RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 PcnaP17918 261 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Akr1c6P70694 323 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Ndst1Q3UHN9 882 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Mpzl3Q3V3F6 237 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Gm5800Q497L3 186 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Kcnh1Q60603 989 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 PnocQ64387 187 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Phf24Q80TL4 400 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Grik4Q8BMF5 956 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Fam53cQ8BXQ8 393 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Rdh13Q8CEE7 334 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Tbc1d14Q8CGA2 694 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Pih1d2Q8CHR9 315 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Celf3Q8CIN6 465 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Cxxc5Q91WA4 317 aaKnown RBP9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Rnf135Q9CWS1 417 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Cops7aQ9CZ04 275 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 AenQ9CZI9 336 aaKnown RBP9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 PorcnQ9JJJ7 461 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Trim10Q9WUH5 489 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Zfyve16Q80U44 1528 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Glipr1l3A0A1W2P7V2 236 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Phf11A6H5X4 337 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Vmn2r27D3YUK6 857 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Vmn2r73D3Z7M3 851 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Ccdc149F6V035 524 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Gm6465F7A7Y6 181 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 H2-AaP01910 256 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 PenkP22005 268 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 FechP22315 420 aaKnown RBP9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 DctP29812 517 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Sesn1P58006 492 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 GaaP70699 953 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Smim24Q0VG18 120 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Gm11437Q5QR91 290 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Nr1d2Q60674 576 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Tmem45aQ60774 273 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Znf280cQ6P3Y5 742 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Trpv1Q704Y3 839 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Q810M1 233 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Ap3s2Q8BSZ2 193 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Acap1Q8K2H4 740 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Kctd5Q8VC57 234 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Itm2cQ91VK4 269 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Dqx1Q924H9 718 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Rtfdc1Q99K95 307 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Ergic2Q9CR89 377 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Commd8Q9CZG3 183 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Mrpl28Q9D1B9 257 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Serpini2Q9JK88 405 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Grm3Q9QYS2 879 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Scnn1bQ9WU38 638 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 RykQ01887 594 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Sema3cQ62181 751 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 HpseQ6YGZ1 535 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Slc39a4Q78IQ7 660 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Olfr293Q7TS10 336 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Exoc3l1Q8BI71 739 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Csgalnact1Q8BJQ9 530 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Slc9a9Q8BZ00 644 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Ftsj1Q8CBC7 324 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Dmtf1Q8CE22 761 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Pdcd10Q8VE70 212 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 HlcsQ920N2 722 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Krt88Q9CPR6 171 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Wdr64Q9D565 1086 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Iigp1Q9QZ85 413 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Atp6ap1Q9R1Q9 463 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Arid3bQ9Z1N7 568 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Ttc7bE9Q6P5 843 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Scgb2b19J3QM75 112 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Folh1O35409 752 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Azin1O35484 448 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Il27raO70394 623 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Aak1Q3UHJ0 959 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Tapt1Q4VBD2 564 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Gba2Q69ZF3 918 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Vps9d1Q8C190 649 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Gulp1Q8K2A1 304 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Mcoln3Q8R4F0 553 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Zfp61Q923D1 555 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Chmp1b2Q9CQD4 199 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Nos1apQ9D3A8 503 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Cntd1Q9D995 334 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Gpc1Q9QZF2 557 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Vnn1Q9Z0K8 512 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Tbc1d16A2ABG4 766 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Ptchd4B9EKX1 904 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Cyp2t4E9PWV0 503 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Glyatl3E9Q5L8 290 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Apba3O88888 571 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Eif5aP63242 154 aaKnown RBP9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Npr3P70180 536 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Serpina3gQ5I2A0 440 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 UnkQ8BL48 810 aaKnown RBP9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Lpcat2Q8BYI6 544 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Nuak2Q8BZN4 639 aa9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Rbm34Q8C5L7 375 aaKnown RBP9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Ppwd1Q8CEC6 646 aaKnown RBP9.22□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Samd14Q8K070 417 aa9.22□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 17.5 ms