RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 TROVE2P10155 538 aaKnown RBP eCLIP8.08□□□□□ -1.12
CXCR4-201ENST00000241393 PDGFRAP16234 1089 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 ZFXP17010 805 aaPredicted RBP8.08□□□□□ -1.12
CXCR4-201ENST00000241393 KRT4P19013 534 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 SSTR1P30872 391 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 RASSF2P50749 326 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 NEK2P51955 445 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 CDH6P55285 790 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 CCNA1P78396 465 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 SLC18A2Q05940 514 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 MGAT5Q09328 741 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 DNAJC3Q13217 504 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 SLC1A5Q15758 541 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 CR1LQ2VPA4 569 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 ARHGAP17Q68EM7 881 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 SLC9A4Q6AI14 798 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 OR6B2Q6IFH4 312 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 ESRP1Q6NXG1 681 aaKnown RBP8.08□□□□□ -1.12
CXCR4-201ENST00000241393 DARS2Q6PI48 645 aaKnown RBP8.08□□□□□ -1.12
CXCR4-201ENST00000241393 LVRNQ6Q4G3 990 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 PRR23BQ6ZRT6 265 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 ARMCX2Q7L311 632 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 TMEM110Q86TL2 294 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 PNMA8AQ86V59 439 aaPredicted RBP8.08□□□□□ -1.12
CXCR4-201ENST00000241393 SESTD1Q86VW0 696 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 UNC93AQ86WB7 457 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 C4orf33Q8N1A6 199 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 LRRC52Q8N7C0 313 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 FAM71DQ8N9W8 422 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 MCUQ8NE86 351 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.08□□□□□ -1.12
CXCR4-201ENST00000241393 C10orf82Q8WW14 230 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 SLC44A1Q8WWI5 657 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 HSPH1Q92598 858 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 ZNF75CPQ92670 426 aaPredicted RBP8.08□□□□□ -1.12
CXCR4-201ENST00000241393 FAF2Q96CS3 445 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 LRRC37BQ96QE4 947 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 PEBP4Q96S96 227 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 TSPAN18Q96SJ8 248 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 SMAD5Q99717 465 aaKnown RBP8.08□□□□□ -1.12
CXCR4-201ENST00000241393 PAIP2Q9BPZ3 127 aaKnown RBP8.08□□□□□ -1.12
CXCR4-201ENST00000241393 WDR83Q9BRX9 315 aaKnown RBP8.08□□□□□ -1.12
CXCR4-201ENST00000241393 TUBB6Q9BUF5 446 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 DNAI2Q9GZS0 605 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.08□□□□□ -1.12
CXCR4-201ENST00000241393 GALNT8Q9NY28 637 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 DPP3Q9NY33 737 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 SAE1Q9UBE0 346 aaPredicted RBP8.08□□□□□ -1.12
CXCR4-201ENST00000241393 ZNF180Q9UJW8 692 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 TSPAN16Q9UKR8 245 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 TEX264Q9Y6I9 313 aa8.08□□□□□ -1.12
CXCR4-201ENST00000241393 PLXNA1Q9UIW2 1896 aa8.07□□□□□ -1.12
CXCR4-201ENST00000241393 MGAMO43451 1857 aa8.07□□□□□ -1.12
CXCR4-201ENST00000241393 A0A1W2PPM1 405 aa8.07□□□□□ -1.12
CXCR4-201ENST00000241393 VGLL3A8MV65 326 aa8.07□□□□□ -1.12
CXCR4-201ENST00000241393 ADM5C9JUS6 153 aa8.07□□□□□ -1.12
CXCR4-201ENST00000241393 GOLGA8MH3BSY2 632 aa8.07□□□□□ -1.12
CXCR4-201ENST00000241393 TRAFD1O14545 582 aaPredicted RBP8.07□□□□□ -1.12
CXCR4-201ENST00000241393 APOL1O14791 398 aa8.07□□□□□ -1.12
CXCR4-201ENST00000241393 ZNF189O75820 626 aaPredicted RBP8.07□□□□□ -1.12
CXCR4-201ENST00000241393 TGDSO95455 350 aa8.07□□□□□ -1.12
CXCR4-201ENST00000241393 MT-ND3P03897 115 aa8.07□□□□□ -1.12
CXCR4-201ENST00000241393 PFKMP08237 780 aa8.07□□□□□ -1.12
CXCR4-201ENST00000241393 DHRS4L1P0CG22 281 aa8.07□□□□□ -1.12
CXCR4-201ENST00000241393 CYP3A5P20815 502 aa8.07□□□□□ -1.12
CXCR4-201ENST00000241393 PTPN9P43378 593 aa8.07□□□□□ -1.12
CXCR4-201ENST00000241393 KCNJ2P63252 427 aa8.07□□□□□ -1.12
CXCR4-201ENST00000241393 BASP1P80723 227 aaKnown RBP8.07□□□□□ -1.12
CXCR4-201ENST00000241393 SLC6A3Q01959 620 aa8.07□□□□□ -1.12
CXCR4-201ENST00000241393 KRT81Q14533 505 aa8.07□□□□□ -1.12
CXCR4-201ENST00000241393 TAPT1Q6NXT6 567 aa8.07□□□□□ -1.12
CXCR4-201ENST00000241393 MTHFD1LQ6UB35 978 aa8.07□□□□□ -1.12
CXCR4-201ENST00000241393 OLFML1Q6UWY5 402 aa8.07□□□□□ -1.12
CXCR4-201ENST00000241393 FAM47EQ6ZV65 393 aa8.07□□□□□ -1.12
CXCR4-201ENST00000241393 FAM183BPQ6ZVS7 135 aa8.07□□□□□ -1.12
CXCR4-201ENST00000241393 CDR2LQ86X02 465 aaPredicted RBP8.07□□□□□ -1.12
CXCR4-201ENST00000241393 CDKL3Q8IVW4 592 aaPredicted RBP8.07□□□□□ -1.12
CXCR4-201ENST00000241393 PLD5Q8N7P1 536 aa8.07□□□□□ -1.12
CXCR4-201ENST00000241393 CFAP61Q8NHU2 1237 aa8.07□□□□□ -1.12
CXCR4-201ENST00000241393 APOPT1Q96IL0 206 aa8.07□□□□□ -1.12
CXCR4-201ENST00000241393 ANKRD27Q96NW4 1050 aa8.07□□□□□ -1.12
CXCR4-201ENST00000241393 KLC2Q9H0B6 622 aa8.07□□□□□ -1.12
CXCR4-201ENST00000241393 CNTD2Q9H8S5 307 aa8.07□□□□□ -1.12
CXCR4-201ENST00000241393 EBF2Q9HAK2 575 aa8.07□□□□□ -1.12
CXCR4-201ENST00000241393 KIF9Q9HAQ2 790 aa8.07□□□□□ -1.12
CXCR4-201ENST00000241393 USP29Q9HBJ7 922 aa8.07□□□□□ -1.12
CXCR4-201ENST00000241393 SAR1AQ9NR31 198 aa8.07□□□□□ -1.12
CXCR4-201ENST00000241393 C14orf119Q9NWQ9 140 aa8.07□□□□□ -1.12
CXCR4-201ENST00000241393 MKS1Q9NXB0 559 aa8.07□□□□□ -1.12
CXCR4-201ENST00000241393 BAIAP2L1Q9UHR4 511 aa8.07□□□□□ -1.12
CXCR4-201ENST00000241393 MBD1Q9UIS9 605 aaPredicted RBP8.07□□□□□ -1.12
CXCR4-201ENST00000241393 SLC45A1Q9Y2W3 748 aa8.07□□□□□ -1.12
CXCR4-201ENST00000241393 IKBKGQ9Y6K9 419 aa8.07□□□□□ -1.12
CXCR4-201ENST00000241393 EVPLQ92817 2033 aa8.06□□□□□ -1.12
CXCR4-201ENST00000241393 TCRBV7S3A2A0A539 114 aa8.06□□□□□ -1.12
CXCR4-201ENST00000241393 TCRBV9S1A1TA0A576 114 aa8.06□□□□□ -1.12
CXCR4-201ENST00000241393 E5RJQ4 531 aa8.06□□□□□ -1.12
CXCR4-201ENST00000241393 H7C0C1 242 aa8.06□□□□□ -1.12
CXCR4-201ENST00000241393 KLF11O14901 512 aa8.06□□□□□ -1.12
CXCR4-201ENST00000241393 INHBAP08476 426 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms