RNA–Protein interactions for RNA: ENSMUST00000108593.7

Ctdnep1-201, Transcript of CTD nuclear envelope phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdnep1, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1-201ENSMUST00000108593 Rbm42Q91V81 474 aaKnown RBP30.78■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Rabl3Q9D4V7 236 aa30.78■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Cyp2b19O55071 492 aa30.77■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Rab20P35295 233 aa30.77■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Ptpn5P54830 541 aa30.77■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Itga1Q3V3R4 1179 aa30.77■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Afap1l2Q5DTU0 825 aa30.77■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Ncoa7Q6DFV7 943 aa30.77■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Anks6Q6GQX6 883 aa30.77■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Taf1cQ6PDZ2 836 aa30.77■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Got1l1Q7TSV6 404 aa30.77■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Zc3h3Q8CHP0 950 aa30.77■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Ankrd7Q9D504 279 aa30.77■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Mbd1Q9Z2E2 636 aa30.77■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Iqca1lA6H690 825 aa30.76■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Chrna4O70174 629 aa30.76■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 F3P20352 294 aa30.76■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Lefty2P57785 368 aa30.76■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Gm11492Q5ND19 536 aa30.76■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Dhx58Q99J87 678 aa30.76■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 PbsnO08976 174 aa30.76■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Nthl1O35980 300 aa30.76■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Fpr-rs3O88537 343 aa30.76■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 P01807 119 aa30.76■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 F9P16294 471 aa30.76■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 CenplQ3U3S3 329 aa30.76■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Gm29609Q3UU56 907 aa30.76■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Ppm1hQ3UYC0 513 aa30.76■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Pick1Q62083 416 aa30.76■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Ccdc57Q6PHN1 1016 aa30.76■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Tha1Q6XPS7 400 aa30.76■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Rpp38Q80UU2 280 aa30.76■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Zfp438Q8BFX2 798 aa30.76■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Exoc3l1Q8BI71 739 aa30.76■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Gtf3c2Q8BL74 907 aa30.76■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Tarsl2Q8BLY2 790 aa30.76■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Sh3kbp1Q8R550 709 aaKnown RBP30.76■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Atp6v1e2Q9D593 226 aa30.76■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Znf536Q8K083 1302 aa30.75■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Vmn2r10K7N621 847 aa30.75■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 HdcP23738 662 aa30.75■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 IduaP48441 634 aa30.75■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Zbtb14Q08376 449 aa30.75■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 MtbpQ8BJS8 894 aaKnown RBP30.75■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Kiaa1671Q8BRV5 308 aa30.75■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Zswim4Q8C7B8 1101 aa30.75■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Mmgt1Q8K273 131 aaKnown RBP30.75■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Olfr371Q8VGB8 312 aa30.75■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Arl2bpQ9D385 163 aa30.75■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Ecel1Q9JMI0 775 aa30.75■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Osbpl9A2A8Z1 736 aa30.74■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Zbtb34A2ATY4 518 aa30.74■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Fam46dB1ATX6 390 aa30.74■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Tubgcp3P58854 905 aa30.74■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Qsox2Q3TMX7 692 aa30.74■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Bcl2l1Q64373 233 aa30.74■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Lingo3Q6GQU6 589 aa30.74■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Dsg1bQ7TSF1 1060 aa30.74■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Camk1dQ8BW96 385 aa30.74■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Adamts2Q8C9W3 1213 aa30.74■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Rpp25Q91WE3 199 aa30.74■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Senp2Q91ZX6 588 aa30.74■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Rab6bP61294 208 aa30.73■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Ifnl2Q4VK74 193 aa30.73■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Olfr366Q7TRY4 309 aa30.73■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Tbx10Q810F8 385 aa30.73■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Orai2Q8BH10 250 aa30.73■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Pex5lQ8C437 567 aa30.73■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Sphk1Q8CI15 382 aa30.73■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Nup85Q8R480 656 aaKnown RBP30.73■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Osbpl1aQ91XL9 950 aa30.73■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 DdoQ922Z0 341 aa30.73■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Mrps17Q9CQE3 120 aaKnown RBP30.73■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Gadd45gip1Q9CR59 222 aa30.73■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Cxxc1Q9CWW7 660 aa30.73■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Tmco5aQ9D9D5 303 aa30.73■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Tmem174Q9DCX7 243 aa30.73■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Tsc1Q9EP53 1161 aa30.73■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Vmn2r116E9Q6I0 856 aa30.73■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 CtslP06797 334 aa30.73■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Pou2f3P31362 431 aa30.73■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Hsd17b4P51660 735 aaKnown RBP30.73■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Ezh1P70351 747 aa30.73■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 1700061G19RikQ08EE8 705 aa30.73■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Gcnt3Q5JCT0 437 aa30.73■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Ankrd6Q69ZU8 712 aa30.73■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Inpp4bQ6P1Y8 924 aa30.73■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 InavaQ7TN12 663 aa30.73■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 LnpkQ7TQ95 425 aa30.73■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Fam83dQ9D7I8 585 aa30.73■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 NagaQ9QWR8 415 aa30.73■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Scgb2b12S4R2L0 112 aa30.73■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Cacna1dQ99246 2179 aa30.72■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Glyatl3E9Q5L8 290 aa30.72■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Kif3cO35066 796 aa30.72■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Pdia4P08003 638 aaKnown RBP30.72■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Ms4a1P19437 291 aa30.72■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Slc11a1P41251 548 aa30.72■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Lrrc27Q80YS5 523 aa30.72■■■□□ 2.51
Ctdnep1-201ENSMUST00000108593 Frmd3Q8BHD4 595 aa30.72■■■□□ 2.51
Retrieved 100 of 22,080 RNA–protein pairs in 21.5 ms