RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 PFKLP17858 780 aa17.47■□□□□ 0.39
PHGDH-208ENST00000641023 HLA-DPA1P20036 260 aa17.47■□□□□ 0.39
PHGDH-208ENST00000641023 CES1P23141 567 aa17.47■□□□□ 0.39
PHGDH-208ENST00000641023 SERPINB8P50452 374 aa17.47■□□□□ 0.39
PHGDH-208ENST00000641023 THOC5Q13769 683 aaKnown RBP17.47■□□□□ 0.39
PHGDH-208ENST00000641023 PDE1CQ14123 709 aaPredicted RBP17.47■□□□□ 0.39
PHGDH-208ENST00000641023 IHHQ14623 411 aa17.47■□□□□ 0.39
PHGDH-208ENST00000641023 PPM1LQ5SGD2 360 aa17.47■□□□□ 0.39
PHGDH-208ENST00000641023 KIAA0930Q6ICG6 404 aaPredicted RBP17.47■□□□□ 0.39
PHGDH-208ENST00000641023 CCDC121Q6ZUS5 278 aa17.47■□□□□ 0.39
PHGDH-208ENST00000641023 CNTN4Q8IWV2 1026 aa17.47■□□□□ 0.39
PHGDH-208ENST00000641023 CARNMT1Q8N4J0 409 aa17.47■□□□□ 0.39
PHGDH-208ENST00000641023 DCLK2Q8N568 766 aa17.47■□□□□ 0.39
PHGDH-208ENST00000641023 TTC16Q8NEE8 873 aa17.47■□□□□ 0.39
PHGDH-208ENST00000641023 ARMC2Q8NEN0 867 aa17.47■□□□□ 0.39
PHGDH-208ENST00000641023 MICAL1Q8TDZ2 1067 aa17.47■□□□□ 0.39
PHGDH-208ENST00000641023 PTPRN2Q92932 1015 aa17.47■□□□□ 0.39
PHGDH-208ENST00000641023 ISL2Q96A47 359 aa17.47■□□□□ 0.39
PHGDH-208ENST00000641023 ATXN7L3BQ96GX2 97 aa17.47■□□□□ 0.39
PHGDH-208ENST00000641023 FEM1CQ96JP0 617 aa17.47■□□□□ 0.39
PHGDH-208ENST00000641023 CORO1BQ9BR76 489 aa17.47■□□□□ 0.39
PHGDH-208ENST00000641023 SLCO1B3Q9NPD5 702 aa17.47■□□□□ 0.39
PHGDH-208ENST00000641023 TLR9Q9NR96 1032 aa17.47■□□□□ 0.39
PHGDH-208ENST00000641023 RRP15Q9Y3B9 282 aaKnown RBP17.47■□□□□ 0.39
PHGDH-208ENST00000641023 SH3BP1Q9Y3L3 701 aa17.47■□□□□ 0.39
PHGDH-208ENST00000641023 CSPG5O95196 566 aa17.46■□□□□ 0.39
PHGDH-208ENST00000641023 PAPSS2O95340 614 aaPredicted RBP17.46■□□□□ 0.39
PHGDH-208ENST00000641023 MYL4P12829 197 aa17.46■□□□□ 0.39
PHGDH-208ENST00000641023 GLDCP23378 1020 aa17.46■□□□□ 0.39
PHGDH-208ENST00000641023 ARCN1P48444 511 aaKnown RBP17.46■□□□□ 0.39
PHGDH-208ENST00000641023 SLC14A2Q15849 920 aa17.46■□□□□ 0.39
PHGDH-208ENST00000641023 INSCQ1MX18 579 aa17.46■□□□□ 0.39
PHGDH-208ENST00000641023 SIRPB2Q5JXA9 342 aa17.46■□□□□ 0.39
PHGDH-208ENST00000641023 HTR3DQ70Z44 454 aa17.46■□□□□ 0.39
PHGDH-208ENST00000641023 RTL10Q7L3V2 364 aa17.46■□□□□ 0.39
PHGDH-208ENST00000641023 NLRP9Q7RTR0 991 aa17.46■□□□□ 0.39
PHGDH-208ENST00000641023 TRIM42Q8IWZ5 723 aa17.46■□□□□ 0.39
PHGDH-208ENST00000641023 OTUD6BQ8N6M0 293 aa17.46■□□□□ 0.39
PHGDH-208ENST00000641023 CCDC63Q8NA47 563 aa17.46■□□□□ 0.39
PHGDH-208ENST00000641023 SNX15Q9NRS6 342 aa17.46■□□□□ 0.39
PHGDH-208ENST00000641023 KLHL14Q9P2G3 628 aa17.46■□□□□ 0.39
PHGDH-208ENST00000641023 ARL2BPQ9Y2Y0 163 aa17.46■□□□□ 0.39
PHGDH-208ENST00000641023 SCAMP3O14828 347 aaKnown RBP17.46■□□□□ 0.39
PHGDH-208ENST00000641023 LUC7L3O95232 432 aaKnown RBP17.46■□□□□ 0.39
PHGDH-208ENST00000641023 FGF1P05230 155 aa17.46■□□□□ 0.39
PHGDH-208ENST00000641023 ATXN1LP0C7T5 689 aaKnown RBP17.46■□□□□ 0.39
PHGDH-208ENST00000641023 UBE3AQ05086 875 aa17.46■□□□□ 0.39
PHGDH-208ENST00000641023 CDH18Q13634 790 aa17.46■□□□□ 0.39
PHGDH-208ENST00000641023 LAMB3Q13751 1172 aa17.46■□□□□ 0.39
PHGDH-208ENST00000641023 RNF187Q5TA31 235 aaPredicted RBP17.46■□□□□ 0.39
PHGDH-208ENST00000641023 FAM217AQ8IXS0 508 aa17.46■□□□□ 0.39
PHGDH-208ENST00000641023 SPPL3Q8TCT6 385 aa17.46■□□□□ 0.39
PHGDH-208ENST00000641023 VPS39Q96JC1 886 aa17.46■□□□□ 0.39
PHGDH-208ENST00000641023 MCMBPQ9BTE3 642 aa17.46■□□□□ 0.39
PHGDH-208ENST00000641023 SLC2A6Q9UGQ3 507 aa17.46■□□□□ 0.39
PHGDH-208ENST00000641023 PLXNA4Q9HCM2 1894 aa17.45■□□□□ 0.38
PHGDH-208ENST00000641023 CCL16O15467 120 aa17.45■□□□□ 0.38
PHGDH-208ENST00000641023 MPOP05164 745 aa17.45■□□□□ 0.38
PHGDH-208ENST00000641023 CLCN4P51793 760 aa17.45■□□□□ 0.38
PHGDH-208ENST00000641023 MSLNQ13421 630 aaPredicted RBP17.45■□□□□ 0.38
PHGDH-208ENST00000641023 TSTD2Q5T7W7 516 aa17.45■□□□□ 0.38
PHGDH-208ENST00000641023 CGB2Q6NT52 195 aa17.45■□□□□ 0.38
PHGDH-208ENST00000641023 CALML6Q8TD86 181 aa17.45■□□□□ 0.38
PHGDH-208ENST00000641023 FAM167BQ9BTA0 163 aa17.45■□□□□ 0.38
PHGDH-208ENST00000641023 MCOLN1Q9GZU1 580 aa17.45■□□□□ 0.38
PHGDH-208ENST00000641023 RHOJQ9H4E5 214 aa17.45■□□□□ 0.38
PHGDH-208ENST00000641023 MTO1Q9Y2Z2 717 aaKnown RBP17.45■□□□□ 0.38
PHGDH-208ENST00000641023 ACTL7AQ9Y615 435 aa17.45■□□□□ 0.38
PHGDH-208ENST00000641023 GFRA2O00451 464 aa17.44■□□□□ 0.38
PHGDH-208ENST00000641023 KLF11O14901 512 aa17.44■□□□□ 0.38
PHGDH-208ENST00000641023 INSIG1O15503 277 aa17.44■□□□□ 0.38
PHGDH-208ENST00000641023 GJB3O75712 270 aa17.44■□□□□ 0.38
PHGDH-208ENST00000641023 SYN1P17600 705 aa17.44■□□□□ 0.38
PHGDH-208ENST00000641023 ARNTP27540 789 aa17.44■□□□□ 0.38
PHGDH-208ENST00000641023 MAGEA12P43365 314 aa17.44■□□□□ 0.38
PHGDH-208ENST00000641023 SCNN1BP51168 640 aa17.44■□□□□ 0.38
PHGDH-208ENST00000641023 FSCBQ5H9T9 825 aa17.44■□□□□ 0.38
PHGDH-208ENST00000641023 FYB2Q5VWT5 728 aa17.44■□□□□ 0.38
PHGDH-208ENST00000641023 CPXM2Q8N436 756 aa17.44■□□□□ 0.38
PHGDH-208ENST00000641023 DDI1Q8WTU0 396 aa17.44■□□□□ 0.38
PHGDH-208ENST00000641023 SLC22A17Q8WUG5 538 aa17.44■□□□□ 0.38
PHGDH-208ENST00000641023 FEM1AQ9BSK4 669 aa17.44■□□□□ 0.38
PHGDH-208ENST00000641023 CFAP97Q9P2B7 532 aa17.44■□□□□ 0.38
PHGDH-208ENST00000641023 VPS28Q9UK41 221 aa17.44■□□□□ 0.38
PHGDH-208ENST00000641023 PRDM4Q9UKN5 801 aa17.44■□□□□ 0.38
PHGDH-208ENST00000641023 LINC01553A4QN01 128 aa17.44■□□□□ 0.38
PHGDH-208ENST00000641023 CCT8L1PA6NM43 557 aa17.44■□□□□ 0.38
PHGDH-208ENST00000641023 BIRC5O15392 142 aa17.44■□□□□ 0.38
PHGDH-208ENST00000641023 SIN3BO75182 1162 aa17.44■□□□□ 0.38
PHGDH-208ENST00000641023 FGF19O95750 216 aa17.44■□□□□ 0.38
PHGDH-208ENST00000641023 AHSGP02765 367 aa17.44■□□□□ 0.38
PHGDH-208ENST00000641023 GJA1P17302 382 aa17.44■□□□□ 0.38
PHGDH-208ENST00000641023 DNAJB1P25685 340 aa17.44■□□□□ 0.38
PHGDH-208ENST00000641023 ARF5P84085 180 aa17.44■□□□□ 0.38
PHGDH-208ENST00000641023 INO80DQ53TQ3 878 aaPredicted RBP17.44■□□□□ 0.38
PHGDH-208ENST00000641023 ATG16L1Q676U5 607 aa17.44■□□□□ 0.38
PHGDH-208ENST00000641023 OTOAQ7RTW8 1153 aa17.44■□□□□ 0.38
PHGDH-208ENST00000641023 CMC1Q7Z7K0 106 aa17.44■□□□□ 0.38
PHGDH-208ENST00000641023 ZC3HC1Q86WB0 502 aaKnown RBP17.44■□□□□ 0.38
PHGDH-208ENST00000641023 NUDCD3Q8IVD9 361 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms