RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 NR2E1Q9Y466 385 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 ST14Q9Y5Y6 855 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 FKBP7Q9Y680 259 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 TNS2Q63HR2 1409 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 CYP3A7-CYP3A51PA0A087WV96 503 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 KBTBD13C9JR72 458 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 PMPCBO75439 489 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 LDOC1O95751 146 aaPredicted RBP6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 TGFB3P10600 412 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 CYP3A7P24462 503 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 PWP1Q13610 501 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 MPP2Q14168 576 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 TIGD6Q17RP2 521 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 RNF151Q2KHN1 245 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 C12orf45Q8N5I9 185 aaPredicted RBP6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 MAGEE2Q8TD90 523 aaPredicted RBP6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 GLG1Q92896 1179 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 RRNAD1Q96FB5 475 aaKnown RBP6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 TPD52L3Q96J77 140 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 MAGEB10Q96LZ2 347 aaPredicted RBP6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 CHP1Q99653 195 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 TTYH2Q9BSA4 534 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 ANKHQ9HCJ1 492 aa6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 INTS7Q9NVH2 962 aaKnown RBP6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.81□□□□□ -1.32
PDGFRA-201ENST00000257290 KCNQ2O43526 872 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 DFNA5O60443 496 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 PSMA3P25788 255 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 CHRNEQ04844 493 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 MKRN4PQ13434 485 aaPredicted RBP6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 ZNF410Q86VK4 478 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 TMEM17Q86X19 198 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 SLC35F3Q8IY50 421 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 FAM47BQ8NA70 645 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 KYQ8NBH2 561 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 RFT1Q96AA3 541 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 CCDC115Q96NT0 180 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 MED28Q9H204 178 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 PSME2Q9UL46 239 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 NEU2Q9Y3R4 380 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 HRH3Q9Y5N1 445 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 XRN1Q8IZH2 1706 aaKnown RBP6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 AKAP12Q02952 1782 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 SLC30A4O14863 429 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 TXNL1O43396 289 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 STX11O75558 287 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 KRT33AO76009 404 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 SRP72O76094 671 aaKnown RBP6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 CRTAMO95727 393 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 RB1P06400 928 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 GSTM1P09488 218 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 ERVK-10P10266 1014 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 IMPDH1P20839 514 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 CD40LGP29965 261 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 GATMP50440 423 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 FXR1P51114 621 aaKnown RBP eCLIP6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 ACTR3P61158 418 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 DSG2Q14126 1118 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 DCAF6Q58WW2 860 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 STRIP1Q5VSL9 837 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 USP43Q70EL4 1123 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 ZNF614Q8N883 585 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 CCDC17Q96LX7 622 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 LRFN5Q96NI6 719 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 CAMKK2Q96RR4 588 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 PHB2Q99623 299 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 BARD1Q99728 777 aaKnown RBP6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 BRINP2Q9C0B6 783 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 POLMQ9NP87 494 aaPredicted RBP6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 THUMPD1Q9NXG2 353 aaKnown RBP6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 EIF2B4Q9UI10 523 aaKnown RBP6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 TESMINQ9Y4I5 508 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 PEX16Q9Y5Y5 336 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 TM7SF2O76062 418 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 CCNB2O95067 398 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 ACLYP53396 1101 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 DYNLL1P63167 89 aaKnown RBP6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 SEL1L3Q68CR1 1132 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 ZNF561Q8N587 486 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 OR5T3Q8NGG3 340 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 DEDD2Q8WXF8 326 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 ZNF566Q969W8 418 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 INTS12Q96CB8 462 aaKnown RBP6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 BLZF1Q9H2G9 400 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 OR6C74A6NCV1 312 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 E9PI62 339 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 CDC7O00311 574 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 SSNA1O43805 119 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 TCN1P20061 433 aaPredicted RBP6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 TALDO1P37837 337 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 SERPINB9P50453 376 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 IFI35P80217 286 aaPredicted RBP6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 WDR72Q3MJ13 1102 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 IL31Q6EBC2 164 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 PAPD4Q6PIY7 484 aaKnown RBP6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 SYDE1Q6ZW31 735 aaPredicted RBP6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 PDSS2Q86YH6 399 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 CDH26Q8IXH8 852 aa6.8□□□□□ -1.32
PDGFRA-201ENST00000257290 ZNF565Q8N9K5 539 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms