RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 TOP3AQ13472 1001 aaPredicted RBP6.28□□□□□ -1.4
ATM-229ENST00000639953 MAMLD1Q13495 774 aa6.28□□□□□ -1.4
ATM-229ENST00000639953 KCNC3Q14003 757 aa6.28□□□□□ -1.4
ATM-229ENST00000639953 TAF5Q15542 800 aa6.28□□□□□ -1.4
ATM-229ENST00000639953 GPR19Q15760 415 aa6.28□□□□□ -1.4
ATM-229ENST00000639953 CYP4A22Q5TCH4 519 aa6.28□□□□□ -1.4
ATM-229ENST00000639953 CCDC181Q5TID7 509 aa6.28□□□□□ -1.4
ATM-229ENST00000639953 C9orf57Q5W0N0 161 aa6.28□□□□□ -1.4
ATM-229ENST00000639953 DUPD1Q68J44 220 aa6.28□□□□□ -1.4
ATM-229ENST00000639953 PLEKHA7Q6IQ23 1121 aa6.28□□□□□ -1.4
ATM-229ENST00000639953 KIAA1841Q6NSI8 718 aa6.28□□□□□ -1.4
ATM-229ENST00000639953 C8orf74Q6P047 294 aa6.28□□□□□ -1.4
ATM-229ENST00000639953 Q6ZSN1 163 aa6.28□□□□□ -1.4
ATM-229ENST00000639953 PTRH1Q86Y79 214 aaKnown RBP6.28□□□□□ -1.4
ATM-229ENST00000639953 CD302Q8IX05 232 aa6.28□□□□□ -1.4
ATM-229ENST00000639953 EFHBQ8N7U6 833 aa6.28□□□□□ -1.4
ATM-229ENST00000639953 C12orf76Q8N812 135 aaPredicted RBP6.28□□□□□ -1.4
ATM-229ENST00000639953 GLIS1Q8NBF1 620 aa6.28□□□□□ -1.4
ATM-229ENST00000639953 SLC4A11Q8NBS3 891 aa6.28□□□□□ -1.4
ATM-229ENST00000639953 C1orf131Q8NDD1 294 aaKnown RBP6.28□□□□□ -1.4
ATM-229ENST00000639953 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.28□□□□□ -1.4
ATM-229ENST00000639953 SLC22A17Q8WUG5 538 aa6.28□□□□□ -1.4
ATM-229ENST00000639953 C1orf54Q8WWF1 131 aa6.28□□□□□ -1.4
ATM-229ENST00000639953 CTNNBL1Q8WYA6 563 aaPredicted RBP6.28□□□□□ -1.4
ATM-229ENST00000639953 ATG4AQ8WYN0 398 aa6.28□□□□□ -1.4
ATM-229ENST00000639953 TAF4BQ92750 862 aa6.28□□□□□ -1.4
ATM-229ENST00000639953 CAVIN3Q969G5 261 aa6.28□□□□□ -1.4
ATM-229ENST00000639953 PABPC5Q96DU9 382 aaKnown RBP6.28□□□□□ -1.4
ATM-229ENST00000639953 PIWIL1Q96J94 861 aaKnown RBP6.28□□□□□ -1.4
ATM-229ENST00000639953 KLHL5Q96PQ7 755 aa6.28□□□□□ -1.4
ATM-229ENST00000639953 FNBP1Q96RU3 617 aa6.28□□□□□ -1.4
ATM-229ENST00000639953 SH3GL2Q99962 352 aa6.28□□□□□ -1.4
ATM-229ENST00000639953 CLSTN3Q9BQT9 956 aa6.28□□□□□ -1.4
ATM-229ENST00000639953 TTPALQ9BTX7 342 aa6.28□□□□□ -1.4
ATM-229ENST00000639953 TRIM31Q9BZY9 425 aa6.28□□□□□ -1.4
ATM-229ENST00000639953 PCED1AQ9H1Q7 454 aa6.28□□□□□ -1.4
ATM-229ENST00000639953 C10orf88Q9H8K7 445 aa6.28□□□□□ -1.4
ATM-229ENST00000639953 CISHQ9NSE2 258 aa6.28□□□□□ -1.4
ATM-229ENST00000639953 ZDHHC18Q9NUE0 388 aa6.28□□□□□ -1.4
ATM-229ENST00000639953 ARGLU1Q9NWB6 273 aaPredicted RBP6.28□□□□□ -1.4
ATM-229ENST00000639953 CDH22Q9UJ99 828 aa6.28□□□□□ -1.4
ATM-229ENST00000639953 SRPK3Q9UPE1 567 aa6.28□□□□□ -1.4
ATM-229ENST00000639953 DERAQ9Y315 318 aa6.28□□□□□ -1.4
ATM-229ENST00000639953 SNX24Q9Y343 169 aa6.28□□□□□ -1.4
ATM-229ENST00000639953 MTCL1Q9Y4B5 1905 aaKnown RBP6.28□□□□□ -1.4
ATM-229ENST00000639953 C2orf16Q68DN1 1984 aa6.27□□□□□ -1.4
ATM-229ENST00000639953 TMEM191CA6NGB0 347 aa6.27□□□□□ -1.41
ATM-229ENST00000639953 F8VP50 259 aa6.27□□□□□ -1.41
ATM-229ENST00000639953 PGRMC1O00264 195 aaKnown RBP6.27□□□□□ -1.41
ATM-229ENST00000639953 PIRO00625 290 aa6.27□□□□□ -1.41
ATM-229ENST00000639953 THAP12O43422 761 aa6.27□□□□□ -1.41
ATM-229ENST00000639953 XPOTO43592 962 aaKnown RBP6.27□□□□□ -1.41
ATM-229ENST00000639953 ERBB2P04626 1255 aa6.27□□□□□ -1.41
ATM-229ENST00000639953 KRT19P08727 400 aa6.27□□□□□ -1.41
ATM-229ENST00000639953 OR4Q2P0C623 313 aa6.27□□□□□ -1.41
ATM-229ENST00000639953 ETS1P14921 441 aa6.27□□□□□ -1.41
ATM-229ENST00000639953 IVDP26440 423 aa6.27□□□□□ -1.41
ATM-229ENST00000639953 CTNNA1P35221 906 aaKnown RBP6.27□□□□□ -1.41
ATM-229ENST00000639953 HSPA9P38646 679 aaKnown RBP6.27□□□□□ -1.41
ATM-229ENST00000639953 RPL21P46778 160 aaKnown RBP6.27□□□□□ -1.41
ATM-229ENST00000639953 CLCN4P51793 760 aa6.27□□□□□ -1.41
ATM-229ENST00000639953 ARPP19P56211 112 aa6.27□□□□□ -1.41
ATM-229ENST00000639953 LILRA4P59901 499 aa6.27□□□□□ -1.41
ATM-229ENST00000639953 GABPB1Q06547 395 aaPredicted RBP6.27□□□□□ -1.41
ATM-229ENST00000639953 FOXE3Q13461 319 aa6.27□□□□□ -1.41
ATM-229ENST00000639953 SNX1Q13596 522 aa6.27□□□□□ -1.41
ATM-229ENST00000639953 PRKD1Q15139 912 aaPredicted RBP6.27□□□□□ -1.41
ATM-229ENST00000639953 PSMD5Q16401 504 aa6.27□□□□□ -1.41
ATM-229ENST00000639953 TBR1Q16650 682 aa6.27□□□□□ -1.41
ATM-229ENST00000639953 PTPN20Q4JDL3 420 aa6.27□□□□□ -1.41
ATM-229ENST00000639953 SYCE2Q6PIF2 218 aa6.27□□□□□ -1.41
ATM-229ENST00000639953 DSTYKQ6XUX3 929 aa6.27□□□□□ -1.41
ATM-229ENST00000639953 B4GALNT4Q76KP1 1039 aa6.27□□□□□ -1.41
ATM-229ENST00000639953 MTDHQ86UE4 582 aaKnown RBP6.27□□□□□ -1.41
ATM-229ENST00000639953 PHF13Q86YI8 300 aaPredicted RBP6.27□□□□□ -1.41
ATM-229ENST00000639953 SLC13A5Q86YT5 568 aaPredicted RBP6.27□□□□□ -1.41
ATM-229ENST00000639953 WDR49Q8IV35 697 aa6.27□□□□□ -1.41
ATM-229ENST00000639953 SCUBE1Q8IWY4 988 aa6.27□□□□□ -1.41
ATM-229ENST00000639953 UBA3Q8TBC4 463 aa6.27□□□□□ -1.41
ATM-229ENST00000639953 EXTL1Q92935 676 aa6.27□□□□□ -1.41
ATM-229ENST00000639953 PPP2R3CQ969Q6 453 aa6.27□□□□□ -1.41
ATM-229ENST00000639953 ANKRD36BP1Q96IX9 119 aa6.27□□□□□ -1.41
ATM-229ENST00000639953 MSLNLQ96KJ4 702 aa6.27□□□□□ -1.41
ATM-229ENST00000639953 RPGRIP1Q96KN7 1286 aa6.27□□□□□ -1.41
ATM-229ENST00000639953 ASB2Q96Q27 587 aa6.27□□□□□ -1.41
ATM-229ENST00000639953 MRPL45Q9BRJ2 306 aaKnown RBP6.27□□□□□ -1.41
ATM-229ENST00000639953 TRIM55Q9BYV6 548 aa6.27□□□□□ -1.41
ATM-229ENST00000639953 KIAA1586Q9HCI6 787 aa6.27□□□□□ -1.41
ATM-229ENST00000639953 VPS18Q9P253 973 aa6.27□□□□□ -1.41
ATM-229ENST00000639953 ADAM21Q9UKJ8 722 aa6.27□□□□□ -1.41
ATM-229ENST00000639953 AGAP1Q9UPQ3 857 aa6.27□□□□□ -1.41
ATM-229ENST00000639953 NEU2Q9Y3R4 380 aa6.27□□□□□ -1.41
ATM-229ENST00000639953 C2CD2Q9Y426 696 aa6.27□□□□□ -1.41
ATM-229ENST00000639953 DAAM1Q9Y4D1 1078 aa6.27□□□□□ -1.41
ATM-229ENST00000639953 PCDHA9Q9Y5H5 950 aa6.27□□□□□ -1.41
ATM-229ENST00000639953 TRBV23-1A0A0A0MS06 115 aa6.26□□□□□ -1.41
ATM-229ENST00000639953 C3orf70A6NLC5 250 aaPredicted RBP6.26□□□□□ -1.41
ATM-229ENST00000639953 NPIPB8E9PQR5 432 aa6.26□□□□□ -1.41
ATM-229ENST00000639953 M0QZQ0 153 aa6.26□□□□□ -1.41
ATM-229ENST00000639953 CYB561D2O14569 222 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms