RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 MMP8P22894 467 aa9.09□□□□□ -0.95
TPM3-201ENST00000271850 ADRA1BP35368 520 aa9.09□□□□□ -0.95
TPM3-201ENST00000271850 JAM2P57087 298 aa9.09□□□□□ -0.95
TPM3-201ENST00000271850 RPS21P63220 83 aaKnown RBP9.09□□□□□ -0.95
TPM3-201ENST00000271850 CXADRP78310 365 aa9.09□□□□□ -0.95
TPM3-201ENST00000271850 GABREP78334 506 aa9.09□□□□□ -0.95
TPM3-201ENST00000271850 E2F1Q01094 437 aa9.09□□□□□ -0.95
TPM3-201ENST00000271850 PDE1CQ14123 709 aaPredicted RBP9.09□□□□□ -0.95
TPM3-201ENST00000271850 BECN1Q14457 450 aa9.09□□□□□ -0.95
TPM3-201ENST00000271850 CDKN3Q16667 212 aa9.09□□□□□ -0.95
TPM3-201ENST00000271850 CDO1Q16878 200 aa9.09□□□□□ -0.95
TPM3-201ENST00000271850 ISXQ2M1V0 245 aa9.09□□□□□ -0.95
TPM3-201ENST00000271850 DEFB133Q30KQ1 61 aa9.09□□□□□ -0.95
TPM3-201ENST00000271850 LRRC31Q6UY01 552 aa9.09□□□□□ -0.95
TPM3-201ENST00000271850 PARGQ86W56 976 aa9.09□□□□□ -0.95
TPM3-201ENST00000271850 SLC35F3Q8IY50 421 aa9.09□□□□□ -0.95
TPM3-201ENST00000271850 TP53I13Q8NBR0 393 aaPredicted RBP9.09□□□□□ -0.95
TPM3-201ENST00000271850 SLC30A5Q8TAD4 765 aa9.09□□□□□ -0.95
TPM3-201ENST00000271850 CCDC114Q96M63 670 aa9.09□□□□□ -0.95
TPM3-201ENST00000271850 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.09□□□□□ -0.95
TPM3-201ENST00000271850 LRRC61Q9BV99 259 aa9.09□□□□□ -0.95
TPM3-201ENST00000271850 BOCQ9BWV1 1114 aa9.09□□□□□ -0.95
TPM3-201ENST00000271850 STK33Q9BYT3 514 aa9.09□□□□□ -0.95
TPM3-201ENST00000271850 CLPBQ9H078 707 aa9.09□□□□□ -0.95
TPM3-201ENST00000271850 OSBPL2Q9H1P3 480 aa9.09□□□□□ -0.95
TPM3-201ENST00000271850 CLSTN2Q9H4D0 955 aa9.09□□□□□ -0.95
TPM3-201ENST00000271850 DYRK4Q9NR20 520 aa9.09□□□□□ -0.95
TPM3-201ENST00000271850 TMEM248Q9NWD8 314 aa9.09□□□□□ -0.95
TPM3-201ENST00000271850 DNAI1Q9UI46 699 aa9.09□□□□□ -0.95
TPM3-201ENST00000271850 ENTPD2Q9Y5L3 495 aa9.09□□□□□ -0.95
TPM3-201ENST00000271850 COL6A6A6NMZ7 2263 aa9.08□□□□□ -0.96
TPM3-201ENST00000271850 EME2A4GXA9 379 aaPredicted RBP9.08□□□□□ -0.96
TPM3-201ENST00000271850 CYSRT1A8MQ03 144 aa9.08□□□□□ -0.96
TPM3-201ENST00000271850 RRP8O43159 456 aaKnown RBP9.08□□□□□ -0.96
TPM3-201ENST00000271850 AQP9O43315 295 aa9.08□□□□□ -0.96
TPM3-201ENST00000271850 UGT2B4P06133 528 aa9.08□□□□□ -0.96
TPM3-201ENST00000271850 UNGP13051 313 aaPredicted RBP9.08□□□□□ -0.96
TPM3-201ENST00000271850 ACTN2P35609 894 aa9.08□□□□□ -0.96
TPM3-201ENST00000271850 RABIFP47224 123 aa9.08□□□□□ -0.96
TPM3-201ENST00000271850 LSSP48449 732 aa9.08□□□□□ -0.96
TPM3-201ENST00000271850 DNA2P51530 1060 aa9.08□□□□□ -0.96
TPM3-201ENST00000271850 BPIFB4P59827 614 aa9.08□□□□□ -0.96
TPM3-201ENST00000271850 HNRNPKP61978 463 aaKnown RBP eCLIP9.08□□□□□ -0.96
TPM3-201ENST00000271850 C1orf61Q13536 156 aa9.08□□□□□ -0.96
TPM3-201ENST00000271850 ZNF805Q5CZA5 627 aa9.08□□□□□ -0.96
TPM3-201ENST00000271850 RETSATQ6NUM9 610 aa9.08□□□□□ -0.96
TPM3-201ENST00000271850 LRRC69Q6ZNQ3 347 aa9.08□□□□□ -0.96
TPM3-201ENST00000271850 EFL1Q7Z2Z2 1120 aaKnown RBP9.08□□□□□ -0.96
TPM3-201ENST00000271850 GPR155Q7Z3F1 870 aa9.08□□□□□ -0.96
TPM3-201ENST00000271850 ZSWIM9Q86XI8 627 aa9.08□□□□□ -0.96
TPM3-201ENST00000271850 OR2AP1Q8NGE2 309 aa9.08□□□□□ -0.96
TPM3-201ENST00000271850 TTC9Q92623 222 aa9.08□□□□□ -0.96
TPM3-201ENST00000271850 ISG20Q96AZ6 181 aaKnown RBP9.08□□□□□ -0.96
TPM3-201ENST00000271850 ATXN7L3BQ96GX2 97 aa9.08□□□□□ -0.96
TPM3-201ENST00000271850 PPP1R16AQ96I34 528 aa9.08□□□□□ -0.96
TPM3-201ENST00000271850 NSMCE3Q96MG7 304 aa9.08□□□□□ -0.96
TPM3-201ENST00000271850 ZNF578Q96N58 590 aaPredicted RBP9.08□□□□□ -0.96
TPM3-201ENST00000271850 KLHL32Q96NJ5 620 aa9.08□□□□□ -0.96
TPM3-201ENST00000271850 C11orf70Q9BRQ4 267 aa9.08□□□□□ -0.96
TPM3-201ENST00000271850 POLR1BQ9H9Y6 1135 aa9.08□□□□□ -0.96
TPM3-201ENST00000271850 TAB2Q9NYJ8 693 aa9.08□□□□□ -0.96
TPM3-201ENST00000271850 OR12D3Q9UGF7 316 aa9.08□□□□□ -0.96
TPM3-201ENST00000271850 SATB2Q9UPW6 733 aa9.08□□□□□ -0.96
TPM3-201ENST00000271850 PIEZO2Q9H5I5 2752 aa9.08□□□□□ -0.96
TPM3-201ENST00000271850 AHCTF1Q8WYP5 2266 aa9.07□□□□□ -0.96
TPM3-201ENST00000271850 CXorf51AA0A1B0GTR3 108 aa9.07□□□□□ -0.96
TPM3-201ENST00000271850 TEX51A0A1B0GUA7 166 aa9.07□□□□□ -0.96
TPM3-201ENST00000271850 CDRT15L2A8MXV6 281 aa9.07□□□□□ -0.96
TPM3-201ENST00000271850 MMP20O60882 483 aa9.07□□□□□ -0.96
TPM3-201ENST00000271850 GFPT2O94808 682 aa9.07□□□□□ -0.96
TPM3-201ENST00000271850 TMCC1O94876 653 aa9.07□□□□□ -0.96
TPM3-201ENST00000271850 GSRP00390 522 aa9.07□□□□□ -0.96
TPM3-201ENST00000271850 KRT10P13645 584 aa9.07□□□□□ -0.96
TPM3-201ENST00000271850 TIMP2P16035 220 aa9.07□□□□□ -0.96
TPM3-201ENST00000271850 RHOQP17081 205 aa9.07□□□□□ -0.96
TPM3-201ENST00000271850 JUNDP17535 347 aa9.07□□□□□ -0.96
TPM3-201ENST00000271850 ERCC5P28715 1186 aaPredicted RBP9.07□□□□□ -0.96
TPM3-201ENST00000271850 PTPN9P43378 593 aa9.07□□□□□ -0.96
TPM3-201ENST00000271850 RECQLP46063 649 aaPredicted RBP9.07□□□□□ -0.96
TPM3-201ENST00000271850 MAPKAPK2P49137 400 aa9.07□□□□□ -0.96
TPM3-201ENST00000271850 GSCP56915 257 aaPredicted RBP9.07□□□□□ -0.96
TPM3-201ENST00000271850 PCBP4P57723 403 aaKnown RBP9.07□□□□□ -0.96
TPM3-201ENST00000271850 SNX16P57768 344 aa9.07□□□□□ -0.96
TPM3-201ENST00000271850 CDR2Q01850 454 aa9.07□□□□□ -0.96
TPM3-201ENST00000271850 SLC20A2Q08357 652 aa9.07□□□□□ -0.96
TPM3-201ENST00000271850 MYLK3Q32MK0 819 aa9.07□□□□□ -0.96
TPM3-201ENST00000271850 TCP11X2Q5H9J9 407 aa9.07□□□□□ -0.96
TPM3-201ENST00000271850 C3orf38Q5JPI3 329 aa9.07□□□□□ -0.96
TPM3-201ENST00000271850 CDKAL1Q5VV42 579 aa9.07□□□□□ -0.96
TPM3-201ENST00000271850 ZCCHC8Q6NZY4 707 aaKnown RBP9.07□□□□□ -0.96
TPM3-201ENST00000271850 IGF2-ASQ6U949 168 aa9.07□□□□□ -0.96
TPM3-201ENST00000271850 B3GNT8Q7Z7M8 397 aa9.07□□□□□ -0.96
TPM3-201ENST00000271850 DCP2Q8IU60 420 aaKnown RBP9.07□□□□□ -0.96
TPM3-201ENST00000271850 SFTPA2Q8IWL1 248 aa9.07□□□□□ -0.96
TPM3-201ENST00000271850 ZNF248Q8NDW4 579 aa9.07□□□□□ -0.96
TPM3-201ENST00000271850 DENND6BQ8NEG7 585 aa9.07□□□□□ -0.96
TPM3-201ENST00000271850 MAPK15Q8TD08 544 aa9.07□□□□□ -0.96
TPM3-201ENST00000271850 LMX1AQ8TE12 382 aa9.07□□□□□ -0.96
TPM3-201ENST00000271850 FAM172AQ8WUF8 416 aa9.07□□□□□ -0.96
TPM3-201ENST00000271850 SNRNP27Q8WVK2 155 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms