RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Use1Q9CQ56 270 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Padi4Q9Z183 666 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Zscan4eA0A1B0GRE8 505 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Zscan4bE9Q3G0 505 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Tuba1bP05213 451 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 PenkP22005 268 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Tuba1aP68369 451 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Tbx1P70323 479 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Fndc11Q80WB0 326 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Psd4Q8BLR5 1005 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Mettl3Q8C3P7 580 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Wdr11Q8K1X1 1223 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Cdc16Q8R349 620 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Brd8Q8R3B7 951 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 WwoxQ91WL8 414 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Q922M7 232 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Slc15a2Q9ES07 729 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Rgs1Q9JL25 209 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Wnt8bQ9WUD6 350 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Gm20911A0A087WSS0 222 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Zfp563B8JJZ9 448 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Matn2O08746 956 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Sema6bO54951 886 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Hpcal1P62748 193 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Gdpgp1Q3TLS3 386 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Cdc14bQ6PFY9 485 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Mri1Q9CQT1 369 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Serpini2Q9JK88 405 aa10.22□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Kifc5bE9PUA5 672 aa10.21□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Gm20695H3BLK7 282 aa10.21□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Reps1O54916 795 aa10.21□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Rc3h2P0C090 1187 aaKnown RBP10.21□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Jak1P52332 1153 aa10.21□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Q3UE31 404 aa10.21□□□□□ -0.77
Ubr1-201ENSMUST00000028728 SpidrQ8BGX7 933 aa10.21□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Nod1Q8BHB0 953 aa10.21□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Slc41a1Q8BJA2 512 aa10.21□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Parp12Q8BZ20 711 aaKnown RBP10.21□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Gpihbp1Q9D1N2 228 aa10.21□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Kat8Q9D1P2 458 aa10.21□□□□□ -0.77
Ubr1-201ENSMUST00000028728 4930524N10RikQ9D519 233 aa10.21□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Mmp15O54732 657 aa10.21□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Mybpc3O70468 1270 aaKnown RBP10.21□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Magea5O89009 320 aa10.21□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Magea8O89012 320 aa10.21□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Htr5bP31387 370 aa10.21□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Pdcd5P56812 126 aa10.21□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Npy2rP97295 381 aa10.21□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Zfp935Q14DI0 353 aa10.21□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Magea3Q6T340 320 aa10.21□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Rdh12Q8BYK4 316 aa10.21□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Tmcc3Q8R310 477 aa10.21□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Dcp2Q9CYC6 422 aa10.21□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Actrt2Q9D9L5 377 aa10.21□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Dyrk1bQ9Z188 629 aa10.21□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Kif20bQ80WE4 1774 aaKnown RBP10.21□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Cyp2a22B2RXZ2 492 aa10.21□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Fkbp7O54998 218 aa10.21□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Cyp2a4P15392 494 aa10.21□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Cyp2a5P20852 494 aa10.21□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Creb1Q01147 341 aaKnown RBP10.21□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Msx2Q03358 267 aa10.21□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Tmsb15lQ8C0W0 80 aa10.21□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Olfr1361Q8VFH0 317 aa10.21□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Sh3d19Q91X43 789 aa10.21□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Kbtbd12Q9D618 625 aa10.21□□□□□ -0.77
Ubr1-201ENSMUST00000028728 DcpsQ9DAR7 338 aa10.21□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Cyp3a44Q9EQW4 504 aa10.21□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Tll2Q9WVM6 1012 aa10.21□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Tex28B1AYN9 409 aa10.21□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Gm281D3Z1Y0 860 aa10.21□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Vmn2r4K7N784 913 aa10.21□□□□□ -0.78
Ubr1-201ENSMUST00000028728 AladP10518 330 aa10.21□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Cd86P42082 309 aa10.21□□□□□ -0.78
Ubr1-201ENSMUST00000028728 SykP48025 629 aa10.21□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Mxd4Q60948 209 aa10.21□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Slc13a3Q91Y63 600 aa10.21□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Tmem246Q91YV9 403 aa10.21□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Emc3Q99KI3 261 aa10.21□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Dusp21Q9D9D8 189 aa10.21□□□□□ -0.78
Ubr1-201ENSMUST00000028728 CtsrQ9JIA9 334 aa10.21□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Ggt5Q9Z2A9 573 aa10.21□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Mkrn2osD3Z393 217 aa10.21□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Gm45837F7D3W5 961 aa10.21□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Kng1O08677 661 aa10.21□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Itgb3O54890 787 aa10.21□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Apba3O88888 571 aa10.21□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Csf1rP09581 977 aa10.21□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Syt4P40749 425 aa10.21□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Mxd1P50538 227 aa10.21□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Psme2P97372 239 aa10.21□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Lrfn1Q2WF71 766 aa10.21□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Fam126aQ6P9N1 521 aa10.21□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Mief1Q8BGV8 463 aa10.21□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Tmem260Q8BMD6 703 aa10.21□□□□□ -0.78
Ubr1-201ENSMUST00000028728 SowahcQ8C0J6 512 aa10.21□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Tmem161bQ8C2L6 487 aa10.21□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Sh3glb2Q8R3V5 400 aa10.21□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Havcr2Q8VIM0 281 aa10.21□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Pde2aQ922S4 916 aa10.21□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 21.9 ms