RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 PARP6Q2NL67 630 aa17.18■□□□□ 0.34
CDKN1A-201ENST00000244741 ACCSLQ4AC99 568 aa17.18■□□□□ 0.34
CDKN1A-201ENST00000244741 HEATR6Q6AI08 1181 aaKnown RBP17.18■□□□□ 0.34
CDKN1A-201ENST00000244741 CLNKQ7Z7G1 428 aa17.18■□□□□ 0.34
CDKN1A-201ENST00000244741 ARHGAP12Q8IWW6 846 aa17.18■□□□□ 0.34
CDKN1A-201ENST00000244741 OSCP1Q8WVF1 389 aa17.18■□□□□ 0.34
CDKN1A-201ENST00000244741 BBS2Q9BXC9 721 aa17.18■□□□□ 0.34
CDKN1A-201ENST00000244741 KCNK13Q9HB14 408 aa17.18■□□□□ 0.34
CDKN1A-201ENST00000244741 DENND4AQ7Z401 1863 aa17.17■□□□□ 0.34
CDKN1A-201ENST00000244741 FAM159BA6NKW6 160 aa17.17■□□□□ 0.34
CDKN1A-201ENST00000244741 GFRA2O00451 464 aa17.17■□□□□ 0.34
CDKN1A-201ENST00000244741 TRIM24O15164 1050 aa17.17■□□□□ 0.34
CDKN1A-201ENST00000244741 GSTA2P09210 222 aa17.17■□□□□ 0.34
CDKN1A-201ENST00000244741 NEFHP12036 1026 aa17.17■□□□□ 0.34
CDKN1A-201ENST00000244741 ACVRL1P37023 503 aa17.17■□□□□ 0.34
CDKN1A-201ENST00000244741 ZNF135P52742 658 aaPredicted RBP17.17■□□□□ 0.34
CDKN1A-201ENST00000244741 AP1B1Q10567 949 aa17.17■□□□□ 0.34
CDKN1A-201ENST00000244741 SEMA5AQ13591 1074 aa17.17■□□□□ 0.34
CDKN1A-201ENST00000244741 OTOP3Q7RTS5 596 aa17.17■□□□□ 0.34
CDKN1A-201ENST00000244741 HJURPQ8NCD3 748 aaPredicted RBP17.17■□□□□ 0.34
CDKN1A-201ENST00000244741 GSDMBQ8TAX9 411 aa17.17■□□□□ 0.34
CDKN1A-201ENST00000244741 HTR3CQ8WXA8 447 aa17.17■□□□□ 0.34
CDKN1A-201ENST00000244741 INPP5DQ92835 1189 aa17.17■□□□□ 0.34
CDKN1A-201ENST00000244741 IRF7Q92985 503 aa17.17■□□□□ 0.34
CDKN1A-201ENST00000244741 HMCESQ96FZ2 354 aa17.17■□□□□ 0.34
CDKN1A-201ENST00000244741 OLFM3Q96PB7 478 aa17.17■□□□□ 0.34
CDKN1A-201ENST00000244741 CEP41Q9BYV8 373 aa17.17■□□□□ 0.34
CDKN1A-201ENST00000244741 TRPV4Q9HBA0 871 aa17.17■□□□□ 0.34
CDKN1A-201ENST00000244741 SPHK2Q9NRA0 654 aa17.17■□□□□ 0.34
CDKN1A-201ENST00000244741 TBC1D14Q9P2M4 693 aa17.17■□□□□ 0.34
CDKN1A-201ENST00000244741 PLLPQ9Y342 182 aa17.17■□□□□ 0.34
CDKN1A-201ENST00000244741 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.16■□□□□ 0.34
CDKN1A-201ENST00000244741 A0A1B0GVM2 712 aa17.16■□□□□ 0.34
CDKN1A-201ENST00000244741 HMX2A2RU54 273 aa17.16■□□□□ 0.34
CDKN1A-201ENST00000244741 TCAF2A6NFQ2 919 aa17.16■□□□□ 0.34
CDKN1A-201ENST00000244741 CDH4P55283 916 aa17.16■□□□□ 0.34
CDKN1A-201ENST00000244741 ZNF177Q13360 481 aaPredicted RBP17.16■□□□□ 0.34
CDKN1A-201ENST00000244741 EML3Q32P44 896 aa17.16■□□□□ 0.34
CDKN1A-201ENST00000244741 C5orf22Q49AR2 442 aa17.16■□□□□ 0.34
CDKN1A-201ENST00000244741 SPDYAQ5MJ70 313 aa17.16■□□□□ 0.34
CDKN1A-201ENST00000244741 ANKRD20A2Q5SQ80 823 aa17.16■□□□□ 0.34
CDKN1A-201ENST00000244741 LGSNQ5TDP6 509 aa17.16■□□□□ 0.34
CDKN1A-201ENST00000244741 ANKRD20A1Q5TYW2 823 aa17.16■□□□□ 0.34
CDKN1A-201ENST00000244741 ANKRD20A3Q5VUR7 823 aa17.16■□□□□ 0.34
CDKN1A-201ENST00000244741 MFN1Q8IWA4 741 aa17.16■□□□□ 0.34
CDKN1A-201ENST00000244741 CPXM2Q8N436 756 aa17.16■□□□□ 0.34
CDKN1A-201ENST00000244741 OR7D4Q8NG98 312 aa17.16■□□□□ 0.34
CDKN1A-201ENST00000244741 MAFAQ8NHW3 353 aaPredicted RBP17.16■□□□□ 0.34
CDKN1A-201ENST00000244741 TFB1MQ8WVM0 346 aaKnown RBP17.16■□□□□ 0.34
CDKN1A-201ENST00000244741 OXNAD1Q96HP4 312 aaPredicted RBP17.16■□□□□ 0.34
CDKN1A-201ENST00000244741 TBC1D10AQ9BXI6 508 aa17.16■□□□□ 0.34
CDKN1A-201ENST00000244741 SLC13A1Q9BZW2 595 aa17.16■□□□□ 0.34
CDKN1A-201ENST00000244741 IQCGQ9H095 443 aaKnown RBP17.16■□□□□ 0.34
CDKN1A-201ENST00000244741 GTSE1Q9NYZ3 720 aa17.16■□□□□ 0.34
CDKN1A-201ENST00000244741 HEY2Q9UBP5 337 aa17.16■□□□□ 0.34
CDKN1A-201ENST00000244741 LIMD1Q9UGP4 676 aa17.16■□□□□ 0.34
CDKN1A-201ENST00000244741 MCM8Q9UJA3 840 aa17.16■□□□□ 0.34
CDKN1A-201ENST00000244741 SHROOM3Q8TF72 1996 aa17.16■□□□□ 0.34
CDKN1A-201ENST00000244741 TYW5A2RUC4 315 aaKnown RBP17.16■□□□□ 0.34
CDKN1A-201ENST00000244741 CLDN11O75508 207 aa17.16■□□□□ 0.34
CDKN1A-201ENST00000244741 TYRP14679 529 aa17.16■□□□□ 0.34
CDKN1A-201ENST00000244741 CCND1P24385 295 aa17.16■□□□□ 0.34
CDKN1A-201ENST00000244741 HTR7P34969 479 aa17.16■□□□□ 0.34
CDKN1A-201ENST00000244741 PAPOLAP51003 745 aaKnown RBP17.16■□□□□ 0.34
CDKN1A-201ENST00000244741 CDH18Q13634 790 aa17.16■□□□□ 0.34
CDKN1A-201ENST00000244741 DHCR24Q15392 516 aa17.16■□□□□ 0.34
CDKN1A-201ENST00000244741 MPPE1Q53F39 396 aa17.16■□□□□ 0.34
CDKN1A-201ENST00000244741 PTCRAQ6ISU1 281 aaPredicted RBP17.16■□□□□ 0.34
CDKN1A-201ENST00000244741 MFSD6LQ8IWD5 586 aa17.16■□□□□ 0.34
CDKN1A-201ENST00000244741 YAF2Q8IY57 180 aa17.16■□□□□ 0.34
CDKN1A-201ENST00000244741 SPON2Q9BUD6 331 aa17.16■□□□□ 0.34
CDKN1A-201ENST00000244741 MECRQ9BV79 373 aa17.16■□□□□ 0.34
CDKN1A-201ENST00000244741 XAB2Q9HCS7 855 aaKnown RBP17.16■□□□□ 0.34
CDKN1A-201ENST00000244741 SEPT10Q9P0V9 454 aa17.16■□□□□ 0.34
CDKN1A-201ENST00000244741 MUC3AQ02505 3323 aa17.15■□□□□ 0.34
CDKN1A-201ENST00000244741 MYO10Q9HD67 2058 aa17.15■□□□□ 0.34
CDKN1A-201ENST00000244741 A0A0A0MRY4 1105 aa17.15■□□□□ 0.34
CDKN1A-201ENST00000244741 RAMP2O60895 175 aa17.15■□□□□ 0.34
CDKN1A-201ENST00000244741 TGDSO95455 350 aa17.15■□□□□ 0.34
CDKN1A-201ENST00000244741 CYBBP04839 570 aa17.15■□□□□ 0.34
CDKN1A-201ENST00000244741 CYP17A1P05093 508 aa17.15■□□□□ 0.34
CDKN1A-201ENST00000244741 DLDP09622 509 aaKnown RBP17.15■□□□□ 0.34
CDKN1A-201ENST00000244741 IL9P15248 144 aa17.15■□□□□ 0.34
CDKN1A-201ENST00000244741 TCF3P15923 654 aa17.15■□□□□ 0.34
CDKN1A-201ENST00000244741 GLDCP23378 1020 aa17.15■□□□□ 0.34
CDKN1A-201ENST00000244741 GDI1P31150 447 aa17.15■□□□□ 0.34
CDKN1A-201ENST00000244741 SERPINB6P35237 376 aa17.15■□□□□ 0.34
CDKN1A-201ENST00000244741 CCNFP41002 786 aa17.15■□□□□ 0.34
CDKN1A-201ENST00000244741 ARFIP2P53365 341 aa17.15■□□□□ 0.34
CDKN1A-201ENST00000244741 POLD3Q15054 466 aaPredicted RBP17.15■□□□□ 0.34
CDKN1A-201ENST00000244741 ACBD5Q5T8D3 534 aaPredicted RBP17.15■□□□□ 0.34
CDKN1A-201ENST00000244741 CXorf57Q6NSI4 855 aaKnown RBP17.15■□□□□ 0.34
CDKN1A-201ENST00000244741 LONP2Q86WA8 852 aa17.15■□□□□ 0.34
CDKN1A-201ENST00000244741 SPATA13Q96N96 652 aa17.15■□□□□ 0.34
CDKN1A-201ENST00000244741 TMEM120AQ9BXJ8 343 aa17.15■□□□□ 0.34
CDKN1A-201ENST00000244741 EBF2Q9HAK2 575 aa17.15■□□□□ 0.34
CDKN1A-201ENST00000244741 SAR1AQ9NR31 198 aa17.15■□□□□ 0.34
CDKN1A-201ENST00000244741 ACTL7AQ9Y615 435 aa17.15■□□□□ 0.34
CDKN1A-201ENST00000244741 WASH4PA8MWX3 477 aa17.15■□□□□ 0.34
CDKN1A-201ENST00000244741 HACD1B0YJ81 288 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms