RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Copg2Q9QXK3 871 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 Stk11Q9WTK7 436 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 Rad51ap2G3UW63 976 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 Vmn2r54K7N649 806 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 Mllt10O54826 1068 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 VimP20152 466 aaKnown RBP8.8□□□□□ -1
Trim39-201ENSMUST00000042717 Serpina3cP29621 417 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 Vps4bP46467 444 aaKnown RBP8.8□□□□□ -1
Trim39-201ENSMUST00000042717 S100bP50114 92 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 Psmb4P99026 264 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 Tex11Q14AT2 947 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 Fam83fQ3UKU4 495 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 Slc22a16Q497L8 649 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 Gm5414Q6IFZ8 552 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 AtminQ6P9S1 818 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 Olfr667Q7TRP4 326 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 Q8BWG4 1187 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 BfarQ8R079 450 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 Impg1Q8R1W8 798 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 Thoc1Q8R3N6 657 aaKnown RBP8.8□□□□□ -1
Trim39-201ENSMUST00000042717 Ttc39cQ8VE09 580 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 Olfr478Q8VG04 314 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 Cyp2c70Q91W64 489 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 DcxrQ91X52 244 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 Ecrg4Q99LS0 148 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 Nt5c3aQ9D020 331 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 Cab39lQ9DB16 337 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 Krt7Q9DCV7 457 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 Cep290Q6A078 2472 aa8.8□□□□□ -1
Trim39-201ENSMUST00000042717 Cep85lA0A1W2P884 806 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 SmgcF6VRN1 385 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Gm7942L7N277 499 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 GzmkO35205 263 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Srpk1O70551 648 aaKnown RBP8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Pdha1P35486 390 aaKnown RBP8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Dbx1P52950 335 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Ldb1P70662 411 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Prss55Q14BX2 321 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Fam81aQ3UXZ6 364 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Nfe2l1Q61985 741 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Spa17Q62252 149 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Nomo1Q6GQT9 1214 aaKnown RBP8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Prr18Q6PAN7 307 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Trpm4Q7TN37 1213 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Zic5Q7TQ40 622 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Olfr1062Q7TR71 315 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Rimbp2Q80U40 1072 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Trit1Q80UN9 467 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 B3galnt2Q8BG28 504 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 AopepQ8BXQ6 817 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 TbcdQ8BYA0 1196 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Pcyox1lQ8C7K6 495 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Glcci1Q8K3I9 537 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Gfm2Q8R2Q4 779 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Slc30a5Q8R4H9 761 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Rin1Q921Q7 763 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Commd8Q9CZG3 183 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Fam83dQ9D7I8 585 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Asb3Q9WV72 525 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 4933424G06RikA0A140LIP3 267 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 SpaarA0A1B0GSZ0 75 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Tbc1d16A2ABG4 766 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Gm13089A2AGW7 455 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Akap5D3YVF0 745 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Zfp780bE9Q2S6 806 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Sult1e1P49891 295 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 St14P56677 855 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Ctps1P70698 591 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Naf1Q3UMQ8 489 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Spire1Q52KF3 598 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Rnf215Q5SPX3 379 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Amer3Q6NS69 780 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Scd4Q6T707 353 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Hamp2Q80T19 83 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Mtmr12Q80TA6 747 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Lrrc27Q80YS5 523 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Arl5aQ80ZU0 179 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Suds3Q8BR65 328 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Ppp4r4Q8C0Y0 875 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Ccdc63Q8CDV6 558 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Dedd2Q8QZV0 330 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Bag2Q91YN9 210 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Sfxn1Q99JR1 322 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Cttnbp2nlQ99LJ0 638 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 LiasQ99M04 373 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Cldnd1Q9CQX5 253 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Rps6kb2Q9Z1M4 485 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Gm12248A0A1W2P8B8 313 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Gm5936A2BG95 728 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Gm5640A3KG49 728 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Gm13285B1AYI3 182 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Gm13275B1AYI8 182 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Hk1P17710 974 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Scg3P47867 471 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Mrps6P58064 125 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Rab33aP97950 237 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Spata48Q5NC83 441 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Krt77Q6IFZ6 572 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Atg16l2Q6KAU8 623 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Gm7247Q6UY52 187 aa8.79□□□□□ -1
Retrieved 100 of 22,080 RNA–protein pairs in 43.2 ms