RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 MTRRQ9UBK8 725 aa9.5□□□□□ -0.89
CCDC113-201ENST00000219299 GRID1Q9ULK0 1009 aa9.5□□□□□ -0.89
CCDC113-201ENST00000219299 CHKBQ9Y259 395 aa9.5□□□□□ -0.89
CCDC113-201ENST00000219299 NCKAP1Q9Y2A7 1128 aa9.5□□□□□ -0.89
CCDC113-201ENST00000219299 NR2E1Q9Y466 385 aa9.5□□□□□ -0.89
CCDC113-201ENST00000219299 ZNF132P52740 706 aa9.5□□□□□ -0.89
CCDC113-201ENST00000219299 LBRQ14739 615 aaKnown RBP9.5□□□□□ -0.89
CCDC113-201ENST00000219299 TTC39BQ5VTQ0 682 aaPredicted RBP9.5□□□□□ -0.89
CCDC113-201ENST00000219299 IRGCQ6NXR0 463 aa9.5□□□□□ -0.89
CCDC113-201ENST00000219299 HORMAD1Q86X24 394 aa9.5□□□□□ -0.89
CCDC113-201ENST00000219299 CASD1Q96PB1 797 aa9.5□□□□□ -0.89
CCDC113-201ENST00000219299 C17orf80Q9BSJ5 609 aa9.5□□□□□ -0.89
CCDC113-201ENST00000219299 TEX12Q9BXU0 123 aa9.5□□□□□ -0.89
CCDC113-201ENST00000219299 ITGB1BP2Q9UKP3 347 aa9.5□□□□□ -0.89
CCDC113-201ENST00000219299 DOCK3Q8IZD9 2030 aa9.5□□□□□ -0.89
CCDC113-201ENST00000219299 VPS26AO75436 327 aa9.5□□□□□ -0.89
CCDC113-201ENST00000219299 CTPS1P17812 591 aa9.5□□□□□ -0.89
CCDC113-201ENST00000219299 GLRBP48167 497 aa9.5□□□□□ -0.89
CCDC113-201ENST00000219299 FBXL22Q6P050 247 aa9.5□□□□□ -0.89
CCDC113-201ENST00000219299 FOXR1Q6PIV2 292 aa9.5□□□□□ -0.89
CCDC113-201ENST00000219299 CPA6Q8N4T0 437 aa9.5□□□□□ -0.89
CCDC113-201ENST00000219299 PLD4Q96BZ4 506 aa9.5□□□□□ -0.89
CCDC113-201ENST00000219299 TIFAQ96CG3 184 aa9.5□□□□□ -0.89
CCDC113-201ENST00000219299 FAM210AQ96ND0 272 aa9.5□□□□□ -0.89
CCDC113-201ENST00000219299 PRKD2Q9BZL6 878 aa9.5□□□□□ -0.89
CCDC113-201ENST00000219299 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.5□□□□□ -0.89
CCDC113-201ENST00000219299 A0A1B0GW55 424 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 TIMM44O43615 452 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 PIAS1O75925 651 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 DUX4L2P0CJ85 424 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 DUX4L3P0CJ86 424 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 DUX4L4P0CJ87 422 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 DUX4L5P0CJ88 424 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 DUX4L6P0CJ89 424 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 DUX4L7P0CJ90 424 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 SCNN1AP37088 669 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 MAPK8P45983 427 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 HADHBP55084 474 aaKnown RBP9.49□□□□□ -0.89
CCDC113-201ENST00000219299 PITX1P78337 314 aaPredicted RBP9.49□□□□□ -0.89
CCDC113-201ENST00000219299 CDK18Q07002 472 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 XRCC4Q13426 336 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 KRR1Q13601 381 aaKnown RBP9.49□□□□□ -0.89
CCDC113-201ENST00000219299 PARP15Q460N3 678 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 ZC3H12BQ5HYM0 836 aaKnown RBP9.49□□□□□ -0.89
CCDC113-201ENST00000219299 USP45Q70EL2 814 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 SLC26A11Q86WA9 606 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 CLEC4FQ8N1N0 589 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 SLC39A11Q8N1S5 342 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 WDTC1Q8N5D0 677 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 LINC01465Q8N7H1 131 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 LEMD2Q8NC56 503 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 PSMG2Q969U7 264 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 SAMD11Q96NU1 681 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 KLHL4Q9C0H6 718 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 PNPLA8Q9NP80 782 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 CD274Q9NZQ7 290 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 DUX4Q9UBX2 424 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 FZD10Q9ULW2 581 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 SRRM3A6NNA2 597 aaPredicted RBP9.49□□□□□ -0.89
CCDC113-201ENST00000219299 UGT2B4P06133 528 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 RB1P06400 928 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 ABCG1P45844 678 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 MLLT6P55198 1093 aaPredicted RBP9.49□□□□□ -0.89
CCDC113-201ENST00000219299 CDH4P55283 916 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 ZBTB6Q15916 424 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 FAM83EQ2M2I3 478 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 FER1L6Q2WGJ9 1857 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 FAM182AQ5T1J6 154 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 TRAF7Q6Q0C0 670 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 CHST9Q7L1S5 443 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 OTOP3Q7RTS5 596 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 GPRIN1Q7Z2K8 1008 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 ANKRD33Q7Z3H0 272 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 KCNMB4Q86W47 210 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 RTL3Q8N8U3 475 aaKnown RBP9.49□□□□□ -0.89
CCDC113-201ENST00000219299 JADE3Q92613 823 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 NMD3Q96D46 503 aaKnown RBP9.49□□□□□ -0.89
CCDC113-201ENST00000219299 UTP6Q9NYH9 597 aaKnown RBP9.49□□□□□ -0.89
CCDC113-201ENST00000219299 BACE2Q9Y5Z0 518 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 WNT6Q9Y6F9 365 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 CLUHO75153 1309 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 GRM6O15303 877 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 EPHX1P07099 455 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 CTSAP10619 480 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 PSMC3P17980 439 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 SERPINB8P50452 374 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 TRMT5Q32P41 509 aaKnown RBP9.49□□□□□ -0.89
CCDC113-201ENST00000219299 ANGPTL8Q6UXH0 198 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 IZUMO2Q6UXV1 221 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 ARID3BQ8IVW6 561 aaPredicted RBP9.49□□□□□ -0.89
CCDC113-201ENST00000219299 DDIASQ8IXT1 998 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 UNKQ9C0B0 810 aaKnown RBP9.49□□□□□ -0.89
CCDC113-201ENST00000219299 GLOD4Q9HC38 313 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 SYBUQ9NX95 663 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 EVLQ9UI08 416 aaPredicted RBP9.49□□□□□ -0.89
CCDC113-201ENST00000219299 GGA2Q9UJY4 613 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 MCM3APO60318 1980 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 DOCK1Q14185 1865 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 C1orf232A0A0U1RR37 186 aa9.49□□□□□ -0.89
CCDC113-201ENST00000219299 C1QTNF3-AMACRE9PGA6 284 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms