RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 SIX5Q8N196 739 aa13.29□□□□□ -0.28
PHGDH-221ENST00000641573 BBS5Q8N3I7 341 aa13.29□□□□□ -0.28
PHGDH-221ENST00000641573 DNAAF3Q8N9W5 541 aa13.29□□□□□ -0.28
PHGDH-221ENST00000641573 IPMKQ8NFU5 416 aa13.29□□□□□ -0.28
PHGDH-221ENST00000641573 WFDC5Q8TCV5 224 aa13.29□□□□□ -0.28
PHGDH-221ENST00000641573 FBF1Q8TES7 1133 aa13.29□□□□□ -0.28
PHGDH-221ENST00000641573 STAMBPL1Q96FJ0 436 aa13.29□□□□□ -0.28
PHGDH-221ENST00000641573 PKNOX2Q96KN3 472 aa13.29□□□□□ -0.28
PHGDH-221ENST00000641573 ATP6V1G3Q96LB4 118 aa13.29□□□□□ -0.28
PHGDH-221ENST00000641573 TBL1YQ9BQ87 522 aa13.29□□□□□ -0.28
PHGDH-221ENST00000641573 APOL2Q9BQE5 337 aa13.29□□□□□ -0.28
PHGDH-221ENST00000641573 FEM1AQ9BSK4 669 aa13.29□□□□□ -0.28
PHGDH-221ENST00000641573 FICDQ9BVA6 458 aa13.29□□□□□ -0.28
PHGDH-221ENST00000641573 KIF9Q9HAQ2 790 aa13.29□□□□□ -0.28
PHGDH-221ENST00000641573 DLL3Q9NYJ7 618 aa13.29□□□□□ -0.28
PHGDH-221ENST00000641573 PLK2Q9NYY3 685 aa13.29□□□□□ -0.28
PHGDH-221ENST00000641573 TBC1D14Q9P2M4 693 aa13.29□□□□□ -0.28
PHGDH-221ENST00000641573 SEPT3Q9UH03 358 aa13.29□□□□□ -0.28
PHGDH-221ENST00000641573 RABGEF1Q9UJ41 708 aa13.29□□□□□ -0.28
PHGDH-221ENST00000641573 OR51B4Q9Y5P0 310 aa13.29□□□□□ -0.28
PHGDH-221ENST00000641573 ACTL7AQ9Y615 435 aa13.29□□□□□ -0.28
PHGDH-221ENST00000641573 R4GN57 208 aa13.29□□□□□ -0.28
PHGDH-221ENST00000641573 DNAH14Q0VDD8 3507 aa13.29□□□□□ -0.28
PHGDH-221ENST00000641573 HELZP42694 1942 aaKnown RBP13.29□□□□□ -0.28
PHGDH-221ENST00000641573 CEP250Q9BV73 2442 aa13.28□□□□□ -0.28
PHGDH-221ENST00000641573 EXOC1LA0A1B0GW35 172 aa13.28□□□□□ -0.28
PHGDH-221ENST00000641573 HMGB1P1B2RPK0 211 aaPredicted RBP13.28□□□□□ -0.28
PHGDH-221ENST00000641573 AP3B1O00203 1094 aa13.28□□□□□ -0.28
PHGDH-221ENST00000641573 MUSKO15146 869 aa13.28□□□□□ -0.28
PHGDH-221ENST00000641573 SNAP91O60641 907 aa13.28□□□□□ -0.28
PHGDH-221ENST00000641573 ZMPSTE24O75844 475 aa13.28□□□□□ -0.28
PHGDH-221ENST00000641573 AGTP01019 485 aa13.28□□□□□ -0.28
PHGDH-221ENST00000641573 ADRA1AP35348 466 aa13.28□□□□□ -0.28
PHGDH-221ENST00000641573 CD86P42081 329 aa13.28□□□□□ -0.28
PHGDH-221ENST00000641573 NPY2RP49146 381 aa13.28□□□□□ -0.28
PHGDH-221ENST00000641573 ARF5P84085 180 aa13.28□□□□□ -0.28
PHGDH-221ENST00000641573 DSC2Q02487 901 aa13.28□□□□□ -0.28
PHGDH-221ENST00000641573 CDH17Q12864 832 aa13.28□□□□□ -0.28
PHGDH-221ENST00000641573 RFTN1Q14699 578 aaPredicted RBP13.28□□□□□ -0.28
PHGDH-221ENST00000641573 CYTH1Q15438 398 aa13.28□□□□□ -0.28
PHGDH-221ENST00000641573 KCTD16Q68DU8 428 aa13.28□□□□□ -0.28
PHGDH-221ENST00000641573 CASC4Q6P4E1 433 aa13.28□□□□□ -0.28
PHGDH-221ENST00000641573 KDELC1Q6UW63 502 aa13.28□□□□□ -0.28
PHGDH-221ENST00000641573 TMEM25Q86YD3 366 aa13.28□□□□□ -0.28
PHGDH-221ENST00000641573 CELF5Q8N6W0 485 aaKnown RBP13.28□□□□□ -0.28
PHGDH-221ENST00000641573 FIBINQ8TAL6 211 aa13.28□□□□□ -0.28
PHGDH-221ENST00000641573 ARRDC2Q8TBH0 407 aa13.28□□□□□ -0.28
PHGDH-221ENST00000641573 ALG14Q96F25 216 aa13.28□□□□□ -0.28
PHGDH-221ENST00000641573 PGM2Q96G03 612 aa13.28□□□□□ -0.28
PHGDH-221ENST00000641573 MRGPRX2Q96LB1 330 aa13.28□□□□□ -0.28
PHGDH-221ENST00000641573 CINPQ9BW66 212 aaPredicted RBP13.28□□□□□ -0.28
PHGDH-221ENST00000641573 POLR1EQ9GZS1 481 aaKnown RBP13.28□□□□□ -0.28
PHGDH-221ENST00000641573 LINC00597Q9H2U6 94 aa13.28□□□□□ -0.28
PHGDH-221ENST00000641573 HAUS2Q9NVX0 235 aa13.28□□□□□ -0.28
PHGDH-221ENST00000641573 SYBUQ9NX95 663 aa13.28□□□□□ -0.28
PHGDH-221ENST00000641573 BFARQ9NZS9 450 aa13.28□□□□□ -0.28
PHGDH-221ENST00000641573 KIAA1522Q9P206 1035 aaPredicted RBP13.28□□□□□ -0.28
PHGDH-221ENST00000641573 VPS18Q9P253 973 aa13.28□□□□□ -0.28
PHGDH-221ENST00000641573 VPS28Q9UK41 221 aa13.28□□□□□ -0.28
PHGDH-221ENST00000641573 CLEC4EQ9ULY5 219 aa13.28□□□□□ -0.28
PHGDH-221ENST00000641573 DENND4AQ7Z401 1863 aa13.27□□□□□ -0.28
PHGDH-221ENST00000641573 CACNA1GO43497 2377 aa13.27□□□□□ -0.29
PHGDH-221ENST00000641573 TTC24A2A3L6 582 aaPredicted RBP13.27□□□□□ -0.29
PHGDH-221ENST00000641573 POC1B-GALNT4F8VUJ3 575 aa13.27□□□□□ -0.29
PHGDH-221ENST00000641573 SLC9A3R1O14745 358 aaPredicted RBP13.27□□□□□ -0.29
PHGDH-221ENST00000641573 RGS16O15492 202 aaPredicted RBP13.27□□□□□ -0.29
PHGDH-221ENST00000641573 PENKP01210 267 aaPredicted RBP13.27□□□□□ -0.29
PHGDH-221ENST00000641573 MMP2P08253 660 aa13.27□□□□□ -0.29
PHGDH-221ENST00000641573 PGAM1P18669 254 aa13.27□□□□□ -0.29
PHGDH-221ENST00000641573 STX2P32856 288 aa13.27□□□□□ -0.29
PHGDH-221ENST00000641573 WNT3AP56704 352 aa13.27□□□□□ -0.29
PHGDH-221ENST00000641573 CRADDP78560 199 aa13.27□□□□□ -0.29
PHGDH-221ENST00000641573 CBX1P83916 185 aa13.27□□□□□ -0.29
PHGDH-221ENST00000641573 SKOR1P84550 965 aa13.27□□□□□ -0.29
PHGDH-221ENST00000641573 LMAN2Q12907 356 aa13.27□□□□□ -0.29
PHGDH-221ENST00000641573 SKIDA1Q1XH10 827 aa13.27□□□□□ -0.29
PHGDH-221ENST00000641573 KLHL38Q2WGJ6 581 aa13.27□□□□□ -0.29
PHGDH-221ENST00000641573 STEAP4Q687X5 459 aa13.27□□□□□ -0.29
PHGDH-221ENST00000641573 UNC5AQ6ZN44 842 aa13.27□□□□□ -0.29
PHGDH-221ENST00000641573 CCNJLQ8IV13 435 aa13.27□□□□□ -0.29
PHGDH-221ENST00000641573 NPAS3Q8IXF0 933 aa13.27□□□□□ -0.29
PHGDH-221ENST00000641573 APCDD1Q8J025 514 aa13.27□□□□□ -0.29
PHGDH-221ENST00000641573 SH2D3CQ8N5H7 860 aa13.27□□□□□ -0.29
PHGDH-221ENST00000641573 DCAF4L2Q8NA75 395 aa13.27□□□□□ -0.29
PHGDH-221ENST00000641573 IRF7Q92985 503 aa13.27□□□□□ -0.29
PHGDH-221ENST00000641573 TADA1Q96BN2 335 aa13.27□□□□□ -0.29
PHGDH-221ENST00000641573 OTUB2Q96DC9 234 aa13.27□□□□□ -0.29
PHGDH-221ENST00000641573 PSKH2Q96QS6 385 aa13.27□□□□□ -0.29
PHGDH-221ENST00000641573 XPO6Q96QU8 1125 aaKnown RBP13.27□□□□□ -0.29
PHGDH-221ENST00000641573 SEMA3CQ99985 751 aa13.27□□□□□ -0.29
PHGDH-221ENST00000641573 NAT9Q9BTE0 207 aa13.27□□□□□ -0.29
PHGDH-221ENST00000641573 ACSS3Q9H6R3 686 aa13.27□□□□□ -0.29
PHGDH-221ENST00000641573 PLAC1Q9HBJ0 212 aa13.27□□□□□ -0.29
PHGDH-221ENST00000641573 VPS45Q9NRW7 570 aa13.27□□□□□ -0.29
PHGDH-221ENST00000641573 DUSP12Q9UNI6 340 aa13.27□□□□□ -0.29
PHGDH-221ENST00000641573 NOVA2Q9UNW9 492 aaKnown RBP13.27□□□□□ -0.29
PHGDH-221ENST00000641573 WNT6Q9Y6F9 365 aa13.27□□□□□ -0.29
PHGDH-221ENST00000641573 DOCK6Q96HP0 2047 aa13.27□□□□□ -0.29
PHGDH-221ENST00000641573 TCRBV9S1A1TA0A576 114 aa13.26□□□□□ -0.29
PHGDH-221ENST00000641573 CD160O95971 181 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms