845 ZNF148Q9UQR1 794 aa13.37□□□□□ -0.27
CCDC42-201ENST00000293845 NCKAP1Q9Y2A7 1128 aa13.37□□□□□ -0.27
CCDC42-201ENST00000293845 LRRK1Q38SD2 2015 aa13.37□□□□□ -0.27
CCDC42-201ENST00000293845 TNRC6BQ9UPQ9 1833 aaKnown RBP13.36□□□□□ -0.27
CCDC42-201ENST00000293845 IGHV1OR15-9A0A0B4J2B8 117 aa13.36□□□□□ -0.27
CCDC42-201ENST00000293845 PDE2AO00408 941 aaPredicted RBP13.36□□□□□ -0.27
CCDC42-201ENST00000293845 FZD6O60353 706 aa13.36□□□□□ -0.27
CCDC42-201ENST00000293845 PHF2O75151 1096 aa13.36□□□□□ -0.27
CCDC42-201ENST00000293845 NFKB1P19838 968 aa13.36□□□□□ -0.27
CCDC42-201ENST00000293845 PAFAH1B1P43034 410 aa13.36□□□□□ -0.27
CCDC42-201ENST00000293845 FNTAP49354 379 aa13.36□□□□□ -0.27
CCDC42-201ENST00000293845 SUOXP51687 545 aa13.36□□□□□ -0.27
CCDC42-201ENST00000293845 NEK3P51956 506 aa13.36□□□□□ -0.27
CCDC42-201ENST00000293845 SKOR1P84550 965 aa13.36□□□□□ -0.27
CCDC42-201ENST00000293845 CCDC15Q0P6D6 951 aa13.36□□□□□ -0.27
CCDC42-201ENST00000293845 POM121L1PQ3SYA9 428 aa13.36□□□□□ -0.27
CCDC42-201ENST00000293845 FAM182AQ5T1J6 154 aa13.36□□□□□ -0.27
CCDC42-201ENST00000293845 PIP5KL1Q5T9C9 394 aa13.36□□□□□ -0.27
CCDC42-201ENST00000293845 BRAT1Q6PJG6 821 aa13.36□□□□□ -0.27
CCDC42-201ENST00000293845 PRPF39Q86UA1 669 aaKnown RBP13.36□□□□□ -0.27
CCDC42-201ENST00000293845 C11orf74Q86VG3 221 aa13.36□□□□□ -0.27
CCDC42-201ENST00000293845 KLHDC8BQ8IXV7 354 aa13.36□□□□□ -0.27
CCDC42-201ENST00000293845 HDDC3Q8N4P3 179 aa13.36□□□□□ -0.27
CCDC42-201ENST00000293845 CCDC110Q8TBZ0 833 aa13.36□□□□□ -0.27
CCDC42-201ENST00000293845 GAB3Q8WWW8 586 aa13.36□□□□□ -0.27
CCDC42-201ENST00000293845 MAGOHBQ96A72 148 aaKnown RBP13.36□□□□□ -0.27
CCDC42-201ENST00000293845 SPACA7Q96KW9 195 aa13.36□□□□□ -0.27
CCDC42-201ENST00000293845 OMDQ99983 421 aa13.36□□□□□ -0.27
CCDC42-201ENST00000293845 TDRD1Q9BXT4 1180 aaKnown RBP13.36□□□□□ -0.27
CCDC42-201ENST00000293845 SGK2Q9HBY8 427 aa13.36□□□□□ -0.27
CCDC42-201ENST00000293845 VPS45Q9NRW7 570 aa13.36□□□□□ -0.27
CCDC42-201ENST00000293845 RSPH14Q9UHP6 348 aa13.36□□□□□ -0.27
CCDC42-201ENST00000293845 CYP8B1Q9UNU6 501 aa13.36□□□□□ -0.27
CCDC42-201ENST00000293845 PCDHGC4Q9Y5F7 938 aa13.36□□□□□ -0.27
CCDC42-201ENST00000293845 C16orf96A6NNT2 1141 aa13.35□□□□□ -0.27
CCDC42-201ENST00000293845 C10orf142B7Z368 130 aa13.35□□□□□ -0.27
CCDC42-201ENST00000293845 PLRG1O43660 514 aaKnown RBP13.35□□□□□ -0.27
CCDC42-201ENST00000293845 RNASEH2AO75792 299 aaKnown RBP13.35□□□□□ -0.27
CCDC42-201ENST00000293845 ADRB3P13945 408 aa13.35□□□□□ -0.27
CCDC42-201ENST00000293845 CA4P22748 312 aa13.35□□□□□ -0.27
CCDC42-201ENST00000293845 CD6P30203 668 aa13.35□□□□□ -0.27
CCDC42-201ENST00000293845 DEKP35659 375 aaKnown RBP13.35□□□□□ -0.27
CCDC42-201ENST00000293845 COILP38432 576 aaPredicted RBP13.35□□□□□ -0.27
CCDC42-201ENST00000293845 CD86P42081 329 aa13.35□□□□□ -0.27
CCDC42-201ENST00000293845 KCNJ1P48048 391 aa13.35□□□□□ -0.27
CCDC42-201ENST00000293845 ADPRHP54922 357 aa13.35□□□□□ -0.27
CCDC42-201ENST00000293845 LMNB2Q03252 620 aa13.35□□□□□ -0.27
CCDC42-201ENST00000293845 TTC27Q6P3X3 843 aa13.35□□□□□ -0.27
CCDC42-201ENST00000293845 ZSWIM9Q86XI8 627 aa13.35□□□□□ -0.27
CCDC42-201ENST00000293845 ATL2Q8NHH9 583 aa13.35□□□□□ -0.27
CCDC42-201ENST00000293845 RLN3Q8WXF3 142 aa13.35□□□□□ -0.27
CCDC42-201ENST00000293845 RAB7BQ96AH8 199 aa13.35□□□□□ -0.27
CCDC42-201ENST00000293845 PPP1R2P1Q96PQ5 205 aa13.35□□□□□ -0.27
CCDC42-201ENST00000293845 BTBD1Q9H0C5 482 aa13.35□□□□□ -0.27
CCDC42-201ENST00000293845 IRF2BPLQ9H1B7 796 aa13.35□□□□□ -0.27
CCDC42-201ENST00000293845 NEUROG2Q9H2A3 272 aa13.35□□□□□ -0.27
CCDC42-201ENST00000293845 WSB2Q9NYS7 404 aaPredicted RBP13.35□□□□□ -0.27
CCDC42-201ENST00000293845 RAI2Q9Y5P3 530 aa13.35□□□□□ -0.27
CCDC42-201ENST00000293845 GON4LQ3T8J9 2241 aa13.35□□□□□ -0.27
CCDC42-201ENST00000293845 UPK3BL1B0FP48 263 aa13.34□□□□□ -0.27
CCDC42-201ENST00000293845 UPK3BL2E5RIL1 263 aa13.34□□□□□ -0.27
CCDC42-201ENST00000293845 H0Y858 1186 aa13.34□□□□□ -0.27
CCDC42-201ENST00000293845 CCDC188H7C350 402 aa13.34□□□□□ -0.27
CCDC42-201ENST00000293845 PLK4O00444 970 aa13.34□□□□□ -0.27
CCDC42-201ENST00000293845 AP1G1O43747 822 aa13.34□□□□□ -0.27
CCDC42-201ENST00000293845 RPP40O75818 363 aaKnown RBP13.34□□□□□ -0.27
CCDC42-201ENST00000293845 PGLSO95336 258 aa13.34□□□□□ -0.27
CCDC42-201ENST00000293845 MT-CYBP00156 380 aaPredicted RBP13.34□□□□□ -0.27
CCDC42-201ENST00000293845 PSMB4P28070 264 aa13.34□□□□□ -0.27
CCDC42-201ENST00000293845 ACSL1P33121 698 aa13.34□□□□□ -0.27
CCDC42-201ENST00000293845 ABL2P42684 1182 aa13.34□□□□□ -0.27
CCDC42-201ENST00000293845 PTPN5P54829 565 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms