RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 YAP1P46937 504 aaKnown RBP13.24□□□□□ -0.29
NUP54-201ENST00000264883 HK2P52789 917 aa13.24□□□□□ -0.29
NUP54-201ENST00000264883 SNX16P57768 344 aa13.24□□□□□ -0.29
NUP54-201ENST00000264883 NIPAL4Q0D2K0 466 aa13.24□□□□□ -0.29
NUP54-201ENST00000264883 RALGDSQ12967 914 aa13.24□□□□□ -0.29
NUP54-201ENST00000264883 MAPRE1Q15691 268 aaKnown RBP13.24□□□□□ -0.29
NUP54-201ENST00000264883 STXBP2Q15833 593 aa13.24□□□□□ -0.29
NUP54-201ENST00000264883 TREML2Q5T2D2 321 aa13.24□□□□□ -0.29
NUP54-201ENST00000264883 GADL1Q6ZQY3 521 aa13.24□□□□□ -0.29
NUP54-201ENST00000264883 ZNF534Q76KX8 674 aa13.24□□□□□ -0.29
NUP54-201ENST00000264883 PRRT2Q7Z6L0 340 aaPredicted RBP13.24□□□□□ -0.29
NUP54-201ENST00000264883 C11orf74Q86VG3 221 aa13.24□□□□□ -0.29
NUP54-201ENST00000264883 KIAA2013Q8IYS2 634 aa13.24□□□□□ -0.29
NUP54-201ENST00000264883 TTC30BQ8N4P2 665 aa13.24□□□□□ -0.29
NUP54-201ENST00000264883 PQLC3Q8N755 202 aa13.24□□□□□ -0.29
NUP54-201ENST00000264883 BPIFB6Q8NFQ5 453 aa13.24□□□□□ -0.29
NUP54-201ENST00000264883 RXFP2Q8WXD0 754 aa13.24□□□□□ -0.29
NUP54-201ENST00000264883 SNX19Q92543 992 aa13.24□□□□□ -0.29
NUP54-201ENST00000264883 SEPT8Q92599 483 aa13.24□□□□□ -0.29
NUP54-201ENST00000264883 ZNF486Q96H40 463 aaPredicted RBP13.24□□□□□ -0.29
NUP54-201ENST00000264883 UNC93B1Q9H1C4 597 aa13.24□□□□□ -0.29
NUP54-201ENST00000264883 TP63Q9H3D4 680 aaPredicted RBP13.24□□□□□ -0.29
NUP54-201ENST00000264883 ELP3Q9H9T3 547 aa13.24□□□□□ -0.29
NUP54-201ENST00000264883 CD320Q9NPF0 282 aa13.24□□□□□ -0.29
NUP54-201ENST00000264883 GDAP2Q9NXN4 497 aa13.24□□□□□ -0.29
NUP54-201ENST00000264883 HOXC10Q9NYD6 342 aa13.24□□□□□ -0.29
NUP54-201ENST00000264883 KLQ9UEF7 1012 aa13.24□□□□□ -0.29
NUP54-201ENST00000264883 SFMBT1Q9UHJ3 866 aa13.24□□□□□ -0.29
NUP54-201ENST00000264883 CDYLQ9Y232 598 aa13.24□□□□□ -0.29
NUP54-201ENST00000264883 RNF103-CHMP3A0A140T963 221 aa13.24□□□□□ -0.29
NUP54-201ENST00000264883 DYTNA2CJ06 578 aa13.24□□□□□ -0.29
NUP54-201ENST00000264883 KCNU1A8MYU2 1149 aa13.24□□□□□ -0.29
NUP54-201ENST00000264883 TRIM13O60858 407 aa13.24□□□□□ -0.29
NUP54-201ENST00000264883 CHRNGP07510 517 aa13.24□□□□□ -0.29
NUP54-201ENST00000264883 POLR2IP36954 125 aaKnown RBP13.24□□□□□ -0.29
NUP54-201ENST00000264883 HLCSP50747 726 aa13.24□□□□□ -0.29
NUP54-201ENST00000264883 RPL14P50914 215 aaKnown RBP13.24□□□□□ -0.29
NUP54-201ENST00000264883 IFITM3Q01628 133 aa13.24□□□□□ -0.29
NUP54-201ENST00000264883 ATAD3BQ5T9A4 648 aa13.24□□□□□ -0.29
NUP54-201ENST00000264883 RNF19BQ6ZMZ0 732 aa13.24□□□□□ -0.29
NUP54-201ENST00000264883 DNERQ8NFT8 737 aa13.24□□□□□ -0.29
NUP54-201ENST00000264883 PNPT1Q8TCS8 783 aaKnown RBP13.24□□□□□ -0.29
NUP54-201ENST00000264883 BHMTQ93088 406 aa13.24□□□□□ -0.29
NUP54-201ENST00000264883 CSF3RQ99062 836 aa13.24□□□□□ -0.29
NUP54-201ENST00000264883 BEGAINQ9BUH8 593 aa13.24□□□□□ -0.29
NUP54-201ENST00000264883 SCUBE2Q9NQ36 999 aa13.24□□□□□ -0.29
NUP54-201ENST00000264883 EIF2B3Q9NR50 452 aaKnown RBP13.24□□□□□ -0.29
NUP54-201ENST00000264883 PKD2L2Q9NZM6 624 aa13.24□□□□□ -0.29
NUP54-201ENST00000264883 KCNH4Q9UQ05 1017 aa13.24□□□□□ -0.29
NUP54-201ENST00000264883 RAP2CQ9Y3L5 183 aa13.24□□□□□ -0.29
NUP54-201ENST00000264883 PCDHGA3Q9Y5H0 932 aa13.24□□□□□ -0.29
NUP54-201ENST00000264883 ILVBLA1L0T0 632 aa13.23□□□□□ -0.29
NUP54-201ENST00000264883 CXCL11O14625 94 aa13.23□□□□□ -0.29
NUP54-201ENST00000264883 TRIM24O15164 1050 aa13.23□□□□□ -0.29
NUP54-201ENST00000264883 NR4A2P43354 598 aa13.23□□□□□ -0.29
NUP54-201ENST00000264883 NKX2-5P52952 324 aaPredicted RBP13.23□□□□□ -0.29
NUP54-201ENST00000264883 FSTL1Q12841 308 aa13.23□□□□□ -0.29
NUP54-201ENST00000264883 TUBA3CQ13748 450 aa13.23□□□□□ -0.29
NUP54-201ENST00000264883 IQSEC1Q6DN90 963 aa13.23□□□□□ -0.29
NUP54-201ENST00000264883 TTC23LQ6PF05 361 aa13.23□□□□□ -0.29
NUP54-201ENST00000264883 PLEKHG7Q6ZR37 379 aa13.23□□□□□ -0.29
NUP54-201ENST00000264883 AKAP14Q86UN6 197 aa13.23□□□□□ -0.29
NUP54-201ENST00000264883 EPHX4Q8IUS5 362 aa13.23□□□□□ -0.29
NUP54-201ENST00000264883 CLIP4Q8N3C7 705 aa13.23□□□□□ -0.29
NUP54-201ENST00000264883 SNX31Q8N9S9 440 aa13.23□□□□□ -0.29
NUP54-201ENST00000264883 NRBF2Q96F24 287 aa13.23□□□□□ -0.29
NUP54-201ENST00000264883 TEX13BQ9BXU2 312 aa13.23□□□□□ -0.29
NUP54-201ENST00000264883 UPF3AQ9H1J1 476 aaKnown RBP13.23□□□□□ -0.29
NUP54-201ENST00000264883 PCDH12Q9NPG4 1184 aa13.23□□□□□ -0.29
NUP54-201ENST00000264883 AKIP1Q9NQ31 210 aa13.23□□□□□ -0.29
NUP54-201ENST00000264883 ARMC1Q9NVT9 282 aa13.23□□□□□ -0.29
NUP54-201ENST00000264883 ADAM28Q9UKQ2 775 aa13.23□□□□□ -0.29
NUP54-201ENST00000264883 PRELID1Q9Y255 219 aa13.23□□□□□ -0.29
NUP54-201ENST00000264883 COPG1Q9Y678 874 aaKnown RBP13.23□□□□□ -0.29
NUP54-201ENST00000264883 DGKBQ9Y6T7 804 aa13.23□□□□□ -0.29
NUP54-201ENST00000264883 PRORSD1PA6NEY8 169 aa13.23□□□□□ -0.29
NUP54-201ENST00000264883 G3V2L1 256 aa13.23□□□□□ -0.29
NUP54-201ENST00000264883 NRP1O14786 923 aa13.23□□□□□ -0.29
NUP54-201ENST00000264883 KMOO15229 486 aa13.23□□□□□ -0.29
NUP54-201ENST00000264883 PHGDHO43175 533 aaKnown RBP13.23□□□□□ -0.29
NUP54-201ENST00000264883 GRID2O43424 1007 aa13.23□□□□□ -0.29
NUP54-201ENST00000264883 NUAK1O60285 661 aa13.23□□□□□ -0.29
NUP54-201ENST00000264883 MBL2P11226 248 aaPredicted RBP13.23□□□□□ -0.29
NUP54-201ENST00000264883 IL4RP24394 825 aa13.23□□□□□ -0.29
NUP54-201ENST00000264883 TRPC1P48995 793 aa13.23□□□□□ -0.29
NUP54-201ENST00000264883 LDLRAD1Q5T700 205 aa13.23□□□□□ -0.29
NUP54-201ENST00000264883 IRAK1BP1Q5VVH5 260 aa13.23□□□□□ -0.29
NUP54-201ENST00000264883 LRRC8EQ6NSJ5 796 aa13.23□□□□□ -0.29
NUP54-201ENST00000264883 CASC4Q6P4E1 433 aa13.23□□□□□ -0.29
NUP54-201ENST00000264883 GK5Q6ZS86 529 aa13.23□□□□□ -0.29
NUP54-201ENST00000264883 PARP8Q8N3A8 854 aa13.23□□□□□ -0.29
NUP54-201ENST00000264883 FAM110BQ8TC76 370 aa13.23□□□□□ -0.29
NUP54-201ENST00000264883 CANT1Q8WVQ1 401 aa13.23□□□□□ -0.29
NUP54-201ENST00000264883 QKIQ96PU8 341 aaKnown RBP eCLIP13.23□□□□□ -0.29
NUP54-201ENST00000264883 GATA5Q9BWX5 397 aaPredicted RBP13.23□□□□□ -0.29
NUP54-201ENST00000264883 YTHDF1Q9BYJ9 559 aaKnown RBP13.23□□□□□ -0.29
NUP54-201ENST00000264883 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.23□□□□□ -0.29
NUP54-201ENST00000264883 THG1LQ9NWX6 298 aaKnown RBP13.23□□□□□ -0.29
NUP54-201ENST00000264883 IFT80Q9P2H3 777 aaPredicted RBP13.23□□□□□ -0.29
NUP54-201ENST00000264883 PSAT1Q9Y617 370 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms