RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 PCDHA3Q9Y5H8 950 aa6.61□□□□□ -1.35
CD44-204ENST00000279452 ATG2BQ96BY7 2078 aa6.61□□□□□ -1.35
CD44-204ENST00000279452 A0A1B0GTW7 788 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.6□□□□□ -1.35
CD44-204ENST00000279452 GOLGA8CPA6NN73 597 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 A8MX80 341 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 UPK3BL1B0FP48 263 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 PRR5-ARHGAP8B1AHC4 643 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 UPK3BL2E5RIL1 263 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 F5H423 210 aaPredicted RBP6.6□□□□□ -1.35
CD44-204ENST00000279452 MATN3O15232 486 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 SLC31A1O15431 190 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 ZSCAN12O43309 604 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 FOXD2O60548 495 aaPredicted RBP6.6□□□□□ -1.35
CD44-204ENST00000279452 LRP3O75074 770 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 TJP3O95049 919 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 CPP00450 1065 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 JCHAINP01591 159 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 PRKCGP05129 697 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 HLA-DQB2P05538 268 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 IGHV4-34P06331 123 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 ZNF806P0C7X5 589 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 PYGMP11217 842 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 ENGP17813 658 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 CA4P22748 312 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 CCNCP24863 283 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 CD27P26842 260 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 AKT2P31751 481 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 HOXD12P35452 270 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 ABL2P42684 1182 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 TNNT3P45378 269 aaPredicted RBP6.6□□□□□ -1.35
CD44-204ENST00000279452 NR2C2P49116 596 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 EPHB1P54762 984 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 TAS2R38P59533 333 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 COPS2P61201 443 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 IRX4P78413 519 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 OTUD4Q01804 1114 aaKnown RBP6.6□□□□□ -1.35
CD44-204ENST00000279452 SEMG2Q02383 582 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 DSC2Q02487 901 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 PPIDQ08752 370 aaKnown RBP6.6□□□□□ -1.35
CD44-204ENST00000279452 SLC10A2Q12908 348 aaPredicted RBP6.6□□□□□ -1.35
CD44-204ENST00000279452 ZBTB17Q13105 803 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 SGCGQ13326 291 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 HNRNPDQ14103 355 aaKnown RBP6.6□□□□□ -1.35
CD44-204ENST00000279452 STAT4Q14765 748 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 RPS6KA1Q15418 735 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 PPP2R5EQ16537 467 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 UAP1L1Q3KQV9 507 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 SLC45A4Q5BKX6 768 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 FAM182AQ5T1J6 154 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 SEL1L3Q68CR1 1132 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 DENND2CQ68D51 928 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 KIAA1161Q6NSJ0 714 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 BRAT1Q6PJG6 821 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 VSIG1Q86XK7 387 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 PLPP6Q8IY26 295 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 PGBD5Q8N414 524 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 CEP76Q8TAP6 659 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 ALG3Q92685 438 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 SKA1Q96BD8 255 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 ZNF641Q96N77 438 aaPredicted RBP6.6□□□□□ -1.35
CD44-204ENST00000279452 AGAP3Q96P47 875 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 NUDCD1Q96RS6 583 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 SEMA3CQ99985 751 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 FAM118BQ9BPY3 351 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 FERMT1Q9BQL6 677 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 MGME1Q9BQP7 344 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 CPEB1Q9BZB8 566 aaKnown RBP6.6□□□□□ -1.35
CD44-204ENST00000279452 OSBPL8Q9BZF1 889 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 KDM4CQ9H3R0 1056 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 NOD2Q9HC29 1040 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 PREBQ9HCU5 417 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 TM9SF3Q9HD45 589 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 FZD3Q9NPG1 666 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 TRMT1Q9NXH9 659 aaKnown RBP6.6□□□□□ -1.35
CD44-204ENST00000279452 KLHL8Q9P2G9 620 aaPredicted RBP6.6□□□□□ -1.35
CD44-204ENST00000279452 GGT7Q9UJ14 662 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 SLC6A14Q9UN76 642 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 PCDHGC4Q9Y5F7 938 aa6.6□□□□□ -1.35
CD44-204ENST00000279452 NYNRINQ9P2P1 1898 aaKnown RBP6.6□□□□□ -1.35
CD44-204ENST00000279452 A0A1B0GVT2 93 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 A0A1W2PPC4 97 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 LNP1A1A4G5 178 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 GOLGA6CA6NDK9 693 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 GOLGA6BA6NDN3 693 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 APOC4-APOC2K7ER74 178 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 KCNK3O14649 394 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 DDX3YO15523 660 aaKnown RBP6.59□□□□□ -1.35
CD44-204ENST00000279452 TSPAN6O43657 245 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 LZTS3O60299 673 aaPredicted RBP6.59□□□□□ -1.35
CD44-204ENST00000279452 GDF9O60383 454 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 MMP20O60882 483 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 STK10O94804 968 aaKnown RBP6.59□□□□□ -1.35
CD44-204ENST00000279452 PEX11BO96011 259 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 APOC2P02655 101 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 SLC4A1P02730 911 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 SYPP08247 313 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 SERPINF2P08697 491 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 GOLGA6DP0CG33 693 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 ITIH2P19823 946 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms