RNA–Protein interactions for RNA: ENSMUST00000030586.14

Ccdc28b-201, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28b, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-201ENSMUST00000030586 Pick1Q62083 416 aa11.49□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 N4bp1Q6A037 893 aa11.49□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Fbxo22Q78JE5 402 aa11.49□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Tecpr1Q80VP0 1166 aa11.49□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Vmn2r43Q80Z08 845 aa11.49□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Rbm22Q8BHS3 420 aaKnown RBP11.49□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Klf8Q8BLM0 355 aaKnown RBP11.49□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Usp43Q8BUM9 1132 aa11.49□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Uba6Q8C7R4 1053 aa11.49□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Crispld1Q8CGD2 500 aa11.49□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 BmperQ8CJ69 685 aa11.49□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Mkl1Q8K4J6 964 aa11.49□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 RtbdnQ8QZY4 247 aa11.49□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Lrrc42Q8R2U7 421 aa11.49□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Vps18Q8R307 973 aa11.49□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Nup58Q8R332 587 aa11.49□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Neto1Q8R4I7 533 aa11.49□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Olfr1176Q8VG40 315 aa11.49□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Impa2Q91UZ5 290 aa11.49□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Themis2Q91YX0 663 aa11.49□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Ddx27Q921N6 760 aaKnown RBP11.49□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Stard13Q923Q2 1113 aa11.49□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Rnf112Q96DY5 654 aa11.49□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Mat2bQ99LB6 334 aa11.49□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 PigkQ9CXY9 395 aa11.49□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 NvlQ9DBY8 855 aaKnown RBP11.49□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Vwa7Q9JHA8 891 aa11.49□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Magel2Q9QZ04 1284 aa11.49□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Tmem196V9GX04 182 aa11.49□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 AspgA0JNU3 564 aa11.48□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Card9A2AIV8 536 aa11.48□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Mgat4eA6H684 439 aa11.48□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Apol7bB1AQP7 369 aa11.48□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Fam46dB1ATX6 390 aa11.48□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Nsmce4aG3XA30 381 aa11.48□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Limk2O54785 638 aa11.48□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 ZfrO88532 1074 aaKnown RBP11.48□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 XlrP05531 208 aa11.48□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Timp2P25785 220 aa11.48□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Pdha1P35486 390 aaKnown RBP11.48□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Sycp3P70281 254 aa11.48□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Colec11Q3SXB8 272 aa11.48□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Mat2aQ3THS6 395 aaKnown RBP11.48□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Hvcn1Q3U2S8 269 aa11.48□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Q3UY34 256 aa11.48□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Apol7eQ3UZ24 369 aa11.48□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Orc2Q60862 576 aaKnown RBP11.48□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Tfdp2Q64163 446 aa11.48□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Znf513Q6PD29 541 aa11.48□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Cdc14bQ6PFY9 485 aa11.48□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Cand2Q6ZQ73 1235 aa11.48□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Defb14Q7TNV9 67 aa11.48□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 AdalQ80SY6 360 aa11.48□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Rnaseh2bQ80ZV0 308 aa11.48□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Pdk1Q8BFP9 434 aaKnown RBP11.48□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Dtd2Q8BHA3 168 aa11.48□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Rspo4Q8BJ73 228 aa11.48□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Trmt2bQ8BQJ6 493 aa11.48□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Cmtr2Q8BWQ4 767 aa11.48□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Ppm1kQ8BXN7 372 aa11.48□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Trip10Q8CJ53 603 aa11.48□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Dync1li1Q8R1Q8 523 aa11.48□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Epsti1Q8VDI1 314 aa11.48□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Mtfr2Q8VED8 361 aa11.48□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Olfr665Q8VG79 316 aa11.48□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Asb18Q8VHA6 467 aa11.48□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 NoboxQ8VIH1 527 aa11.48□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 FdpsQ920E5 353 aa11.48□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Trem2Q99NH8 227 aa11.48□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Stx17Q9D0I4 301 aa11.48□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Duoxa2Q9D311 320 aa11.48□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Fam83dQ9D7I8 585 aa11.48□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Fundc1Q9DB70 155 aa11.48□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Elf2Q9JHC9 593 aa11.48□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 ThegQ9JMB1 375 aa11.48□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Mnx1Q9QZW9 404 aa11.48□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Cyb561d2Q9WUE3 222 aa11.48□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 MgaA2AWL7 3003 aaKnown RBP11.48□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Tdrd6P61407 2134 aa11.47□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Faap100A2ACJ2 879 aa11.47□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Srp54bE9PXC0 504 aa11.47□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Vmn1r39G3UWE6 305 aa11.47□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Vmn2r70K7N702 854 aa11.47□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Sult3a1O35403 293 aa11.47□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Dnajb5O89114 348 aa11.47□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Mucl2P02815 138 aa11.47□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Wnt1P04426 370 aa11.47□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Nap1l1P28656 391 aaKnown RBP11.47□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Dynlt1P51807 113 aa11.47□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Gmeb2P58929 530 aa11.47□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 RnaselQ05921 735 aa11.47□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 NeblQ0II04 452 aa11.47□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Gpatch4Q3TFK5 415 aaKnown RBP11.47□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 CenplQ3U3S3 329 aa11.47□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Gm527Q4KL13 310 aa11.47□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Anp32cQ64G17 123 aa11.47□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Panx2Q6IMP4 677 aa11.47□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Ntrk3Q6VNS1 825 aa11.47□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Dsg1bQ7TSF1 1060 aa11.47□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Wnk4Q80UE6 1222 aa11.47□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 27.4 ms